NO15G02440, NO15G02440 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02440 vs. NCBI_GenBank
Match: EWM22331.1 (Amino acid transporter, transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 620.9 bits (1600), Expect = 3.800e-174 Identity = 354/567 (62.43%), Postives = 409/567 (72.13%), Query Frame = 0
Query: 1 MIDEPKNSTPTPTNGINTNNDLILRLLPSFPATRSADDELPPHLFPLSSSFQPPIPSSSSSAFRGTKSPPKTLHWAMAGLILFSFTAPGALVSVPFAIGTTGYVLGMLVLCLFTAATCGGCLMLLEIYLAHPHCQNLPELGSVAIGGNGRWGRRMAATAQLCNFVGFLPVSMTINAFALQGTLGVNPEDSCLDVYILLISLVCLLTTQARVLTNTQSLALLSLGAILAAGGIQLGIAFSPXXXXXXXXXXXXXXXARFFGHPLLSSTILSTDIIRTFLGLTCMSWSFVPCFLVVELASSMPSPKLFPRSLLLAAXXXXXXXXXXXXXXXXXXXXDIPDPSYSFPSWPSSLPASRVMHALILLANLVSYALDSVPLVRYCQRVWKPRFDPTDWSLRAVGTYFLLSLPSFMFGVLAALVVGNLLALLAFVSALSVPWVTQILPALFYFKWRKRMSSLPPSSF---LSGRDHHSPWLLALPSPPPSFPPSSSSFSTSLAFAKPHILLPSEGKGGMHAPLSRKEKLLLVLVGGVGIVNFSICAAAAVGKVSVSELRGHTQIGCGTWTVYSD 565
MI EP TP+N + + DL+LR LP+ A SA+ +L PHL S PP SS +F TK P KTLHWAMAGLILFSFTAPGALVSVPFA+GTTGYVL +L+L LFTAAT GCLMLLEIY +P+CQNLPELG+VA+G GRR+AAT QL NFVGFLPVS+TINA ALQGTLGV PE SCLD YIL IS++CLL+TQAR L+NTQ+L+LLSL AILAAG IQLG+AFSP AR FGHPLL +T+++RT LG+TCM+WSFVPCFLVVELAS+MP+P FPR+L LAA D+PDPSY+ P+WP++ SRVMHAL+LLANLVSY LDSVPLVRYCQRVW+PRF+ DWS RA+G Y LLSLPSF+FGVLAALVVGNLLALLAFVSALSVPWVTQILPALFY WR+R+SS S+ S D W+LAL PP + +LLP GG+HAPLS KEK LLV V VG++NF ICAAAAVGKVS++ELRG TQIGCG WT+YSD
Sbjct: 1 MIQEP---DATPSN--DNSADLLLRFLPAGKA--SAESDL-PHLPYAPSGASPPRFHPSSHSFPTTK-PRKTLHWAMAGLILFSFTAPGALVSVPFAVGTTGYVLSLLILSLFTAATIAGCLMLLEIYQCNPYCQNLPELGAVAMGSVR--GRRLAATVQLSNFVGFLPVSLTINALALQGTLGVAPEHSCLDYYILGISVLCLLSTQARALSNTQALSLLSLTAILAAGAIQLGVAFSP--SLMPPLPSSPSSSARMFGHPLLPHASPATEVVRTLLGVTCMAWSFVPCFLVVELASAMPAPHHFPRALFLAAGLLFLLFLGVGFPLVHRWGWDLPDPSYALPAWPAAASVSRVMHALVLLANLVSYTLDSVPLVRYCQRVWRPRFNLQDWSPRALGLYLLLSLPSFLFGVLAALVVGNLLALLAFVSALSVPWVTQILPALFYHSWRRRLSSASSRSYAHPASAYDRPDDWILAL---PPXXXXXXXXXXXXSPLGRLSLLLPPPVAGGIHAPLSVKEKFLLVFVASVGVMNFLICAAAAVGKVSIAELRGKTQIGCGAWTLYSD 551
BLAST of NO15G02440 vs. NCBI_GenBank
