NO15G00740, NO15G00740 (gene) Nannochloropsis oceanica

Overview
NameNO15G00740
Unique NameNO15G00740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4472
Alignment locationchr15:235640..240111 -

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Properties
Property NameValue
DescriptionCOP9 signalosome complex subunit 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:235640..240111 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0008180COP9 signalosome
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR037754CSN4
IPR000717PCI_dom
Homology
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_009826599.1 (hypothetical protein H257_03969 [Aphanomyces astaci] >ETV83169.1 hypothetical protein H257_03969 [Aphanomyces astaci])

HSP 1 Score: 339.0 bits (868), Expect = 2.200e-89
Identity = 198/424 (46.70%), Postives = 271/424 (63.92%), Query Frame = 0
Query:    2 VDIQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEA-LRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAV--TDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELLA 423
            + I A +++I  +  Q ++ T     YKEL+ +      F   TSLKA  DH L   V   VSRG+L+  A+  +  +     + D  A  +D+  Y L K       FE+AD+  RE L D L  E  Y EAA  LA +NLES +R ++D +KAE YVKIAE YL EDE VDAE F+NRAS ++ AV  +++ ++LRY+V+YA++LDA RKFL+AALRY+E SQ+   E+ P++LL LL K+VTCAIL  AGPQRSR+L TL+KDER    E       HA +LEKMYMEQ+L R +++ F +SL  HQ  +LA+GFT+LE+A +EHN +A SK+Y ++RF ELG LL V  ++AEK+AA MIGE R+ G IDQ+ G+L F+   +      L GWD +I   C  VNA  E +  ++P+LLA
Sbjct:    1 MSITAELSKIAKIQDQKEKLT----AYKELVDA-----TFQDFTSLKATFDHSLDESVQLAVSRGLLTHFASSVLVRI-----DPDVHAWKKDLLAYCLNKIKPRILSFEEADIVLREVLCDLLMDEEDYIEAAKTLAAINLESSARQYTDEEKAEKYVKIAELYLQEDETVDAENFINRASRVIHAVGQSNWPLKLRYQVSYARILDAKRKFLDAALRYYEFSQSKPDEVDPDDLLQLLSKAVTCAILAAAGPQRSRLLATLYKDERVKASE-------HAAILEKMYMEQLLRRGDIAAFDQSLLPHQKAQLANGFTVLEQAFLEHNMLAVSKIYTSMRFQELGTLLGVDATRAEKVAALMIGEERMNGSIDQLHGILEFQSNVD-----ALHGWDDRIQTICLNVNACAENIQATYPQLLA 398          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_008869268.1 (hypothetical protein H310_06122 [Aphanomyces invadans] >ETW02663.1 hypothetical protein H310_06122 [Aphanomyces invadans])

HSP 1 Score: 332.4 bits (851), Expect = 2.000e-87
Identity = 198/416 (47.60%), Postives = 262/416 (62.98%), Query Frame = 0
Query:    9 AEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAV-TDYW-VQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELLA 423
