NO15G01300, NO15G01300 (gene) Nannochloropsis oceanica

Overview
NameNO15G01300
Unique NameNO15G01300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3067
Alignment locationchr15:365286..368352 +

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger, RING-type
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:365286..368352 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO15G01300 vs. NCBI_GenBank
Match: EWM22486.1 (Zinc finger, RING-type [Nannochloropsis gaditana])

HSP 1 Score: 632.5 bits (1630), Expect = 1.800e-177
Identity = 401/772 (51.94%), Postives = 436/772 (56.48%), Query Frame = 0
Query:    1 MPGLTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVPRWTHIRLLTLMYTLLLWDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPPAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLMRGAVGTGFAPPLNFPHPPTTVNXXXXXXXXXXXXXXXXXAFAGIGGNGGMHSHFLPSPYAGFPPMLPPGALDAGTVAGGGGSSVFQTTAYQPVPMLFGGGMGPAGVFGPGLLWGGGE--MGGSDFAERPFVLYRVVSRAGAVVRASRNPASQTLRLHRQHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAMPSPPPMPLGMAGFLP----PFFSPPNXXXXXXXXXXXXXXXXXXXXXXXXXXSRSLVSLRLDLNEAKAGVDSMVEGWAVLLAKQQVEMQRFQRVMARLEQAHEDIATQ 767
            M G+TF +Y ALS SLTA  VSYAFQSR QFYPAVIYLVTSK SVLVLGNMGLMLTLL GR +K++F G+LR VEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNV RWTH RL+ LMYTLL+ DVAFVAGCVYFWKGPSVLILFGFEYTILAVSV+STLLRYCLHL+DMRIEGNWPQKGSY+FFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDAT EEL  CEHTCIICRDLMEAGPGAK+LPC+HIFHLDCLRLWLQQQQSCPTCRADIPT A  P  +                                                                                                        ++  G   P NFPHPP +            XXXX     AG                A +PP                    F      P   LF  GM P        L G     MG  D+   PF LYRV S  G  VRAS    S  LR HRQ+E                                                     LE + SP P   G++   P    PF SP +                          SRSL+SLRL+LNEA+AG+D++VEG AVLLA+QQ E  R Q V+A LE AHE++A +
Sbjct:    1 MAGMTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVSRWTHFRLMALMYTLLVVDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTPVRSGPPAAAVVADAGAAVGEERERLAEAGDDMAAPSDQAPAGPQETPNASLRGPSHPSSSQWGATNTRGYAGVPTRATRWP-------------------------ASLPDGAPLPSNFPHPPASNRGSITNPPASSXXXXVTSNIAG--------------QTAQYPPYXXXXXXXXXXXXXXXXXXXF-----IPPSALF--GMFPTDA---SALSGDASLLMGNMDYPAPPFALYRVSSPNGVQVRASPESTSAILRTHRQNE---------------TILILERKAAQAGSEVVYRVLGGGFIHDRLESENSRAALEKILSPFPFSSGLSPSTPSSLLPFPSPAS-------------VTSSTGIGGAGGLSRSLISLRLELNEARAGMDTVVEGLAVLLARQQAEALRLQNVLAGLEHAHEELAAR 695          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: ETK97367.1 (hypothetical protein L915_00071 [Phytophthora parasitica] >ETL50723.1 hypothetical protein L916_00068 [Phytophthora parasitica] >ETM03756.1 hypothetical protein L917_00059 [Phytophthora parasitica] >ETP27452.1 hypothetical protein F441_00069 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 369.8 bits (948), Expect = 2.200e-98
Identity = 188/341 (55.13%), Postives = 251/341 (73.61%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT+L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTMLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: ETI57651.1 (hypothetical protein F443_00071 [Phytophthora parasitica P1569])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: ETM57051.1 (hypothetical protein L914_00061 [Phytophthora parasitica])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: XP_008889672.1 (hypothetical protein PPTG_00056 [Phytophthora parasitica INRA-310] >ETN23460.1 hypothetical protein PPTG_00056 [Phytophthora parasitica INRA-310])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: ETO86380.1 (hypothetical protein F444_00066 [Phytophthora parasitica P1976])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGCV--YFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLNVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: ETP55378.1 (hypothetical protein F442_00060 [Phytophthora parasitica P10297])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: KUF78804.1 (E3 ubiquitin-protein ligase HRD1 [Phytophthora nicotianae])

