NO15G00320, NO15G00320 (gene) Nannochloropsis oceanica

Overview
NameNO15G00320
Unique NameNO15G00320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2132
Alignment locationchr15:97675..99806 +

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Properties
Property NameValue
DescriptionPrefoldin subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:97675..99806 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
BLAST of NO15G00320 vs. NCBI_GenBank
Match: EWM20801.1 (prefoldin subunit [Nannochloropsis gaditana])

HSP 1 Score: 251.9 bits (642), Expect = 1.400e-63
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0
Query:    1 MASVVGEREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMSHMSEARQAQLAA 161
            MASVVGEREIDLSKLSIEQLNQLKTQL EELE IT+HYASLR AQSRLN CRT+V+ELAPT  G EILVPLTQSLYVPG  S+ADKVL+DVGTGYY+EKTLP+AK+Y++K+IAV+NTNAESVAQ+L QKE+SLRMVSGYFQKKLMVMS  S+ARQAQ AA
Sbjct:    1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAA 160          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: XP_005852487.1 (prefoldin subunit 5 [Nannochloropsis gaditana CCMP526] >EKU23344.1 prefoldin subunit 5 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 194.5 bits (493), Expect = 2.600e-46
Identity = 105/148 (70.95%), Postives = 120/148 (81.08%), Query Frame = 0
Query:   28 SEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPE---------------GTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMSHMSEARQAQLAA 161
            S ELE IT+HYASLR AQSRLN CRT+V+ELAPT                 G EILVPLTQSLYVPG  S+ADKVL+DVGTGYY+EKTLP+AK+Y++K+IAV+NTNAESVAQ+L QKE+SLRMVSGYFQKKLMVMS  S+ARQAQ AA
Sbjct:    3 SVELETITRHYASLREAQSRLNGCRTSVNELAPTKNASVVLPLIPLLPLALGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAA 150          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: OAX39842.1 (Prefoldin-domain-containing protein [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 115.9 bits (289), Expect = 1.200e-22
Identity = 57/146 (39.04%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    1 MASVVGE--REIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKL 145
            MAS+ G   ++++++ L ++QL+ ++ QL EEL  +T  +A L+ AQ++  SC   V E+ P  +GT ILVPLT SLYVPG+ S+++ V++DVGTGYYV+K+  +A  Y + ++  + TN ES+   + +K++++  +    Q KL
Sbjct:    1 MASISGSQPQQVNVADLDLQQLSDVRRQLEEELNHLTNSFAQLKQAQAKFKSCIENVGEVKPQNKGTTILVPLTNSLYVPGHLSDSENVIVDVGTGYYVKKSRVQATKYYETKVEYIRTNLESLQDTIQKKQENMNYLINVMQVKL 146          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: OEU09628.1 (Prefoldin alpha subunit [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 115.2 bits (287), Expect = 2.000e-22
Identity = 56/158 (35.44%), Postives = 101/158 (63.92%), Query Frame = 0
Query:    2 ASVVGEREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMSHMSEARQAQLA 160
            + V     IDL KLS+++LNQ K Q   +L+ +T HYA LR A +RL +    +SEL+P+ EG E+++PLT+S+YVPG   E +++L+++GTG+YVEK      D++++++ +V+ N+E++ + +    Q++  V+   Q K+  +    E ++ + A
Sbjct:    3 SDVAAPGTIDLDKLSLDELNQAKQQEEGKLQALTNHYAQLRAAAARLTASTNAISELSPSSEGKEVMIPLTESVYVPGKLREPNRLLVEIGTGFYVEKESSETIDFLERKLKIVDANSENITKAVQATRQNIDSVNMSMQGKMTEIRARQEGQRYRAA 160          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: OJA16636.1 (hypothetical protein AZE42_04036 [Rhizopogon vesiculosus])

