NO15G00360, NO15G00360 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00360
Unique Name	NO15G00360
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4250
Alignment location	chr15:119230..123479 +

Link to JBrowse

Properties


Property Name	Value
Description	V-type H -transporting ATPase 54 kD subunit

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:119230..123479 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0046961	proton-transporting ATPase activity, rotational mechanism
GO:0046961	proton-transporting ATPase activity, rotational mechanism

Vocabulary: **Cellular Component**
Term	Definition
GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain
GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport
GO:1902600	proton transmembrane transport
GO:0006811	ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR004908	ATPase_V1-cplx_hsu
IPR011987	ATPase_V1-cplx_hsu_C

Homology

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_009838905.1 (hypothetical protein H257_13146 [Aphanomyces astaci] >ETV71717.1 hypothetical protein H257_13146 [Aphanomyces astaci])

HSP 1 Score: 302.4 bits (773), Expect = 2.400e-78
Identity = 185/467 (39.61%), Postives = 267/467 (57.17%), Query Frame = 0

Query:    6 STPPPASS--DPVGGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD-------------DKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--LLFQVLDGDLDTFVSKI-----SSELSN--SRNKSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            S PP +SS  + V  +  D  + +E+ LA F  I+W  Y R     LD  E+  +K  +             D  +D  L + G  T L + LLKL+ +++E  V +YA   I+D+L +     +RA  F  +G    +A PFLR       Y + +A  ILA  L F+  + D+ + +  I     +S  SN  +R  + +  ++ L +LLR+E AR  F   GG+  L  LLK   S G AQL YE+ FC+WTL+F EE    F  +G +  + +QV  APREKV+RVAL AL NL   +  A N  M+  GL KTL NL DRKWTD+++   +  + + L ++ +EL+T ERY  EV +G L WG++H+DKFW+ENV + EANDF +++ LI LL S+D + VA+A YD+G+F RFYPNG+ I K  GAK   M L+ H NP+V + AL C+SK+MV  W  ++
Sbjct:    2 SVPPASSSVLEAVKANVLDVALAREEALAKFKDINWATYTRAGGFSLDKTEIAAIKEMEIVAKNASQNEDQADALIDTFLREYG--TALGAGLLKLIKNVTEPSVLRYAFARIDDLLPDGGRSRKRATYFVGEGAYV-EAAPFLRLLRSESGYTQYAAGHILAQFLTFRPKEQDIVSLIQWILDAVKASAQSNDVARAATARNAITTLMVLLRNETARKLFTRAGGLASLADLLKY--SQGKAQLAYEVCFCLWTLSFSEEAVDAFGTSGAISALIQQVVAAPREKVVRVALEALQNLLGKQNGAYNERMLDGGLLKTLTNLRDRKWTDEDITKSITAIRDVLIREFKELNTMERYEKEVRTGLLTWGLLHTDKFWRENVMAFEANDFALIRLLIELLESDDPKTVAVALYDLGDFVRFYPNGKHIAKRLGAKKVAMKLMTHENPDVQKQALTCISKMMVNKWEFVK 463

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_008869403.1 (hypothetical protein H310_06210 [Aphanomyces invadans] >ETW01555.1 hypothetical protein H310_06210 [Aphanomyces invadans])

HSP 1 Score: 297.4 bits (760), Expect = 7.600e-77
Identity = 175/457 (38.29%), Postives = 259/457 (56.67%), Query Frame = 0