HSP 1 Score: 368.6 bits (945), Expect = 4.900e-98
Identity = 188/341 (55.13%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPP 342
            + F  Y + S +     + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: XP_009532996.1 (hypothetical protein PHYSODRAFT_454953, partial [Phytophthora sojae] >EGZ12663.1 hypothetical protein PHYSODRAFT_454953, partial [Phytophthora sojae])

HSP 1 Score: 368.2 bits (944), Expect = 6.400e-98
Identity = 186/334 (55.69%), Postives = 248/334 (74.25%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFVAGCV--YFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADI 335
            + F  Y + S +  A  + Y + +R QFYP+VIYLVTSK+SVLVLGN GL+LT L GR++KS FLG LR  EVELL++N RYAVTETCLALTIFREE++  V+ LFTAL+F K FHWL Q+R+E++E +D + R TH+RL+ LM  L   D  FV  C       GPSV ILFGFE+ IL V++ +T LRY L+++D R++G W  K +Y+F+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      K+LPC+HIFH+DCL++W+Q+QQ+CPTCR+ I
Sbjct:    1 MKFWLYSSASLAACAGLIWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFREEISFHVMVLFTALVFLKIFHWLSQARIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCTLKVVENGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEM-TPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTI 333          
BLAST of NO15G01300 vs. NCBI_GenBank
Match: XP_012201018.1 (hypothetical protein SPRG_06240 [Saprolegnia parasitica CBS 223.65] >KDO28192.1 hypothetical protein SPRG_06240 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 363.2 bits (931), Expect = 2.000e-96
Identity = 186/356 (52.25%), Postives = 251/356 (70.51%), Query Frame = 0
Query:    4 LTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGNMGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVPRWTHIRLLTLMYTLLLWDVAFV--AGCVYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGNWPQKGSYIFFLEFATEVVRFLSYVV----------------FFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATP 341
            + F  Y + S    A  V+Y + +R QFYP VIYLVTSK+SV+VL N+  +LT+L GR+ K +FLG LR  E+E+LYD+AR+A+ ETC  L++FREE+T++VL LFT LLF K+FHWLCQ R E++E S+ V R TH+RL+ LM  L   D++FV  +      +GPSVL+LFGFE+ +L VS+ +  +RY LHLID R++G W  K +Y+F+LE  TE+V+ + Y+V                FF IIFTYYGMPLH++RDLWMS  NL+RR++ + +YR +TANMNERFP  T +EL   +  CIICR+ M      K+LPC+HIFHL+CLR+WLQ+QQ+CPTCRA+IPT   P
Sbjct:    1 MRFGLYASTSLIAGAGLVAYTYHTRQQFYPTVIYLVTSKVSVMVLCNVAFVLTILCGRVFKRIFLGTLRDAELEMLYDHARFAIAETCFTLSVFREEMTLKVLALFTLLLFIKTFHWLCQWRGEHIEQSEVVSRSTHVRLVMLMSLLAAVDMSFVVLSAVKVLERGPSVLVLFGFEFLVLFVSLVAVFMRYVLHLIDARVDGTWANKFTYVFYLELITEIVKLIVYLVHAVRLGNAFVNRAIVDFFMIIFTYYGMPLHLLRDLWMSIRNLQRRIITYFRYRRITANMNERFPSPTEDELNDTDRICIICREEM-TPETCKKLPCSHIFHLNCLRMWLQRQQTCPTCRANIPTDRQP 355          