            AE+  +A   D+  +  S YK L+        F    SLKA+ DH L   V   +SRG+L+ LA+  +  +      E     +D   Y L K       FE+ADV  RE L D L  E  Y EAA  LA +NLES SR ++D +KAE YVKIAE YL EDE VDAE ++NRAS ++ AV ++ W ++LRY+V+YA++LDA RKFL+AALRY+E SQ+   E+ P++L+ LLGK+VTCAIL  AGPQRSR+L TL+KDER    E       HA +LEKM+MEQ+L R+++  F  SL  HQ  +LA+GFT+LE+A +EHN +A SK+Y ++RF ELG LL V   +AEK+AA MIGE R+KG IDQ+ G+L F+       A  L GWD +I A C  VNA  E +   +P L A
Sbjct:    5 AELSKIAKIQDQKEKLNS-YKALVDG-----TFLDFASLKAIFDHALDESVQLAISRGLLTHLASSVLVRIDP----EAHAWKKDFLVYCLAKIKSRILSFEEADVALREILCDLLMDEEEYIEAAKTLAAINLESSSRQYTDDEKAEKYVKIAELYLQEDETVDAENYINRASRVIHAVGSNNWPLKLRYQVSYARILDAKRKFLDAALRYYEFSQSKPDEVDPDDLMQLLGKAVTCAILAAAGPQRSRLLATLYKDERVKASE-------HAAILEKMHMEQLLRRSDIVSFELSLLPHQKAQLANGFTVLEQAFLEHNMLAVSKIYKSMRFQELGTLLGVDALRAEKVAAIMIGEERMKGSIDQLHGMLEFQTN-----ADALHGWDDRIQAICLNVNAAAENIQSKYPHLCA 398          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: OQR96149.1 (COP9 signalosome complex subunit [Achlya hypogyna])

HSP 1 Score: 323.6 bits (828), Expect = 9.500e-85
Identity = 199/426 (46.71%), Postives = 274/426 (64.32%), Query Frame = 0
Query:    6 AAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLS--FLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAV--TDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHK-----DERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELLA 423
            ++IA++  +A  AD+  +  S YKE I + V          LKAL+DH+L+ DV  +V+R VL     A E + +   G K       +DV  YAL++       FE+ DV  RE L D    E  Y EAA  LA +NLES +R +SD QKAE YVKIAE YL EDE VDAE F+NRAS ++ AV  +++ ++LRY+V+YA++LD+ RKFL+AALRY+E SQ+   E+ P++LL LLGK++TCAIL  AGPQRSR+L TL+K     DER  ++E       HA +LEK+Y+EQ L R++++ F + L  HQ   LA+GFT++E+A +EHN +A S++Y ++ F ELG LL V   +AEK+AA MIGE R+KG IDQV  +L FE  +EG+   VLQGWD +I   C  VNA  E +   +P+L A
Sbjct:    2 SSIAQLTKIAKIADQKEKLAS-YKEYIDASV-----FDQAGLKALVDHVLNEDVQLVVARTVLGQFVQALERIDSEVHGWK-------KDVVIYALQQIKPRILSFEETDVVLRERLCDLYMEEEEYIEAAKALAAINLESSARQYSDDQKAEKYVKIAELYLQEDETVDAENFINRASRVIHAVDASNWALKLRYQVSYARILDSKRKFLDAALRYYEFSQSKPDEVDPDDLLQLLGKAMTCAILAAAGPQRSRLLATLYKARCSCDERIKSME-------HAGILEKLYLEQRLRRSDIAAFEEGLLPHQKAVLANGFTVVEQAFLEHNMLAVSRIYTSMYFDELGTLLGVDAKKAEKVAAIMIGEERMKGSIDQVHSLLEFE--QEGD---VLQGWDDRIGTVCLNVNACAENIQTKYPQLFA 402          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_024572366.1 (cop8 (constitutive photomorphogenic) homolog [Plasmopara halstedii] >CEG35997.1 cop8 (constitutive photomorphogenic) homolog [Plasmopara halstedii])

HSP 1 Score: 322.8 bits (826), Expect = 1.600e-84
Identity = 189/421 (44.89%), Postives = 264/421 (62.71%), Query Frame = 0
Query:    1 MVDIQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELL 422