Query:   14 DPVGGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD-------------DKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--LLFQVLDGDLDTFVSKISSELSNSRNKSIKVI-------VSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            + V  +  D  + +E+ LA F  I+W  Y R     LD  E+  +K  +             D  +D  L + G A  L + LLKL+ +++E  V +YA   I+D+L +     +RA  F PD G   +A PFLR       Y + +A  ILA  L F+  + D+ + +  I   +  S   S   +       ++ L +LLR E AR  F   GG+  L  +LK   S G AQL YE+ FC+WTL+F +E    F ++G +  + +QV  APREKV+RV+L AL+NL      A N  M+  GL KTL NL DRKWTD+++   +  + + L ++ +EL+T ERY  EV +G L WG++H++KFW+ENV S EAN+F++++ LI LL S+D + V++A YD+G+F RFYPNG+ I K  GAK   M L+ H N EV ++AL C+SK+MV  W  ++
Sbjct:   10 EAVKANALDVALAREEALAKFKDINWATYTRAGGFSLDKAEITAIKEMETVAKNASQNEDQTDSLIDTFLREYGAA--LGAGLLKLIKNVTEPSVLRYAFARIDDLLPDGGRSRKRATYFVPD-GTYVEAAPFLRLLRSESGYTQYAAGHILAQFLTFRGKEQDIVSLIQWILDAVKASAQSSDTALGATARNAITTLMVLLRCETARKLFTRAGGLASLADVLK--NSQGKAQLAYEVCFCLWTLSFSDEAIEAFGSSGAITALIQQVVAAPREKVVRVSLEALENLLGKANGAYNERMIDGGLLKTLTNLRDRKWTDEDIAKSITAIRDVLIREFKELNTMERYEKEVRTGSLAWGLLHTEKFWRENVMSFEANEFELIRLLIDLLESDDPKTVSVALYDLGDFVRFYPNGKHIAKRLGAKKVAMKLMTHENAEVQKHALTCISKMMVNKWEFVK 461

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: OQS05413.1 (V-type proton ATPase subunit H [Thraustotheca clavata])

HSP 1 Score: 295.4 bits (755), Expect = 2.900e-76
Identity = 172/449 (38.31%), Postives = 255/449 (56.79%), Query Frame = 0

Query:   22 DTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD-------------DKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--LLFQVLDGDLDTFVSKISSELSNS-------RNKSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            D  + +E+ LA F  I+W  Y R     LD  E+  +K  +             D  +D  L + GDA  L   LLKL+ +++E  V +YA   I+++L +   L +R   F P+ G   DA PFLR       Y + +A  ILA  L  +  + D+   +  I   L  S       R  + +  V+ L +LLR+  AR+ F    G+  ++++LK   S G AQL YEL+FC+WTL+F  E    F ++G +  + +QV  APREKV+RVAL AL NL   +    N  M+  GL KTL NL +RKWTD+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFW+EN  S E  +F++++ LI LL SED + VA+A YD+G+F RFYPNG+ I K  GAK   M L+ H N EV ++ALQC+SK+MV  W  ++
Sbjct:   16 DVALAREEALAKFKDINWGTYSRPGGFSLDKNEISAIKEMETIAKTALQNEDQTDAIIDTFLKESGDA--LGHGLLKLIKNVTEPSVLRYAFARIDELLPDGGRLRKRIGYFIPE-GTPIDAAPFLRLLRSETGYTQYAAGYILAQFLTVRPKEQDIAALIQWILDALKASAQMTDPVRAAAARNAVTTLMVLLRNNSARVLFAKADGLRSISEVLK--NSQGRAQLAYELSFCLWTLSFCSEAVEKFGSSGALNALIQQVIAAPREKVVRVALEALQNLLGKKNGTYNEAMIDGGLLKTLTNLRERKWTDEDITKSIQSVRDVLIREFKELNTMERYEKELRTGALNWGLLHTDKFWRENYMSFETKEFELIRLLIDLLESEDPKTVAVALYDLGDFVRFYPNGKHIAKRLGAKKVAMKLMTHENAEVQKHALQCISKMMVNKWEFVK 459

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_012202435.1 (hypothetical protein SPRG_08077 [Saprolegnia parasitica CBS 223.65] >KDO26787.1 hypothetical protein SPRG_08077 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 293.9 bits (751), Expect = 8.400e-76
Identity = 172/449 (38.31%), Postives = 254/449 (56.57%), Query Frame = 0