The following BLAST results are available for this feature:
BLAST of NO15G01300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22486.11.800e-17751.94Zinc finger, RING-type [Nannochloropsis gaditana][more]
ETK97367.12.200e-9855.13hypothetical protein L915_00071 [Phytophthora para... [more]
ETI57651.14.900e-9855.13hypothetical protein F443_00071 [Phytophthora para... [more]
ETM57051.14.900e-9855.13hypothetical protein L914_00061 [Phytophthora para... [more]
XP_008889672.14.900e-9855.13hypothetical protein PPTG_00056 [Phytophthora para... [more]
ETO86380.14.900e-9855.13hypothetical protein F444_00066 [Phytophthora para... [more]
ETP55378.14.900e-9855.13hypothetical protein F442_00060 [Phytophthora para... [more]
KUF78804.14.900e-9855.13E3 ubiquitin-protein ligase HRD1 [Phytophthora nic... [more]
XP_009532996.16.400e-9855.69hypothetical protein PHYSODRAFT_454953, partial [P... [more]
XP_012201018.12.000e-9652.25hypothetical protein SPRG_06240 [Saprolegnia paras... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001476NSK001476Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01300.1NO15G01300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G01300.2NO15G01300.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587459gene_4674Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g51gene7981Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01300.1NO15G01300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G01300.2NO15G01300.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01300 ID=NO15G01300|Name=NO15G01300|organism=Nannochloropsis oceanica|type=gene|length=3067bp
CATACAGGTTGTGCATTGCGCTACCGTGGGCCGGTCCTTGCCCCGTGCGT
CGCCTCATATCACCATCACCGCAGCTTGGCCCACAGCAAGGTCTCTCTTC
CCGTCCCCTACGATACTCCAATGCCCGGTCTGACCTTTCCCGCATACTTT
GCCCTGTCCTCATCCTTGACGGCGTTGGCGGTGAGCTATGCCTTCCAGTC
CCGCTCCCAGTTCTACCCGGCCGTTATTTACCTCGTTACTTCCAAACTTT
CCGTCCTCGTACTTGGCAACATGGgtgagtccgtaggaggggaaaaggat
gtgaggatgcgagaaggtgtgggcagtgtgtttgaatggaggaatgaacg
tgtccacgtcgttttcttcattctctccatctcatgccgtgagaaagggt
gatattcctttcagttgcatgtcttgcctttctcactttcatccctccct
cccacctattcactactccagGCCTGATGCTAACGCTTCTGGCCGGGCGC
ATTATGAAGAGTGTATTTTTGGGGCAGCTTCGGGGCGTGGAAGTGGAACT
TCTGTACGACAATGCCCGATACGCTGTGACTGAGACCTGTCTGGCCCTCA
CAATCTTCCGGGAGGAGCTGACGGTGCGCGTGCTGACGCTTTTTACAGCC