            M  ++A    I  ++ Q ++    T+ YK L+   +  P      SLKAL+ H+L  DV  ++SR V++ LA+  VA +   +     E +     + L K       FE+ DV FRE L      E  Y EAA  LA +NLES +R ++D +K E YVKIAE YL +DE VDAE F+NRAS  +  + D+ ++LRY+V+YA++LDA RKFL+AALRY+E SQ+   E+ P++LL LLGK+VTCAIL  AGPQRSR+LGTL+KDER  T E       H  +LEKMYMEQ++ R E+ +F KSL  HQ   L++GFT+LE A +EHN +AAS++Y NI   ELG+LLE+  + AE++AA MIGE R+KG IDQ  G L FE   +     VL  +D +I++ C  VN   E++   +P+++
Sbjct:    1 MTTMKAEFQRISRISDQKEK----TAAYKTLLEEHLHDP-----VSLKALVTHILGEDVLLVISRAVITHLAS-VVAGIDVDAHPWKLEFIC----FCLAKIKPRILSFEEPDVMFRESLAAMYMDEEEYIEAAKALAAINLESSTRQYTDVEKTEKYVKIAELYLQDDETVDAENFINRASRFIHNIEDWALKLRYQVSYARILDAKRKFLDAALRYYEFSQSKPDEVDPDDLLELLGKAVTCAILASAGPQRSRLLGTLYKDERVKTSE-------HVAILEKMYMEQLIRRPELVQFEKSLLPHQKAVLSNGFTVLENAFLEHNLLAASRIYSNISLEELGKLLEIEPANAERVAATMIGEDRMKGSIDQHMGFLEFENTED----EVLTAFDTRISSICFNVNQCAEQIEHQYPDIV 396          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_008613584.1 (hypothetical protein SDRG_09429 [Saprolegnia diclina VS20] >EQC32898.1 hypothetical protein SDRG_09429 [Saprolegnia diclina VS20])

HSP 1 Score: 320.1 bits (819), Expect = 1.000e-83
Identity = 189/419 (45.11%), Postives = 275/419 (65.63%), Query Frame = 0
Query:    6 AAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAV--TDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELLA 423
            ++IA++  +A   D+   + + YK+ I +           +LK+L++H+L+ DV  +V+R VLS  A +AV  +      E     +D+  +AL++       FE+ DV  RE L D    E  Y EAA  LA +NLES +R +SD +KAE YVKIAE YL EDE VDAE F+NRAS ++ AV  +++ +++RY+V+YA++LD+ RKFL+AALRY+E SQ+   E+ P++LL LLGK+ TCAIL  AGPQRSR+L TL+KDER  ++E       HA +LEK+Y+EQ L R++++ F + L  HQ  KLA+GFT++E+A +EHN +A S++Y ++ F ELG LL V   +AEK+AA MI E R+KG IDQV+G+L FE  ++GE   VLQ WD +I + C  VNA  E +   +P +L+
Sbjct:    2 SSIAKLTQIAKIVDQ-KEKLAAYKDYIDASALNE-----AALKSLLEHVLTDDVQLVVARTVLSQFA-QAVGRID----TEVHAWKKDLLVFALQQIKPRILSFEETDVVLREQLCDLFMEEEEYIEAAKTLAAINLESSARQYSDDEKAEKYVKIAELYLQEDETVDAENFINRASRVIHAVDASNWALKIRYQVSYARILDSKRKFLDAALRYYEFSQSKPDEVDPDDLLQLLGKATTCAILAAAGPQRSRLLATLYKDERIKSME-------HAGILEKLYLEQRLRRSDIAAFEEGLLPHQKAKLANGFTVVEQAFLEHNMLAVSRIYTSMYFDELGTLLGVDAKKAEKVAAIMISEDRMKGSIDQVNGLLEFE--QDGE---VLQAWDDRINSICLNVNACAENIQSKYPHVLS 397          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_012202738.1 (hypothetical protein SPRG_08000 [Saprolegnia parasitica CBS 223.65] >KDO26596.1 hypothetical protein SPRG_08000 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 319.7 bits (818), Expect = 1.400e-83
Identity = 190/417 (45.56%), Postives = 274/417 (65.71%), Query Frame = 0
Query:    6 AAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAV--TDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPEL 421