Query:   22 DTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD-------------DKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--LLFQVLDGDLDTFVSKISSELSNSRN-------KSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            D  + +E+ LA F  I+W  Y R     LD  E+  +K  +             D  +D  L + G+   L   LLKL+ +++E  V +YA   I+++L +   L +R   F P+ G T DA PFLR       Y + +A  ILA  L  +V + D+   +  I   L  S N        + +  V+ L +LLR+  ARL F    G+  + +++K     G AQL YEL+FC+WTL+F  +    F ++G V  + +QV  APREKV+RVAL AL NL   +    N  M+  GL KTL NL DRKWTD+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFW+EN  + E  +F++++ LI LL SED + VA+A YDIG+F RFYPNG+ I K  GAK   M L+ H N EV ++ALQC+SK+MV  W  ++
Sbjct:   16 DVALAREEALAKFKDINWGTYSRPGGFSLDKHEISAIKEMETTAKNAAAHEEQADAVIDTFLRESGEF--LGHGLLKLIKNVTEPSVLRYAFARIDELLPDGGRLRKRIEYFVPE-GTTVDAAPFLRLLRSETGYTQYAAGHILAQFLTVRVKEQDIAALIQWILDALKASANMVDAARAAAARNAVTTLMVLLRNNTARLLFTKADGMKSVAEVMK--NCQGRAQLAYELSFCLWTLSFCPDAMEKFGSSGAVHALIQQVIAAPREKVVRVALEALQNLLGKQNGQYNESMIDGGLLKTLTNLRDRKWTDEDITKSIQAVRDVLIREFKELNTMERYEKELRTGALNWGLLHTDKFWRENYMAFELKEFELIRLLIELLESEDPKTVAVALYDIGDFVRFYPNGKHIAKRLGAKKVAMKLMTHENAEVQKHALQCISKMMVNKWEFVK 459

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: OWZ12621.1 (V-type proton ATPase subunit H [Phytophthora megakarya])

HSP 1 Score: 293.9 bits (751), Expect = 8.400e-76
Identity = 172/456 (37.72%), Postives = 253/456 (55.48%), Query Frame = 0

Query:   17 GGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILK------------ACDDKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILALLFQVLDGDLDTFV------------SKISSELSNSRNKSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            G    D  +D+E+ L  F  I+W  Y R     L+  E+  LK            A + K +D  ++D G    + S LLKLV +++E  V +Y L  +E++L +   L +R + F P+ G T DA PFLR       Y + +A+ +LAL   +     D               +  SS    +R    +  VS L +LLR+EK R+ F   GGV  +  L  L+ S   AQL YELTF +WTL F +E    F+A   +  + +QV+ APREKV+RVAL AL NL        N  M+  GL KTL N+ +RKW D+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFWK+N  + E  DF++++ LI LL S+D + V++A +D+GEF RFYPNG+ I K  GAK  TM L+ H N EV + ALQC+SK+MV  W  ++
Sbjct:   13 GSGSLDVALDREEALHRFRDINWATYTRVGGFSLEKTEITALKDLEGVIKPGADDAANVKAVDEFMSDAG--LLVGSALLKLVKNVTEPTVLKYCLARMEELLPDGLRLHKRMVFFVPE-GSTVDAAPFLRMIRNDTGYMQYAASHLLALFLTIRPRQEDAEALSQWEIQALKTGALPSSTNDFTRANVTRAAVSSLMVLLRNEKMRVVFIKLGGVAPVVDL--LESSQNRAQLAYELTFILWTLAFCDEALEKFVAAKALDAIVQQVAAAPREKVVRVALEALQNLLGKLSGFFNERMIDSGLLKTLNNMRERKWADEDIAKGIQAIRDVLIREYKELNTMERYEKELRTGTLNWGLLHTDKFWKDNFMTFENKDFELIRLLIDLLESDDPKTVSVALFDLGEFVRFYPNGKHIAKRLGAKKVTMKLMTHENAEVQKQALQCISKMMVNKWEFVK 463

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: GAX95607.1 (V-type proton ATPase subunit H, putative [Pythium insidiosum])

HSP 1 Score: 292.7 bits (748), Expect = 1.900e-75
Identity = 172/469 (36.67%), Postives = 261/469 (55.65%), Query Frame = 0