Match: OLQ13954.1 (GDP-mannose transporter GONST4 [Symbiodinium microadriaticum]) HSP 1 Score: 203.8 bits (517), Expect = 1.500e-48 Identity = 154/494 (31.17%), Postives = 234/494 (47.37%), Query Frame = 0
Query: 75 WAMAGLILFSFTAPGALVSVPFAIGTTGYVLGMLVLCLFTAATCGGCLMLLEIYLAHPHCQNLPELGSVAIGGNGR-WGRRMAATAQLCNFVGFLPVSMTINAFALQ--GTLGVNPEDSCLDVYILLISLVCLLTTQARVLTNTQSLALLSLGAILAAGGIQLGIAFSPXXXXXXXXXXXXXXXARFFGHPLLSSTILSTDIIRTFLGLTCMSWSFVPCFLVVELASSMPSPKLFPRSLLLAAXXXXXXXXXXXXXXXXXXXXDIPDP---SYSFPSWPSSLPASRVMHALILLANLVSYALDSVPLVRYCQRVWKPRFDPTDWSLRAVGTYFLLSLPSFMFGVLAALVVGNLLALLAFVSALSVPWVTQILPALFYFKWRKRMSSLPPSSFLSGRDHHSPWLLALPSPPPSFPPSSSSFSTSLAFAKPHILLPSEGKGGMHAPLSRKEKLLLVLVGGVGIVNFSICAAAAVGKVSVSELRGHTQIGCGTWTVY 563
W AG+ +F+F AP A+++VPFAI GY GM + + T+A+ G MLLE+ L +PHC+ +LG IG + WG QL NF F+P ++ A +L GTLG P +C+D Y+ +I+ +CLLTTQ R N Q ++S ++ + AF A++FG+P ++ + +IR G T +W+F+P FL VEL++ M +P F +SLL+A ++ + + ++ + + +A L N VSY LDSVPL R+CQR W P F T W++ + Y SLP+F+ +L + ++ LL FV+AL+ PWVTQI PA+ Y+K R ++ + G+ P+ R EK+ + LV VG V+F CA AVG ++ ELR QIGC W ++
Sbjct: 507 WKQAGITVFTFAAPSAVMAVPFAIANAGYAGGMALCIILTSASVAGANMLLEMKLLYPHCKTFGDLGLEVIGRPAQMWGN----VIQLGNFCLFMPCALRFCALSLYSIGTLG--PLGNCIDYYVWVIAGICLLTTQVRSFNNVQGFTVISFLCVVGMVITMVIGAFQ--------YEHTPKVPAQWFGNPEPNAGL---RLIRLASGFTIGAWAFIPAFLTVELSTCMRNPADFKKSLLMAGSLNVLLFVIVGTTVVARWGYNVGEVIAITTGVGAFVKGDVINTLFNAFQLGGNFVSYMLDSVPLSRFCQRSWAPNFKDT-WTMPDILRYLGYSLPTFLSALLLSTFTPSINTLLDFVTALTTPWVTQIYPAVLYWKVLHRRAA------------------------------------------------DNIECGLDNPVKRSEKITVALVFTVGCVSFCACALKAVGYLAFDELRPSFQIGCNDWLIW 934
BLAST of NO15G02440 vs. NCBI_GenBank
Match: OLQ07379.1 (N amino acid transport system protein [Symbiodinium microadriaticum]) HSP 1 Score: 195.3 bits (495), Expect = 5.200e-46 Identity = 160/525 (30.48%), Postives = 236/525 (44.95%), Query Frame = 0
Query: 75 WAMAGLILFSFTAPGALVSVPFAIGTTGYVLGMLVLCLFTAATCGGCLMLLEIYLAHPHCQNLPELGSVAIGGNGRWGRRMAATAQLCNFVGFLPVSMTINAFALQ--GTLGVNPEDSCLDVYILLISLVCLLTTQARVLTN----TQSLALLSLGAI--LAAGGIQLGIAFSPXXXXXXXXXXXXXXXARFFGHPLLSSTILSTDIIRTFLGLTCMSWSFVPCFLVVELASSMPSPKLFPRSLLLAAXXXXXXXXXXXXXXXXXXXXDIPDPSYSFP------------SWPSSL-----------------PASRVMHALILLANLVSYALDSVPLVRYCQRVWKPRFDPTDWSLRAVGTYFLLSLPSFMFGVLAALVVGNLLALLAFVSALSVPWVTQILPALFYFKWRKRMSSLPPSSFLSGRDHHSPWLLALPSPPPSFPPSSSSFSTSLAFAKPHILLPSEGKGGMHAPLSRKEKLLLVLVGGVGIVNFSICAAAAVGKVSVSELRGHTQIGCGTWTVY 563