            ++IA++  +A  AD+   +   YK+ I +           +LK+L++H+L+ DV  +V+R VLS  A +AV  ++     E     +D+  +AL+        FE+ DV  RE L D    E  Y EAA  LA +NLES +R +SD +KAE YVKIAE YL EDE VDAE F+NRAS ++ AV  +++ +++RY+V+YA++LD+ RKFL+AALRY+E SQ+   E+ P++LL LLGK+ TCAIL  AGPQRSR+L TL+KDER  ++E       HA +LEK+Y+EQ L R++++ F + L  HQ  KLA+GFT++E+A +EHN +A S++Y ++ F ELG LL V   +AEK+AA MI E R+KG IDQV+G+L FE  ++G+   VLQGWD +I A C  VNA  E +   +P +
Sbjct:    2 SSIAQLTQIAKIADQ-KEKLGAYKDYIDASALNE-----AALKSLLEHVLTDDVQLVVARTVLSQFA-QAVGRIN----IEIHAWKKDLLIFALQHIKPRILSFEETDVVLREQLCDLFMEEEEYIEAAKTLAAINLESSARQYSDDEKAEKYVKIAELYLQEDETVDAENFINRASRVIHAVDPSNWALKIRYQVSYARILDSKRKFLDAALRYYEFSQSKPDEVDPDDLLQLLGKATTCAILAAAGPQRSRLLATLYKDERIKSME-------HAGILEKLYLEQRLRRSDIAAFEEGLLPHQKAKLANGFTVVEQAFLEHNMLAVSRIYTSMYFDELGTLLGVDAKKAEKVAAIMISEDRMKGSIDQVNGLLEFE--QDGD---VLQGWDDRINAICLNVNACAENIQSKYPHV 395          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: GAY02998.1 (COP9 signalosome complex subunit, putative [Pythium insidiosum])

HSP 1 Score: 316.6 bits (810), Expect = 1.200e-82
Identity = 189/412 (45.87%), Postives = 259/412 (62.86%), Query Frame = 0
Query:    4 IQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSK 416
            +   +  I A+A Q D+    T+ YKELI +       +S  SL+A++ HLL  DV  ++SR  +  LA+      ++ S  +      D   + L K       FE+ADVT RE L D    +  Y EAA  LA +NLES SR +SD QKAE YVKIAE YL EDE VDAE F+NRAS  + +V D+ ++LRY+V+YA++LDA RKFL+AALRY+E SQ+   E+ P++LL LL K+VTCAIL  AGPQRSR+LGTL+KDER        ++  HA +LEKMY EQ++ R E+ +F +SL  HQ  +LA GFT+LE A +EHN +AAS+VY +I   ELG+LLE+  + AE++AA MI E R+ G IDQ  G L F+G  E      L  +D +I++ C  VN  ++ + +
Sbjct: 1113 VHTELRRIAAIADQKDK----TNAYKELIDA-----SMTSVESLEAIVSHLLDEDVLLVISRAAIMHLASALEHVDAERSPWK-----LDFLTFCLLKIKPRLLSFEEADVTLREALADLYMEDEEYIEAAKALAAINLESSSRQYSDTQKAEKYVKIAELYLQEDETVDAENFINRASRCIHSVEDWALKLRYQVSYARILDAKRKFLDAALRYYEFSQSKPDEVDPDDLLALLQKAVTCAILASAGPQRSRLLGTLYKDERV-------KNSEHAAILEKMYTEQLIRRPELVQFEQSLLPHQKAQLASGFTVLEHAFLEHNLLAASRVYSSISLEELGKLLEIDAASAERVAATMICEERMAGRIDQFTGFLEFDGTDED----ALGAFDAQISSICFHVNQCVDRIEQ 1499          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: XP_009035151.1 (hypothetical protein AURANDRAFT_11912, partial [Aureococcus anophagefferens] >EGB10346.1 hypothetical protein AURANDRAFT_11912, partial [Aureococcus anophagefferens])

HSP 1 Score: 311.6 bits (797), Expect = 3.700e-81
Identity = 184/392 (46.94%), Postives = 252/392 (64.29%), Query Frame = 0
Query:   27 KYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTD--YW-VQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDER-TGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVS 415