Query:   22 DTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD--DKP---------LDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSEDLP-QRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--------LLFQVLDGDLDTFVSKI----------------------SSELSNSRNKS--IKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            D  + +E+ L  F  I+W  Y R     LD EE+  LK  +   KP         +D  L D G    L S LLKLV +++E  V +Y L  +E++L + L  ++ + +  D GK  DA PFLR       Y + +AA +LA        L+++ L  D    +  +                      S+   N  N++   +  V+ + +LLR +K+R+ F    GV  + +LLK   S   AQL YELTF +WTL+F +E    F+++G + V+ +Q+ +APREKV+RVAL  L NL           M+  GL KTL NL +RKW D+++  +++ + + L ++ +EL+T ERY  E+ +GQL WG++H+DKFWKEN  + E  +F++++ LI LL ++D + V++A +DIGEF RFYPNGR I K  GAK   M L+ H NPEV ++ALQC+SK+MV  W  ++
Sbjct:   24 DVALAREEALHRFRDINWATYTRAGGFSLDKEEINALKEIEAIAKPGAEDTNTNAVDDFLLDSGRV--LGSALLKLVKNVTEPTVVKYTLARMEELLPDGLRLRKRVAYFVDEGKALDAAPFLRMIRNDTGYVQYAAAHLLALFLTSMVLLVYRGLIADAKWSIDSVRPRFEDVDALCQWAVQALKLGPSTNSLNDPNRANVTRAAVASMMVLLRHQKSRVVFVKQSGVTPIVELLK--NSQNRAQLSYELTFLLWTLSFCDEAMDKFVSSGALDVLIQQIVSAPREKVVRVALETLQNLLGKFSGYFTERMIDGGLLKTLNNLKERKWADEDVTKNIQSIRDVLMREYKELNTMERYEKELRTGQLNWGLLHTDKFWKENFMAFENKEFELIRLLIDLLEADDPKTVSVALFDIGEFVRFYPNGRHIAKRLGAKKVVMKLMTHENPEVQKHALQCISKMMVNKWEFVK 488

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BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_009529196.1 (hypothetical protein PHYSODRAFT_505321 [Phytophthora sojae] >EGZ15447.1 hypothetical protein PHYSODRAFT_505321 [Phytophthora sojae])

HSP 1 Score: 292.4 bits (747), Expect = 2.400e-75
Identity = 172/456 (37.72%), Postives = 251/456 (55.04%), Query Frame = 0

Query:   17 GGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILK------------ACDDKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILALLFQVLDGDLD-------TFVSKISSELSNSRNKS-----IKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            G    D  + +E+ L  F  I+W  Y R     L+  E+  LK            A + K +D  ++D G    + S LLKLV +++E  V +Y L  +E++L +   L +R + F P+GG   DA PFLR       Y + +A+ +LAL   +     D          +  +  L  S N S      +  VS L +LLR+EK R+ F   GGV  + +L  L+ S   AQL YELTF +WTL F  E    F+A   +  +  QV+ APREKV+RVAL AL NL        N  M+  GL KTL N+ +RKW D+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFWK+N  + E  DF++++ LI LL S+D + VA+A +D+GEF RFYPNG+ I K  GAK   M L+ H N EV + ALQC+SK+MV  W  ++
Sbjct:   13 GSGSLDVALAREEALHRFRDINWATYTRAGGFSLEKTEINALKDLEGVIKPGADDATNVKAVDEFMSDAGPL--VGSALLKLVKNVTEPTVLKYCLARMEELLPDGLRLHKRMVYFVPEGGNV-DAAPFLRMIRNDTGYMQYAASHLLALFLTIRPRQEDAEALGQWVIQALKTGALPTSTNDSTRANVTRAAVSSLMVLLRNEKLRVVFVKQGGVAPVVEL--LESSQNRAQLAYELTFILWTLAFCNEAMEKFVAAKALDAIVLQVAAAPREKVVRVALEALQNLLGKLSGFFNERMIDSGLLKTLNNMRERKWADEDIAKGIQAVRDVLIREYKELNTMERYEKELRTGTLNWGLLHTDKFWKDNFMTFENKDFELIRLLIDLLESDDSKTVAVALFDLGEFVRFYPNGKHIAKTLGAKKVAMKLMTHENAEVQKQALQCISKMMVNKWEFVK 463

[Close]

BLAST of NO15G00360 vs. NCBI_GenBank
Match: POM61804.1 (V-type proton ATPase subunit H [Phytophthora palmivora var. palmivora])

HSP 1 Score: 292.0 bits (746), Expect = 3.200e-75
Identity = 172/456 (37.72%), Postives = 253/456 (55.48%), Query Frame = 0