TTATTGTTTTCGAAGAGCTTTCATTGGCTATGCCAGAGTCGGGTGGAATA
TGTGGAGTCAGACAATGTCCCGCGGTGGACGCACATTCGGCTGCTAACTC
TCATGTACACATTGCTACTCTGGGACGTGGCGTTCGTGGCCGGCTGCGTC
TACTTCTGGAAGGGGCCGTCGGTGCTAATCCTTTTCGGGTTTGAGTATAC
TATCTTGGCTGTTTCGGTGACCAGTACCTTGTTACGGTATTGTTTGCATT
TGATTGACATGCGGATTGAGGGGAACTGGCCCCAAAAGGGCTCTTATATC
TTCTTCTTGGAATTTGCCACGGAAGTCGTTCGGTTTTTGTCGTACGTGGT
ATTTTTTAGTATCATTTTCACATATTACGGTATGCCTTTGCACATTGTAA
GAGATTTGTGGATGTCGTATGTTAATCTCAAGCGTCGCCTTGTCATTTTC
AACAAGTACCGACACTTGACCGCAAATATGAATGAACGCTTCCCCGACGC
CACCCCCGAAGAGCTCGTCGCCTGCGAGCACACCTGTATCATCTGCCGCG
ACCTTATGGAAGCTGGACCTGGAGCAAAAAGACTACCTTGTGCTCATATT
TTCCATCTTGACTGCCTCCGTCTATGGCTCCAGCAACAACAAAGCTGCCC
GACCTGCCGCGCTGACATTCCCACCACGGCTACCCCACCCGCTGGTACGC
CTGCCGCACAAGCCCCTGTCGAAGATGGAGGCGTCGCTGCTGCTGCTGCT
GCTGCTGCAGGACAAGGAGGAGCTGAAGCGGGTGATGAGGTGCAGCAAGG
GGTGCTGGGAGGAGTGCATGCCGCCGCGCCGCCTAACGCAGGACAGCCGG
CAGCGCCCCGGCAGCAACAACAACGACTTCAGCAGCAAGAGCGGCAACTT
CCCCGACTCGTTGACTGGCATCGAGCTGGGGGAGCAATGCCACACCATGC
GGAGCCTGCCGGAGCAGCAGCAGCAGGAGGAGCAGGAGGGGGGCCTGGTT
TGATGAGAGGTGCTGTGGGTACCGGCTTCGCCCCGCCTCTCAACTTCCCG
CACCCGCCCACCACAGTCAACGGCTCGGCCTTTCCTCCCCATCCTTCTTT
TCCCCACCCTCCCACAACTCCCGCATTTGCCGGTATTGGTGGTAATGGTG
GCATGCATTCTCATTTCCTTCCCTCCCCTTACGCTGGCTTTCCTCCCATG
TTGCCCCCGGGAGCGCTAGATGCAGGAACAGTTGCAGGCGGAGGTGGTTC
CTCCGTTTTCCAGACTACTGCCTATCAGCCGGTGCCGATGCTATTTGGTG
GTGGGATGGGACCGGCGGGAGTGTTTGGTCCTGGCCTGCTCTGGGGAGGA
GGAGAAATGGGAGGGTCGGATTTCGCGGAGAGGCCGTTTGTGTTGTATCG
TGTTGTGAGCCGGGCGGGAGCGGTTGTGCGGGCTTCAAGGAACCCTGCTT
CTCAAACCTTGCGCCTACATCGGCAGgtgagctttaaaagagggatagat
gtttttcgggaagaggaggaaagtcgctcttttccccatggttttggtgt
ttttcactcctagaattctctaccacacttcctcctaactcacctatgtt
tctcttctccactcaacatagCACGAAATGATTATCATCCTCGAGCGGGC
AGCAGCCTCCGAGCAGTCGGGCGGTATGGTGGTTTATCGTGTGCTGGGTG
GTGGCTTCATTCACGAGCAGGAGCAACAGCAGCAGCAGAACACGGGGGCA
CGCAGCAGCAGTTGCAGCAACAACAGCGGAACCATCTTGGAAGCCATGCC
CTCCCCACCTCCCATGCCCCTTGGAATGGCTGGCTTCTTGCCGCCCTTTT
TCTCACCCCCTAACCCATCCTTCAGCAGCTGCAGCAACAGCAACAGCAAC
AGTAGTGCAACCGGCGCGGGCATTGGTGGGGCGGGAGGGCTGTCGCGGTC
CCTTGTCTCCTTGCGGCTAGATTTGAACGAAGCGAAGGCTGGTGTTGATT
CAATGGTGGAGGGATGGGCGGTGCTCTTGGCCAAACAGCAAGTGGAGATG
CAACGTTTTCAGAGAGTCATGGCCCGCTTGGAGCAGGCACATGAGGACAT
AGCGACACAGGCAACAGCAGCAGCAGCTGCAGCAGCGGCCGTTGCGGGTT
GTGGGCCTGGGTCTGCGCAAGAGAGTGGGACTGGAGGAGAGGAAGGAGGA
CTGGGGGGGGGGGGAAGTAGCAGAAGGTAAGGGAGCAGGCGCCAAGAGAG
AGGTGGCGCAGGCTCAGGCACCAGCAGTGGTGGAGAGAGGGTGACGGGTA
GGGAGGATGGAAAGGAAATGAATCGGATCAAAAGGCATCTGTGGGTACCA
ACATATGGCTATAAACACAATCAATAGAATTCGAAGGAAACAGAAAATAA
AATAACGATTGACCTGA
back to top