            KYK ++ +L  +   S    L+A + HLLS  VP +VSR V++  A  AVA ++        E L  +  +A+       Q FEDAD   R  L+D   AEGSYKEAA  L G+++E+ S+ ++D  KA +YVKIAET+L +DE+VDAE +VNRASGLM AV    +W +QLRYRVT A+ LDA RKFL+A++RY+ELSQA   E+  ++LL LL K+VTCA+LG AGPQRSRILG L+KDER T  +E  +   AHA+VL++M+  Q++   E++ F  +L  HQ   L DG TI EKA+++HN  A S VY N    E+G LL++   +AE++A+RMI +GRL   +DQVDGVL F      + A  L  +D  IA  C  VNA  +++S
Sbjct:    1 KYKAVVDALAAS---SDVGGLQATLTHLLSDAVPQVVSRNVVAHFA-RAVAAVA------PPERLESICSWAVAAIQPQKQSFEDADHALRHALYDCYLAEGSYKEAACTLGGIDVETCSKPYADLDKAALYVKIAETFLEDDESVDAETYVNRASGLMHAVDGKVHWALQLRYRVTLARTLDARRKFLDASMRYYELSQARHEEVNQDDLLALLSKAVTCALLGNAGPQRSRILGLLYKDERVTSQMEQSDAFAAHARVLKRMFTGQVVRTPEIAAFTATLLPHQKALLGDGLTIPEKAMIQHNLAAVSLVYVNASLREVGALLDIDPRRAEQVASRMIADGRLAAKLDQVDGVLHF-----ADDAPPLARFDDSIAKICLAVNACYDKIS 377          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: CBJ26901.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 311.2 bits (796), Expect = 4.900e-81
Identity = 179/427 (41.92%), Postives = 262/427 (61.36%), Query Frame = 0
Query:    1 MVDIQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESV--SRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRR--EIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELLAP 424
            M  ++A +A I  +  Q +RT R    YK L   L    R      ++A+  HLL   VP +VSR   + LA EA +       + + E    +  + LEK      V + ++   R  LF+ L  +  + EAA  L  LNL++    + ++DAQKAE++VK+AE YL  DE   A+ F ++AS  M+ VTD+ +Q+RYR T A++LDA+RKFL+A++R++ELS A  +  E+ P++LL LLGK++TCA+LGKAGPQRSR +G L +DER G+L  +     H++VL KMY EQIL + +M  F +SL  HQ    A+G  I E+A++EHN VA++++Y+N+ F ELG LL++   QAE++AARMI EGRL+G IDQV+G+L FEG  +      LQ WD+++   CQ VN   E +    P +L P
Sbjct:    1 MAAVEAKLASISGIGDQRERTAR----YKALGEELAAGGRID---DVQAMFRHLLGSGVPPVVSRQCCAHLAKEACS-----FADTNPEGFEALCHFCLEKMQEQPGVHDSSEYVLRHRLFEELLKKEEFMEAANCLGKLNLDATGGGKGYTDAQKAEVWVKVAEAYLESDETDAADNFCSKASATMQEVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSLAQSKGLEVDPDDLLQLLGKAITCAVLGKAGPQRSRQMGVLLRDERVGSLARVPGFSTHSQVLTKMYTEQILRKHDMEAFEESLMDHQKAITAEGLPIPERAVMEHNMVASTRIYENVSFKELGTLLQIPCEQAERVAARMITEGRLRGTIDQVEGLLQFEGDHD-----ELQNWDERVNILCQKVNNCCETIGNRFPHVLEP 410          
BLAST of NO15G00740 vs. NCBI_GenBank
Match: ETP00810.1 (hypothetical protein F441_21842 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 310.8 bits (795), Expect = 6.400e-81
Identity = 184/421 (43.71%), Postives = 261/421 (62.00%), Query Frame = 0