Query:   17 GGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILK------------ACDDKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILALLFQVLDGDLD-------TFVSKISSELSNSRNKS-----IKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            G    D  + +E+ L  F  I+W  Y R     L+  E+  LK            A + K +D  ++D G    + S LLKLV +++E  V +Y L  +E++L +   L +R + F P+ G T DA PFLR       Y + +A+ +LAL   +     D       T  +  +  L  S N S      +  VS L +LLR+EK R+ F   GGV  +  L  L+ S   AQL YELTF +WTL F +E    F+A   +  + +QV+ APREKV+RVAL AL NL        N  M+  GL KTL N+ +RKW D+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFWK+N  + E  DF++++ LI LL S+D + V++A +D+GEF RFYPNG+ I K  GAK   M L+ H N EV + ALQC+SK+MV  W  ++
Sbjct:   13 GSGSLDVALAREEALHRFRDINWATYTRVGGFSLEKTEITALKDLEGVIKPGADDAANVKAVDEFMSDAGPL--VGSALLKLVKNVTEPTVLKYCLARMEELLPDGLRLHKRMVYFVPE-GSTVDAAPFLRMIRNDTGYMQYAASHLLALFLTIRPRQEDAEALSQWTIQALKTGALPTSTNDSTRANVTRAAVSSLMVLLRNEKLRVVFVKVGGVAPVVDL--LESSQNRAQLAYELTFILWTLAFCDEALEKFVAAKALDAIVQQVAAAPREKVVRVALEALQNLLGKLSGFFNERMIDSGLLKTLNNMRERKWADEDIAKGIQAIRDVLIREYKELNTMERYEKELRTGTLNWGLLHTDKFWKDNFMTFENKDFELIRLLIDLLESDDPKTVSVALFDLGEFVRFYPNGKHIAKRLGAKKVAMKLMTHENAEVQKQALQCISKMMVNKWEFVK 463

[Close]

BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_008617905.1 (hypothetical protein SDRG_13586 [Saprolegnia diclina VS20] >EQC28713.1 hypothetical protein SDRG_13586 [Saprolegnia diclina VS20])

HSP 1 Score: 291.6 bits (745), Expect = 4.200e-75
Identity = 171/449 (38.08%), Postives = 253/449 (56.35%), Query Frame = 0

Query:   22 DTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILKACD-------------DKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILA--LLFQVLDGDLDTFVSKISSELSNSRN-------KSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            D  + +E+ LA F  I+W  Y R     LD  E+  +K  +             D  +D  L + G+   L   LLKL+ +++E  V +YA   I+++L +   L +R   F P+ G T DA PFLR       Y + +A  ILA  L  +V + D+   +  I   L  S N        + +  V+ L +LLR+  ARL F    G+  + +++K     G AQL YEL+FC+WTL+F  +    F ++G V  + +QV  APREKV+RVAL AL NL   +    N  M+  GL KTL NL DRKWTD ++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFW+EN  + E  +F++++ LI LL SED + VA+A YD+G+F RFYPNG+ I K  GAK   M L+ H N EV ++ALQC+SK+MV  W  ++
Sbjct:   16 DVALAREEALAKFKDINWGTYSRPGGFSLDKHEISAIKEMETTAKNAAAHEEQADVVIDTFLRESGEF--LGHGLLKLIKNVTEPSVLRYAFARIDELLPDGGRLRKRIEYFVPE-GTTVDAAPFLRLLRSETGYTQYAAGHILAQFLTVRVKEQDIAALIQWILDALKASANMVDAARAAAARNAVTTLMVLLRNNTARLLFTKADGMKSVAEVMK--NCQGRAQLAYELSFCLWTLSFCPDAVEKFGSSGAVHALIQQVIAAPREKVVRVALEALQNLLGKQNGQYNESMIDGGLLKTLTNLRDRKWTDDDITKSIQAVRDVLIREFKELNTMERYEKELRTGALNWGLLHTDKFWRENYMAFELKEFELIRLLIELLESEDPKTVAVALYDLGDFVRFYPNGKHIAKRLGAKKVAMKLMTHENAEVQKHALQCISKMMVNKWEFVK 459

[Close]

BLAST of NO15G00360 vs. NCBI_GenBank
Match: XP_024586877.1 (v-type proton atpase subunit h-like [Plasmopara halstedii] >CEG50508.1 v-type proton atpase subunit h-like [Plasmopara halstedii])

HSP 1 Score: 291.6 bits (745), Expect = 4.200e-75
Identity = 169/456 (37.06%), Postives = 252/456 (55.26%), Query Frame = 0