W AG+ILF+F AP A+++VPFAI GY GM++ + T A+ G MLLE+ L +PHC+ L +LG I GRW + QL NF F+P +++ A +L GTLG P C+D Y+ ++ +CLL+TQ R N T L S+G + + G Q A++FG+P + +IR G T +W+F+P FL VEL++ MP+P F +SLLLA + FP W ++ + + +A L N V Y LDSVPL R+CQ W P F T W++ + Y +LP+F +L + ++ L+ FV+AL++PWVTQI PA+ Y+K FL GR A +I + G+ P+ + EK+ + LV VG ++F C AVG +++ ELR QIGC W ++
Sbjct: 22 WKSAGIILFTFAAPSAVMAVPFAIANAGYAGGMILCIILTWASVAGANMLLEMKLLYPHCETLGDLGKEVI---GRWTQIWGNVIQLGNFCLFMPCALSFVAQSLYSIGTLG--PLGDCIDYYVWAVAGICLLSTQVRSFDNVNVFTTIAFLCSIGMVVTMVVGAFQ--------------YEHTPRIPAQWFGNPEPDPGL---RLIRLASGFTINAWAFIPAFLTVELSTCMPNPVDFKKSLLLAGGLNVVLFVLPGCIESHVVGEVPHVCNLCFPIILRIVGSIVVVRWGYNVGEVIAITAGVGAFVPGNVINTLFNAFQLGGNFVCYMLDSVPLARFCQETWAPNFKDT-WTMPDILRYLGYTLPTFFVALLLSTFAPSIDTLVDFVTALTIPWVTQIYPAVLYWK------------FLHGR------------------------------AADNI------ECGLEDPIKKSEKITVALVFTVGCISFCACMLKAVGYLALDELRPSFQIGCNNWLIW 475
BLAST of NO15G02440 vs. NCBI_GenBank
Match: OLP89942.1 (cytochrome c oxidase subunit 2 [Symbiodinium microadriaticum]) HSP 1 Score: 163.7 bits (413), Expect = 1.700e-36 Identity = 129/446 (28.92%), Postives = 191/446 (42.83%), Query Frame = 0
Query: 123 MLLEIYLAHPHCQNLPELGSVAIGGNGRWGRRMAATAQLCNFVGFLPVSMTINAFALQGTLGVNPEDSCLDVYILLISLVCLLTTQARVLTNTQSLALLSLGAILAAGGIQLGIAFSPXXXXXXXXXXXXXXXARFFGHPLLSSTILSTDIIRTFLGLTCMSWSFVPCFLVVELASSMPSPKLFPRSLLLAAXXXXXXXXXXXXXXXXXXXXDIPDP---SYSFPSWPSSLPASRVMHALILLANLVSYALDSVPLVRYCQRVWKPRFDPTDWSLRAVGTYFLLSLPSFMFGVLAALVVGNLLALLAFVSALSVPWVTQILPALFYFKWRKRMSSLPPSSFLSGRDHHSPWLLALPSPPPSFPPSSSSFSTSLAFAKPHILLPSEGKGGMHAPLSRK---EKLLLVLVGGVGIVNFSICAAAAVGKVSVSELRGHTQIGCGTWTVY 563
MLL+I + +P C+ +LG V GR G+ QL NF F+P ++ ALQG + P +C D Y+ L++++CLLTTQ R L+N +SL + L F AR FG+P LS ++R G T SW++VP FL VEL++ M +P F +SLL + ++ + + +W + + L N VSY LDSVPL R+CQ+ W P F T WS V Y ++P+F+ ++ A ++ LL FV+AL+ PWVTQI PAL Y+K FL D S G+ G + SR EK +++ +C+ AVG +++ +LR QIGC W ++