Query:    1 MVDIQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKALIDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALEKGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFSDAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKAGPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEFGKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVSESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIAAACQGVNAILEEVSKSHPELL 422
            M  + + +  I  +A Q ++    T+ YK L+             SLK ++ HLL  DV  ++SR V++ LA+  VA +   +     E +     + L K       FE+ DV FRE L      E  Y EAA  LA +NLES +R ++D +KAE YVKIAE YL EDE VDAE F+NRAS  +  V D+ ++LR++V+YA++LD+ RKFL+AALRY+E SQ+   E+ P++LL LL K+VTCAIL  AGPQRSR+LGTL+KDER        ++  +  +LEKMYMEQ++ R E+ +F KSL  HQ   L++GFT+LE A +EHN +AAS+VY +I   ELG+LLE+  + AE++AA MIGE R+KG IDQ  G L FE   +     VL  +D +I++ C  VN   E + + +P+++
Sbjct:    1 MATVDSELLRISRIADQKEK----TAAYKTLLEE-----HLHDLASLKTIVIHLLGEDVLLVISRAVITHLAS-VVAGIDVDAHPWKLEFIC----FCLAKIKPRILSFEEPDVMFRESLAAMYMDEEEYIEAAKALAAINLESSTRQYTDVEKAEKYVKIAELYLQEDETVDAENFINRASRFIHNVEDWALKLRFQVSYARILDSKRKFLDAALRYYEFSQSKSDEVDPDDLLELLSKAVTCAILASAGPQRSRLLGTLYKDERV-------KNSEYVAILEKMYMEQLIRRPELVQFEKSLLPHQKAVLSNGFTVLENAFLEHNLLAASRVYSSISLEELGKLLEIEPANAERVAATMIGEDRMKGSIDQHLGFLEFENTED----EVLAAFDTRISSLCFNVNQCAELIEQQYPDIV 396          
The following BLAST results are available for this feature:
BLAST of NO15G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009826599.12.200e-8946.70hypothetical protein H257_03969 [Aphanomyces astac... [more]
XP_008869268.12.000e-8747.60hypothetical protein H310_06122 [Aphanomyces invad... [more]
OQR96149.19.500e-8546.71COP9 signalosome complex subunit [Achlya hypogyna][more]
XP_024572366.11.600e-8444.89cop8 (constitutive photomorphogenic) homolog [Plas... [more]
XP_008613584.11.000e-8345.11hypothetical protein SDRG_09429 [Saprolegnia dicli... [more]
XP_012202738.11.400e-8345.56hypothetical protein SPRG_08000 [Saprolegnia paras... [more]
GAY02998.11.200e-8245.87COP9 signalosome complex subunit, putative [Pythiu... [more]
XP_009035151.13.700e-8146.94hypothetical protein AURANDRAFT_11912, partial [Au... [more]
CBJ26901.14.900e-8141.92conserved unknown protein [Ectocarpus siliculosus][more]
ETP00810.16.400e-8143.71hypothetical protein F441_21842 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001533NSK001533Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00740.1NO15G00740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|437761gene_4623Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_102065g1gene7927Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00740.1NO15G00740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00740 ID=NO15G00740|Name=NO15G00740|organism=Nannochloropsis oceanica|type=gene|length=4472bp
AGCCGTCGGCGTAATCTCGTGAAGGAGCTGCAGTGGGTCGACAGCCATGG