HSP 1 Score: 115.2 bits (287), Expect = 2.000e-22
Identity = 57/146 (39.04%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    1 MASVVGE--REIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKL 145
            MAS  G   ++++++ L ++QL+ ++ QL EEL  +T  +A L+ AQ++  SC   V E+ P  +GT ILVPLT SLYVPG+ S+++ V++DVGTGYYV+K+  +A  Y + ++  + TN ES+   + +K++++  +    Q KL
Sbjct:    1 MASTSGSQPQQVNVADLDLQQLSDVRRQLEEELNHLTNSFAQLKQAQAKFKSCIENVGEVKPQNKGTTILVPLTNSLYVPGHLSDSENVIVDVGTGYYVKKSRAQATKYYETKVEYIRTNLESLQDTIQKKQENMNYLINVMQVKL 146          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: XP_007868640.1 (hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539] >EPQ53394.1 hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539])

HSP 1 Score: 114.8 bits (286), Expect = 2.600e-22
Identity = 61/157 (38.85%), Postives = 96/157 (61.15%), Query Frame = 0
Query:    8 REIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMSHMSEARQAQLAASQGQ 165
            ++I+++ L I QL +++TQL EEL  +T  +A L+ AQ++  +C   V E+ P   G  ILVPLT SLYVPG  S+ + V++DVGTGYYV+KT P+AK Y + ++  +  N E++ + + +K+ +L  V    Q KL          +AQ AA + +
Sbjct:   10 QQINVADLDISQLAEVRTQLEEELNHLTSSFAQLKQAQAKFKNCIENVGEINPNNTGKTILVPLTNSLYVPGKLSDVEHVIVDVGTGYYVKKTRPQAKKYYEAKVDFIRGNLETLQETISKKQDNLNYVMNIIQAKLQA--------EAQTAAKKSK 158          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: KIM64596.1 (hypothetical protein SCLCIDRAFT_15177 [Scleroderma citrinum Foug A])

HSP 1 Score: 114.4 bits (285), Expect = 3.400e-22
Identity = 56/148 (37.84%), Postives = 94/148 (63.51%), Query Frame = 0
Query:    1 MASVVGEREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMS 149
            MA+    ++I+++ L I+QL +++ QL EEL  +T  +A L+ AQS+   C  +V+E+ P   GT ILVPLT SLYVPG  S+ + V+IDVGTGYY++KT   A  Y   ++  + +N E++++ + +K++++  +    Q KL   +
Sbjct:    1 MATTTQPQQINIADLDIQQLAEVRRQLEEELNHLTNSFAQLKQAQSKFKQCLESVAEVKPKNTGTTILVPLTNSLYVPGKLSDPEHVIIDVGTGYYIKKTRAEATKYYTSKVDFIRSNLETLSETIQKKQENVNYLINVMQAKLQAQA 148          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: KIO02572.1 (hypothetical protein M404DRAFT_147612 [Pisolithus tinctorius Marx 270])

HSP 1 Score: 114.0 bits (284), Expect = 4.500e-22
Identity = 55/144 (38.19%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    1 MASVVGEREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKL 145
            MAS    ++I+++ L ++QL +++ QL EEL  +T  +A L+ AQS+   C   V E+ P   GT ILVPLT SLYVPG  S+ + V++DVGTGYYV+KT   A+ Y   ++  + +N E++++ + +K++++  +    Q K+
Sbjct:    1 MASTAQPQQINIADLDLQQLAEVRRQLEEELSHLTNSFAQLKQAQSKFKQCVDNVQEVKPKNAGTTILVPLTNSLYVPGKLSDPEHVIVDVGTGYYVKKTREEAQKYYSAKVEYIRSNLETLSETIQKKQENVNYLINVMQVKI 144          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: KJA18944.1 (hypothetical protein HYPSUDRAFT_144335 [Hypholoma sublateritium FD-334 SS-4])