Query:   17 GGDPADTLIDKEQVLATFSGISWDKYGRT---MLDAEEVKILK--------ACDD----KPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHIEDILSED--LPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILALLFQVLDGDLDTFV------------SKISSELSNSRNKSIKVIVSPLALLLRSEKARLAFGAHGGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPVVAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLDRKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDKFWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIR 444
            G    D  + +E+ L  F  I+W  Y R     L+  E+  LK          DD    K +D  ++D G    + S LLKLV +++E+ V +Y L  +E++L +   L +R + F P+GG T DA PFLR       Y + +A+ +LA+   +     D               +  +S             V+ L +LLR+EK R+ F   GGV  +  L  L+ S   AQL YELTF +WTL F +E    F+A   +  + +QV+ APREKV+RVAL AL NL        N  M+  GL KTL N+ +RKW D+++   ++ + + L ++ +EL+T ERY  E+ +G L WG++H+DKFWK+N  + E  DF++++ LI LL S+D + V+++ +D+GEF RFYPNG+ I K  GAK  TM L+ H NPEV + ALQC+SK+MV  W  ++
Sbjct:    3 GNGSLDVALSREEALHRFRDINWATYTRAGGFSLEKTEIAALKNLESVIKPGVDDMSNIKAVDEFMSDSGPL--VGSALLKLVKNVTELTVLRYCLARMEELLPDGLRLHKRMVYFIPEGG-TLDAAPFLRMIRSDTGYTQYAASHVLAIFLTIRPRQEDAEALCQWAIQALKTGALPTSTSDXXXXXXXXAAVASLMVLLRNEKLRVVFVKLGGVPPVVDL--LESSQNRAQLAYELTFILWTLAFCDEAMEKFVAAKALDAIVQQVAAAPREKVVRVALEALQNLLGKLSGFFNERMIDSGLLKTLNNMRERKWADEDIVKGIQAVRDVLVREYKELNTMERYEKELRTGTLNWGLLHTDKFWKDNFMTFENKDFELIRLLIDLLESDDPKTVSVSLFDLGEFVRFYPNGKHIAKRLGAKKMTMKLMTHENPEVQKQALQCISKMMVNKWEFVK 453

The following BLAST results are available for this feature:

BLAST of NO15G00360 vs. NCBI_GenBank

BLAST of NO15G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_009838905.1	2.400e-78	39.61	hypothetical protein H257_13146 [Aphanomyces astac...	[more]
XP_008869403.1	7.600e-77	38.29	hypothetical protein H310_06210 [Aphanomyces invad...	[more]
OQS05413.1	2.900e-76	38.31	V-type proton ATPase subunit H [Thraustotheca clav...	[more]
XP_012202435.1	8.400e-76	38.31	hypothetical protein SPRG_08077 [Saprolegnia paras...	[more]
OWZ12621.1	8.400e-76	37.72	V-type proton ATPase subunit H [Phytophthora megak...	[more]
GAX95607.1	1.900e-75	36.67	V-type proton ATPase subunit H, putative [Pythium ...	[more]
XP_009529196.1	2.400e-75	37.72	hypothetical protein PHYSODRAFT_505321 [Phytophtho...	[more]
POM61804.1	3.200e-75	37.72	V-type proton ATPase subunit H [Phytophthora palmi...	[more]
XP_008617905.1	4.200e-75	38.08	hypothetical protein SDRG_13586 [Saprolegnia dicli...	[more]
XP_024586877.1	4.200e-75	37.06	v-type proton atpase subunit h-like [Plasmopara ha...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL145	nonsL145	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR006	ncniR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR095	ngnoR095	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001578	NSK001578	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO15G00360.1	NO15G00360.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|587072	gene_4587	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100342g7	gene9618	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO15G00360.1	NO15G00360.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO15G00360 ID=NO15G00360|Name=NO15G00360|organism=Nannochloropsis oceanica|type=gene|length=4250bp
TAGAACGCCCGCCGTGTCTGGGTCGTCCTAGTGGATTCTAACCTAGTAAA
CCATCGTGTTGGTGTCCCCCGTCCACGACTATGCATCCGTGTCGTTGTCC
TAACACGCGCGGCGTGGCCGCTTCTTTGTCACGAGGGCGTTGCATGTGTG
TGGTTTGCGCAGGCGAAGGTGCTTTGTGGGAATGACCTCCTGCCATGCTC
GGATTCAATCTCGAGACCGTCTGTCTGTATGTCCACTGCCTTCGTCCATT
GCCCTCTTCCCTATCGAAGCCTCACGATTCCCCTTGTCTCCATCATCCTA
CCTACGTTCTCACAGGGCATAGACTTGCTGGCCCTTTGCTGCTTTCCAAG
GAGACCATTGTGGGAAGGACCGCGCGAGACCACCATCATCAGCAGAGCGG
CAGCAGCAGCAGCAGCAAGAGGAGAAGATGACTGACGCTCCATCGACACC
CCCTCCTGCCTCCTCCGACCCCGTGGGAGGAGATCCGGCTGATACCCTCA
TTGATAAGGAGCAGGTGTTGGCCACGTTTTCCGGAATTAGTTGGGACAAG
TACGGAAGGACGATGCTGGACGCGGAAGAGgtgagcagagggaggatgga
ggaaggagaggggtgacggttcggtacttaatcacgacaaagaggtgaat
cgagatagggctatgcccttgggtgatgcctgactccgtggagaagagaa
tgcacgcaggttgacaagccaggcggccctgtcccggaccttccacctct
gacctttccctcccttaatccctccctccctttcttcagGTCAAAATCCT
CAAGGCCTGCGACGACAAACCCCTGGACTTCCTCCTTGCCGACAAAGGGG
ACGCGACCAAGCTGGCCAGCACATTGTTGAAGCTGGTGTCGTCGATGAGC
GAGGTGGTGGTGCAGCAGTACGCTCTGACGCACATCGAGGACATTTTGTC
CGAAGATCTACCCCAGgtatgcacgtgccctacttccctccctccctccc
tccctccctccctccctccctccctcccctcccctcctccctccttttgc
ttcctcctctttattcctccctctcttccttcctttcccccccctccctc
ccttcccttccttccctttgtctccctccttcgaggacatgtttgttctg
acatctctcaccaggatttgctcgtgttgtttaaatcttccctccttccc
tccctcctctcttatctcgccctcctcctcctcctcctccttcctctttt
tccagCGCGCCCTCCTCTTCTCCCCCGACGGCGGCAAGACTTTTGACGCC
ACTCCTTTTCTCCGCGCCTTTGACCAGGGCGACTTGTACTGCAAGAAGAG
TGCCGCCACCATCCTCGCACTCCTCTTTCAGgtatatccctccctccctc
cctcccaccctcccaccctctgttccttccattgcactacgcagtcgatc
ggactccccctctttccgtctaattccaccccctccctccctccctccct
ccctccctccctccctccctccctccccagGTTCTGGACGGTGACCTCGA
CACGTTCGTCTCCAAGATCTCGAGCGAGCTTAGCAACTCCAGGAATAAGA