TGGACATTCAGGCAGCCATCGCGGAGgtaagcgaatgcctcccctgcccc
tcccttccttccatcctcctccctgtagcctcgcccctcgcgcgtatcaa
tgcgcgagtcttacatcctctggccgatggttaggtgggctgccatttat
agaaagcaagccagttctggacgcttatggctgaagtccctcgttcacca
caccgtccattccgaccataccctcatcctctctctccatcccactctcc
atcccatccttcccttccctccctgccccttagATCAAAGCCCTCGCCGG
GCAAGCCGATCGGACCACGCGGCAAACGTCCAAGTACAAGGAGCTCATCA
CCTCGCTGGTCAAGACCCCTCGTTTCTCCTCCTGCACCTCCCTCAAAGCC
TTGATCGACCACTTGCTTTCTCCTGATGTCCCCGCCCTAGTCTCTCGGGG
CGTCCTGTCGTTCCTCGCGACTGAAGCTGTCGCTACCCTCTCGAAAGGCA
GCAAAAATGAAGACAAAGAGGCCTTGAGAGATGTGGCAGAGTACGCCCTT
GAGAAAGGAGCGGGGCATGCCCAGGTGTTTGAGGACGCGGATGTGACCTT
TCGCGAATATTTGTTCGACTTTCTCAAGGCCGAAGGAAGTTATAAAGAGG
CGGCCACAGTGCTGGCAGgtcagtggtggtgtccttcccttgatcccttt
tacctttttctcctcgatcagtttttattgggtttggatgttttgattcg
gcaattggcctgtcgaatcaaagttgacacatagcctctcccatccctcc
catccctccccccttccccccctccttcccttccccgcagGCTTGAATCT
CGAATCTGTCTCAAGAACTTTTTCCGACGCCCAGAAGGCGGAGATCTACG
TGAAGATCGCCGAGACGTACTTGGTGGAAGACGAGGCGGTAGACGCGGAG
GCATTCGTGAATAGGGCAAGTGGACTTATGGAGGCCGTCACAGACTACTG
GGTCCAGgtgcggcgcggtggtccctctctccctctctccctctctccct
ctctccctctctctccctctctccccccccctctctctccctctcttcct
cccttccttcctccttgcttcgtgtgcgcactgttttctggtaccacaaa
cccacatttccctcctccctctcgtccttcccttccttcctccctccctc
ccccccatcaccttctcctcagCTACGCTATCGCGTTACCTACGCTAAGG
TCCTGGACGCCAACCGGAAATTTCTCGAAGCCGCCCTCCGATACCACGAG
CTGAGCCAGGCCCCACGTCGCGAGATTCCGCCAGAGGAGCTGTTGCTGCT
TCTGGGAAAGTCCGTTACGTGTGCCATTCTAGGCAAGGCCGGACCTCAAC
GGTCTCGGATCCTAGGGACGCTGCATAAGgtgggtgacgaaggagttatg
atgtcatcattatgtctgtcccctttctctttcgtttcctctttctattg
gccttggccttgtcggttttcgtgtttctcggtcggtgattttcgggggg
catgaggtgggtggccctgcgctccaccatgagagaaagtgcaagggtca
tttaaattattgctcctgttgctgttgctgttgctgttgctgctgttgtt
gctgccgttgctgttgctgttgctgctgttgttgtcgctgctgttgctac
tgttgttgctgccgttgctgttgctgtcgctgctgttgctgctgctgttg
ctgctgctgttgctgccgttgctgttgctgccgttgctgttgctgccgtt
gctgttgctgtcgctgctgttgctactgttgttgctgccgttgctgttgc
tgtcgctgctgttgctgctgctgttgctgccgttgctgttgctgtcgctg
ctgttgctactgctgttgctgccgttgctgttgctgccgttgctgttgct
gtcgctgctgttgctgccgttgctgttgctgccgttgctgttgctgccgt
tgttgctgtcgctactgctcgccagacctcgtatgaaggccggacttgca
gcgttggcgaatgtcgaatcctctaggtccctgcataaggaggatgtatc
atgccctcactccctctctccctccctcgctccctgctccttctttcccg
ttgctttcctactctgttcgctgccatctttgtctgcgtccccttctctc
atcctccccctcctccccccctcgcttcacctcccacgtctaccttcctc
cccttagGACGAGCGCACCGGGACGCTGGAAAGCTTGGAGCAGCACAAGG
CTCATGCCAAGGTCCTAGAGAAGATGTACATGGAGCAAATCCTGACCCGG
ACGGAGATGAGTGAATTCGGCAAGTCATTACAAAGGCACCAGACCGTCAA
GTTGGCTGACGGGTTTACCATCCTCGAGAAGGCCATCGTGGAGCACAACA
CGGTGGCGGCTAGCAAGgcacgtccctgtccctcccttcctccctccctc
cctccctccctccctccctcccttccatcgtccctccctccctccttccc