HSP 1 Score: 114.0 bits (284), Expect = 4.500e-22
Identity = 52/140 (37.14%), Postives = 93/140 (66.43%), Query Frame = 0
Query:    7 EREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMV 147
            ++ ++++ L I QL +++ QL +EL  +T  +A L+ AQ++  SC   V+E+ P+ +G  ILVPLT SLYVPG  S+ D V++D+GTGYYV+KT P+A  +   ++  + TN +++   + +K +++  ++G  Q+K+ V
Sbjct:    4 QQTVNVADLDIAQLTEVRKQLEDELTHLTNSFAQLKQAQAKFKSCLENVNEVRPSNKGKTILVPLTNSLYVPGKLSDPDHVIVDIGTGYYVQKTRPQAVKHYADKVEYIRTNVDTLEDTIQKKRENMNYLTGILQQKIQV 143          
BLAST of NO15G00320 vs. NCBI_GenBank
Match: XP_009830727.1 (prefoldin, alpha subunit [Aphanomyces astaci] >ETV79791.1 prefoldin, alpha subunit [Aphanomyces astaci])

HSP 1 Score: 113.6 bits (283), Expect = 5.800e-22
Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0
Query:    7 EREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNSCRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKTLPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKL 145
            + E+ L  L++EQLN LKTQ  +EL+++T  +  LR AQ+R +  +  +  L P   G  +LVPLT S+YVPG  +  + VL+DVGTGY+VEK +  AK ++D+++A +  N ES+  +L  K  +L  V    Q K+
Sbjct:    4 QNEVSLMDLTLEQLNNLKTQFEQELQQLTSSFTGLREAQTRFSDSKVALQSLQPANLGKRVLVPLTASMYVPGKLTNVETVLVDVGTGYFVEKNVEEAKGFMDRKVAFLQQNTESLKDVLENKRTNLEAVIQVMQLKM 141          
The following BLAST results are available for this feature:
BLAST of NO15G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20801.11.400e-6382.50prefoldin subunit [Nannochloropsis gaditana][more]
XP_005852487.12.600e-4670.95prefoldin subunit 5 [Nannochloropsis gaditana CCMP... [more]
OAX39842.11.200e-2239.04Prefoldin-domain-containing protein [Rhizopogon vi... [more]
OEU09628.12.000e-2235.44Prefoldin alpha subunit [Fragilariopsis cylindrus ... [more]
OJA16636.12.000e-2239.04hypothetical protein AZE42_04036 [Rhizopogon vesic... [more]
XP_007868640.12.600e-2238.85hypothetical protein GLOTRDRAFT_131403 [Gloeophyll... [more]
KIM64596.13.400e-2237.84hypothetical protein SCLCIDRAFT_15177 [Scleroderma... [more]
KIO02572.14.500e-2238.19hypothetical protein M404DRAFT_147612 [Pisolithus ... [more]
KJA18944.14.500e-2237.14hypothetical protein HYPSUDRAFT_144335 [Hypholoma ... [more]
XP_009830727.15.800e-2240.58prefoldin, alpha subunit [Aphanomyces astaci] >ETV... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR095ngnoR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00320.1NO15G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100935g1gene9610Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00320.1NO15G00320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00320 ID=NO15G00320|Name=NO15G00320|organism=Nannochloropsis oceanica|type=gene|length=2132bp