GCATCAAGgtacgccctccctcccgccctccctcgtttcctccttgataa
tacacccgcttgtgttgtttacttcctttcatcctccctccctccctccc
tccctccctccccagGTCATCGTCTCTCCTCTCGCCCTCCTCCTCCGGTC
AGAGAAGGCCCGGCTTGCCTTCGGTGCCCACGGAGGCGTCGGCTACCTGA
CTAAACTGCTCAAGCTTCAGgtaccctccctcctcaccgccctcccgccc
tctctccctcccaccgtctctgctgtcgaccgcaccgtttcgtttccctg
ttgtctttttcaacctactttctccctccctcccaccctccctccttctt
tcaaccgccttttcgtcttctgaccgacctccctccctccctccctccct
ccttccctccctccctccctccgctcccagGGAAGCCACGGGAACGCCCA
GCTGCTGTACGAGCTCACCTTCTGCATATGGACCCTCACCTTCCACGAGG
AGgtcagtcccccccctccctcccccttccctcttcctcttccttttctt
aacccttccctccctcccctcgtcccccccttcctccctccctccagCTT
AAATCGGACTTCATCGCCAACGGGACTGTGCCTGTCGTCGCCGAGCAGgt
acctccctccctccctccttccctcccctgccctcctcgtcctctctctc
tttctctctttctctctttaggaaagattgagaacaatagaaggtggata
ctcacaaccctccctccctccctccctccctccctccctccctccctcag
GTCTCCACCGCCCCCCGGGAGAAGGTCATCCGGGTAGCGTTGGCCGCGCT
CGACAATCTCTGCTACGGCCGTCTGGACGCGCTTAATGCCGAGATGGTCG
GGTGTGGCTTACCAAAAACCCTCGAGAACCTCCTCGACAGGAAGTGgtgc
gcccccctccccccttccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctctcttgaccggctgctcttctctc
ccttcctccctccctcagGACGGACCAGGAGCTCAAGGCCGACCTGGAAC
ACCTCCATGAGGCCCTGCAGAAAGACTCCCGCGAGCTCAGgtaactctcc
ctccctccctctctttctccctcccgcccgcccgccctcccgttggcgag
ctgcaacgaagcatcgtcatggacaccctcctccccttccccaccactcc
cttcctccctccccccctcctccagCACCTTCGAGCGCTACACCGCCGAG
GTAGCCTCTGGCCAGCTGCGTTGGGGTATCGTGCATTCAGATAAATTCTG
GAAGGAGAACGTCCGTAGCCTCGAAGCCAACGACTTCAAAATTCTCAAgt
acgtactcctccctccttccctccttccctccctccctccttccctctac
ggtctcctcttcccgcgtcccgcaggtctccagcagtgtctccctccttc
cttccttcacacatcctctcttcacgaggtgcggctctctcatccctctt
tcccttcctccctccctccctccctccctccctccctcccctccttccac
cctaagGTCTCTCATCTCCCTCCTTGCCTCAGAGGACGAGGAGGTTGTGG
CCATCGCCTGCTATGACATCGGAGAATTTGCACGTTTCTACCCCAACGGC
CGCAGgtacgttacctccctccctccctccctccctccctccctccctcc
cttcttccctcttcagtgtgtgcatgcgtttttccctttcccccttgata
cttctgccctccccactcacccttccctctttccctccctcagcatcatc
aagctttttggcgcgaaggacaagacgatgcacctcatcgagcgtccaat
ccatcacttacctttcccacccctccctctttccctccctcagCATCGTC
AAGCTTTTTGGCGCGAAGGACAAGACGATGCACCTCATCGAGCATCCCAA
CCCGGAGGTAGCACGATATGCTCTGCAGTGTGTTTCCAAGgtagggaggg
agggttggagggacggagggggtaatgttcgaagaaaggatgtggtatca
agatttcacgtaattcgttctttcttcctctctccttccctccctccctc
cttccctccctctctccctctttcccttcctccctccctagATCATGGTG
GTAAACTGGGCGCATATTCGATCATAAGCAGCGGGGACGGAAGGAGGGAG
GGAGGGGGGGGGGAGAGGCTACTGTTGTGTTTCAGAAGGTTTGGATTTTC
AAAGAAGAAGGAGGGACAGAAGAAGTCAGGAAGGGAGGGAGGGAGGGAAG
AGCTCCACCTCCGGTTGGATTTTGAGGTAGCACTATCATATTGGTATGTG
TTAGAAGAGAGATATGGAGGGAGGGAGGGAGAGAGGGACAGCAGTTGTGG
GGACCAGTGTGTGTATGCGGGAGTGTGTGTAGGTGTGTGTCTCTGAGAGA
GGGGCGAGATTGAGTAATGATGTTTTTGGAGCCTCATTCATCCTTGTACG
GGGGATGTGCTTGTGTAGAAGACGAAGAAAGAGGAGGAGGAGGAGGAGGA
GGAGGACATGGAAAAAGAAGAGGAAAAAGAAGAAGACGAAGAAGAAGAAG

protein sequence of NO15G00360.1

>NO15G00360.1-protein ID=NO15G00360.1-protein|Name=NO15G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bp
MTDAPSTPPPASSDPVGGDPADTLIDKEQVLATFSGISWDKYGRTMLDAE
EVKILKACDDKPLDFLLADKGDATKLASTLLKLVSSMSEVVVQQYALTHI
EDILSEDLPQRALLFSPDGGKTFDATPFLRAFDQGDLYCKKSAATILALL
FQVLDGDLDTFVSKISSELSNSRNKSIKVIVSPLALLLRSEKARLAFGAH
GGVGYLTKLLKLQGSHGNAQLLYELTFCIWTLTFHEELKSDFIANGTVPV
VAEQVSTAPREKVIRVALAALDNLCYGRLDALNAEMVGCGLPKTLENLLD
RKWTDQELKADLEHLHEALQKDSRELSTFERYTAEVASGQLRWGIVHSDK
FWKENVRSLEANDFKILKSLISLLASEDEEVVAIACYDIGEFARFYPNGR
SIVKLFGAKDKTMHLIEHPNPEVARYALQCVSKIMVVNWAHIRS*

Synonyms

Publications