Sbjct: 508 MLLQIKMRYPDCETFGDLGFVVF---GRPGKIFGNLIQLGNFCLFMPCALRFCGQALQGMGSIGPLGACTDYYVWLVAILCLLTTQVRSLSNANVFTQISLVCVFGMIVCMLVAVFE--------FDIEDKIPARLFGNP---EPDLSMMVVRVASGCTISSWAYVPAFLTVELSACMETPAEFKKSLLFSGGLNVLVFIIVGSIVVARWGFEVGEVISITAGVGAWVPGTDVNTIFSCFKLGGNFVSYMLDSVPLCRFCQKSWAPSFKDT-WSASDVMRYLGYTMPTFILALILATFTPSIGTLLDFVTALTTPWVTQIYPALLYWK------------FLRDCD-------------------------------------SNGESGKSSQASRSIMLEKAMVLXXXXXXXXXXVMCSVKAVGYLAIEDLRPKFQIGCSGWVLW 889
BLAST of NO15G02440 vs. NCBI_GenBank
Match: XP_005770486.1 (hypothetical protein EMIHUDRAFT_196102 [Emiliania huxleyi CCMP1516] >EOD18057.1 hypothetical protein EMIHUDRAFT_196102 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 113.6 bits (283), Expect = 2.000e-21 Identity = 101/316 (31.96%), Postives = 148/316 (46.84%), Query Frame = 0
Query: 259 FGHPLLSSTILSTDIIRTFLGLTCMSWSFVPCFLVVELASSMPSPKLFPRSLLLAAXXXXXXXXXXXXXXXXXXXXDIPDP-----SYSFPSWPS----SLPASRVMHALILLANLVSYALDSVPLVRYCQRVWKPRFDPTDWSLRAVGTYFLLSLPSFMFGVLAALVVGN---LLALLAFVSALSVPWVTQILPALFYFKWRKRMSSLPPSSFLSGRDHHSPWLLALPSPPPSFPPSSSSFSTSLAFAKPHILLPSEGKGGMHAPLSRKEKLLLVLVGGVGIVNFSICAAAAVGKVSVSELRGHTQIGCGTWTVY 563
FG P SS ST + L LT W++VP L+ ELA M SP+ RS+ L+A + DP + S PS S A R++ +L+ L+N V Y LDSVPL R+CQR + P F W +R+VG Y L+S P+++FGV AA+ VG+ L +L++V+AL+VP I P++F L AL PPP+ ++ + SL + P+ G+ + ++R E ++ V G+ IC AA+GK +RG IGC W +Y
Sbjct: 107 FGPPDPSS---STASVEMALSLTTAIWAYVPSLLIAELAFEMESPEHLSRSIALSAGLNVATFLAVGLSVWFLWEGGVDDPITLSEAASSPSGACGSGLSSFAGRMLSSLLCLSNFVGYCLDSVPLARWCQRRFVPHFS-GQWDMRSVGRYALISAPAWVFGVFAAVFVGSPSGLFVMLSWVTALTVPACNLIFPSIF-------------------------TLCALGPPPPA--ARQAALTRSL---MSDVEAPTPGR-CIRQSITRTEGVIAACVLLWGLFALVICTYAAIGKTFDPIVRGPQVIGCKGWGIY 387 The following BLAST results are available for this feature:
BLAST of NO15G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02440 ID=NO15G02440|Name=NO15G02440|organism=Nannochloropsis oceanica|type=gene|length=1695bpback to top protein sequence of NO15G02440.1 >NO15G02440.1-protein ID=NO15G02440.1-protein|Name=NO15G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=565bpback to top Synonyms
Publications
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