TTATTTTAATGGATGAGCTGTTGTGTCGTGTGTTGCGTGATGTAGGGTGA
GGGGATGGAGGGAGGTGGTGGTGAGGTGGAGGCTACAAGAGAGCTGTATG
TCGGAGCTGACACATGGCGCGGTGCCTAGCTACAGCGCTGAGCATGGTAT
ACTAGGTCAAGCCTCTGGGAGATGTGGTAAGAGTCTGGGGAGTTTTTTGT
GGAGCGGGGATGTCAATTACGTCGATGCGTCGCTTGCTGATGAGCTGTCG
CTGTCCAAGCCCGAAGACGGGTCCGTCACAGCCAAGTATTTCGCAAAAGC
ACACGATGAGCAGGACACGGCGGGAATTAAAAAGACGCACATAGGCACGG
GCTGGGCATGTCTATGTAGGTAATATTTCCGGTGTGGACAAGGTCGAAAC
TGTACAAGGTGTGCATATGGAGGATCCCTTGGCTTTTTGCTGGTGTCTTA
GGCATCACCTGACCAAGGCAGACACGGCAATCGTCGCTTCACGTTTCGCC
TTCATTGTTCTACATGATGATTGTCGAAATTCACTGCCTTGACATCTCAC
ATTTACTATGTATCGTTCCCCTCGTTACATGTTCGTTAAAACAAGCGCGA
TCTCACCCCGACAGATTTATTTTCCCTGCCTTGCTGGCTGCAGCGCTTAT
CCCACACTCCCCTCCCCTCCCTCCCACAGCCTTATCCCCCCCAAAAAAAT
TATATAAGCATGGCTTCGGTGGTGGGCGAGCGAGAAATCGACCTCAGCAA
GCTTTCCATTGAACAGCTCAATCAGCTCAAGACCCAGCTGAGCGAGgtaa
gggaagaaggcggacgggagggagggagaattgaggccctgtgtcagcta
ttactcctcaacgacaaggttgtggacgtttgtgtcgatgctttgtattc
agttgcctacatttatgcgctcccttccaggctttatattccgtgacccc
catctatgtggcaacctcccctcaacccgccctccctccctccattcctc
cctttctccctccctccttcccttcctcaaaaaagGAGCTGGAGGAAATC
ACCCAGCACTACGCCTCCCTTCGTAATGCCCAGTCTCGTCTCAACAGCTG
TCGAACAACTGTATCCGAGCTGGCACCGACCCCAGAAGgtaagatggagg
agatgctacagtgaggaggaagggagtgggggagggagggggagggcagg
cgagatgctgctcaagtgatgatgcattcttaccatttctcctcgtctcc
acaccacaatcccctctcccttccttctttcctccctccttccctcccct
ccattagGCACAGAGATTCTGGTCCCTCTGACGCAGTCCCTTTACGTCCC
CGGGAACACCAGCGAGGCGGACAAGgtgggagggcgggacagagggcggg
acagagggtgggacggagggagatgctgttgaaggcctgtgtgtggatta
tataacgaacatggcgagaagggaaaggaaccgagggaagaagggaggga
agaaaggaaggaaagaggaagggaccggttcaagacgtaagacacgtcga
agggaaagaggggaagagcgacggatacgtggaaggctcgaaaaccatac
ctccctcaccccttgccctccctccctccctccctccctccctcagGTCC
TGATCGACGTGGGCACGGGGTATTATGTCGAGAAGACGCTGCCTAGGGCC
AAGGACTACATAGACAAACGAATCGCAGTCGTCAACACCAACGCCGAGAG
CGTGGCGCAGgtgagtggccgctcttatttctccttctttccctccctcc
ccccctccccccctcccttcctccttccctctctccctacctccctttat
tcctgtcatcctcctccctcatctattctcacttctcatccctccctccc
tccctccctccctccctccctcctcccctccctttcctcagTTGCTGATG
CAGAAGGAGCAATCCCTTCGGATGGTCTCCGGGTATTTTCAGAAGAAACT
TATGGTCATGAGCCACATGTCAGAAGCTAGGCAAGCGCAGCTTGCGGCCT
CACAAGGACAGAAATAAATAAATAGGAAGGGAAGAAATAAAGGAAGGGAT
GCGTAAAGAACGAAGATATTACGAAAGTCATG
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protein sequence of NO15G00320.1

>NO15G00320.1-protein ID=NO15G00320.1-protein|Name=NO15G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=166bp
MASVVGEREIDLSKLSIEQLNQLKTQLSEELEEITQHYASLRNAQSRLNS
CRTTVSELAPTPEGTEILVPLTQSLYVPGNTSEADKVLIDVGTGYYVEKT
LPRAKDYIDKRIAVVNTNAESVAQLLMQKEQSLRMVSGYFQKKLMVMSHM
SEARQAQLAASQGQK*
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Synonyms
Publications