protein sequence of NO15G01300.1

>NO15G01300.1-protein ID=NO15G01300.1-protein|Name=NO15G01300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=806bp
MPGLTFPAYFALSSSLTALAVSYAFQSRSQFYPAVIYLVTSKLSVLVLGN
MGLMLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREE
LTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVPRWTHIRLLTLMYTLL
LWDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRI
EGNWPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMS
YVNLKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAG
PGAKRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPPAGTPAAQAP
VEDGGVAAAAAAAAGQGGAEAGDEVQQGVLGGVHAAAPPNAGQPAAPRQQ
QQRLQQQERQLPRLVDWHRAGGAMPHHAEPAGAAAAGGAGGGPGLMRGAV
GTGFAPPLNFPHPPTTVNGSAFPPHPSFPHPPTTPAFAGIGGNGGMHSHF
LPSPYAGFPPMLPPGALDAGTVAGGGGSSVFQTTAYQPVPMLFGGGMGPA
GVFGPGLLWGGGEMGGSDFAERPFVLYRVVSRAGAVVRASRNPASQTLRL
HRQHEMIIILERAAASEQSGGMVVYRVLGGGFIHEQEQQQQQNTGARSSS
CSNNSGTILEAMPSPPPMPLGMAGFLPPFFSPPNPSFSSCSNSNSNSSAT
GAGIGGAGGLSRSLVSLRLDLNEAKAGVDSMVEGWAVLLAKQQVEMQRFQ
RVMARLEQAHEDIATQATAAAAAAAAVAGCGPGSAQESGTGGEEGGLGGG
GSSRR*
back to top

protein sequence of NO15G01300.2

>NO15G01300.2-protein ID=NO15G01300.2-protein|Name=NO15G01300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=753bp
MLTLLAGRIMKSVFLGQLRGVEVELLYDNARYAVTETCLALTIFREELTV
RVLTLFTALLFSKSFHWLCQSRVEYVESDNVPRWTHIRLLTLMYTLLLWD
VAFVAGCVYFWKGPSVLILFGFEYTILAVSVTSTLLRYCLHLIDMRIEGN
WPQKGSYIFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVN
LKRRLVIFNKYRHLTANMNERFPDATPEELVACEHTCIICRDLMEAGPGA
KRLPCAHIFHLDCLRLWLQQQQSCPTCRADIPTTATPPAGTPAAQAPVED
GGVAAAAAAAAGQGGAEAGDEVQQGVLGGVHAAAPPNAGQPAAPRQQQQR
LQQQERQLPRLVDWHRAGGAMPHHAEPAGAAAAGGAGGGPGLMRGAVGTG
FAPPLNFPHPPTTVNGSAFPPHPSFPHPPTTPAFAGIGGNGGMHSHFLPS
PYAGFPPMLPPGALDAGTVAGGGGSSVFQTTAYQPVPMLFGGGMGPAGVF
GPGLLWGGGEMGGSDFAERPFVLYRVVSRAGAVVRASRNPASQTLRLHRQ
HEMIIILERAAASEQSGGMVVYRVLGGGFIHEQEQQQQQNTGARSSSCSN
NSGTILEAMPSPPPMPLGMAGFLPPFFSPPNPSFSSCSNSNSNSSATGAG
IGGAGGLSRSLVSLRLDLNEAKAGVDSMVEGWAVLLAKQQVEMQRFQRVM
ARLEQAHEDIATQATAAAAAAAAVAGCGPGSAQESGTGGEEGGLGGGGSS
RR*
back to top
Synonyms
Publications