tccctccctccctgactctctgattccttaaccagctgcaaagaggagga
cttatttccctcattcttccttcccctcccactacccttttccctccctc
ccttcctctcccagGTGTACGACAACATCCGCTTCGCGGAACTAGGTCGC
CTACTGGAGGTGAGTGAGAGCCAAGCCGAGAAGATCGCCGCAAGAATGAT
CGGGGAAGGGAGGCTGAAAGGCTGCATCGATCAGGTGGATGGGGTCCTCA
CTTTCGAGGGTGGGAGGGAGGGAGAAGCGGCAGCAGTACTGCAGGGGTGG
GATCAAAAAATTGCGGCGGCATGTCAAGGCGTGAATGCAATACTGGAGGA
GGTGAGCAAATCACACCCGGAGTTATTGGCTCCGGAATAGGAGCAGGGAG
GAGGGGAGAAAGGGAGGGAGGGAGGGAGAGGGAGGGAAGGAGAGAGTGAA
CAAATTGTCTTAGCGAAATATTTTAAATGATCTAATACTGGTATATGGAG
GAGGGGGCTAAGGATAGAAGTGGACAAGGAAAGAGGGAGGAAAAGGGAAG
GAGGGGAGAAGAGAAGGAGAGGTAGAGGGAGAGGGATGGAATGGGAGAGA
GGGAGCGAGATGGTGAGAAGAGAAATAGTTGTAGCGGCACCTGCAATGGC
AATTGTGTTCACAGAAAGGGGGAGAAAGCTATAGCACCAGTAGTTATAGT
CGTAAGAACGCCAGACGCAAGCACATAAAAGTGACTTGGACCCGCACTTG
CGCAAAATTTGCTCCTTTTTTTTTTTTTTTCCTCCTTTGGTTCGTTCTCT
CTTCTACTTATCTTTTGTTTTCTCTCTAGCGTTGTTAGTTTTTGGGTCGT
CCCCAAACTCTCTGTGGTACTAGTATTACGTCTACTGCTACTGCTACTGC
TGCTGCTGCTGCTGCTGCTGCTGCCGACTGTCCTCCTCAGGCCTTGCTAT
CCAGAAAAACACAGACGAGGAAAGAAAGGAAGAAAGGAAGGAGGGACTCA
CCCTTCTGCTCTACCGTTTCAGCCTTCCCGCCCTCCAATTCTTTCCAGTG
TGATATTCAAACCACTCATTGTAATTAGAATGGGACATTTCTTTTCAATT
TCCAACTTACCTTCCATATCTTCCCTCCCTTTATGCCTTCTTTCCTCCTT
CCCACCAGCAGGGTCCGTCACCTACTTCCGCCGTTTTTTGAATACGCACC
ATGCAGCAATTCCCCGTGCGCCTGCTCCCGCAAGGCAAACGGCAACGCAC
ACAACTGCTCCCATGTGTATGTGGGGAAACGGGGTTCGATCCGATCTTCT
AAAAAGTTCTCGTAGCCCGGGTAGAGCCGCCGCAGCTCCTCACTCGGGCA
CACCACCAGCTTCATGCCCTCCTCCAAGCTTAATCCCGGCCGAACTTGCG
TTAAATATGAAAGTCGTCCCAGCCTCCCAAAGGCCGCGGTCAGGCATTGA
CTCCCTGCCTCCGTCCCGAGGAGGGCCACGAAGTCATCCTCCTCCAGGTC
CGGGAAGAGCGAGCGGACGAATCGCAACTTGGGCGCCACGTTGGCCGTCA
CATCCATTGCGAGGATCATGGGATTCTTGGACAGCAGCAAGTTCACGCCA
CCTACAGAACCCCCTAAGAGGGAGGAGAGGAGGTCGAGTTTCTGCGTGAG
CGCTGAGGGTGGGTGGTAGAGGATGGAGGGGAGGTGGTGGAGGATGGACG
ATGTGGTGGTGGGGCCCAGTGAGGCGAGGAGGAGGTGGAGCTGGGGAGCA
ATGACCTCCGACAGGTCGGCAGTCCAAGCGCGAGGATGCTGGCAAAGGGT
GGGGAGGAGTAGAGAGGGGGGGAGGAGAAGGGAGAGGGAGGCGAGGCGGG
TGGAGAGGGAGGGGAGGGGGAG
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protein sequence of NO15G00740.1

>NO15G00740.1-protein ID=NO15G00740.1-protein|Name=NO15G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=425bp
MVDIQAAIAEIKALAGQADRTTRQTSKYKELITSLVKTPRFSSCTSLKAL
IDHLLSPDVPALVSRGVLSFLATEAVATLSKGSKNEDKEALRDVAEYALE
KGAGHAQVFEDADVTFREYLFDFLKAEGSYKEAATVLAGLNLESVSRTFS
DAQKAEIYVKIAETYLVEDEAVDAEAFVNRASGLMEAVTDYWVQLRYRVT
YAKVLDANRKFLEAALRYHELSQAPRREIPPEELLLLLGKSVTCAILGKA
GPQRSRILGTLHKDERTGTLESLEQHKAHAKVLEKMYMEQILTRTEMSEF
GKSLQRHQTVKLADGFTILEKAIVEHNTVAASKVYDNIRFAELGRLLEVS
ESQAEKIAARMIGEGRLKGCIDQVDGVLTFEGGREGEAAAVLQGWDQKIA
AACQGVNAILEEVSKSHPELLAPE*
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Synonyms
Publications