NO15G00140, NO15G00140 (gene) Nannochloropsis oceanica

Overview
NameNO15G00140
Unique NameNO15G00140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1248
Alignment locationchr15:33552..34799 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:33552..34799 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL149nonsL149Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR095ngnoR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00140.1NO15G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586967gene_4567Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00140.1NO15G00140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00140 ID=NO15G00140|Name=NO15G00140|organism=Nannochloropsis oceanica|type=gene|length=1248bp
CCCTCCCTCCCTCCCTCCCTCGTCCTCTCTCCCCCCCTCCCTCCTCCATC
GCTTTCTAAACGAATGCTACGTGCCCAAGTACCTCTTCTGGCACTTTTAT
GCGTGGTCCTTCCTATGGACGAGCATCCTCTTGCTCTATACAGTCTTCCC
TCCCTTCCTTCCTCCTTCCTTCCCGCCGTCTCCCTTGGTTTCCTCCGCCT
CCTTCTCGAGCAACTCACGCCTGGCCCTGGTCCTTTTTCTGTTTCAAGCT
TTAAGGCGATTGTACGAGTCCTTGCTCGTATTTTCCTACGGAGAGGCAAG
GATGCACATGGCAGgtacggaaccaagagaggagggagggggcagggaga
ggacgaggaagaaaggaacgcatgaagagagagtcagacggaggcctatc
acttcacgcaatcacccttccctttctctcaccctcgccccctgcctctt
ttttcaccctctgccagCCTACCTGGTCGGCCTTGTGCATTACACGCTCG
CCGGCCTCTCCCTTGTCTTTGACCCTGCCTGCGCCTCGACCTCCCTCCCT
CCCTCCCCCACTTCCTACTCCGCCTTTCCCTCTTTCATCTCTACCTGGCG
CGTTATGCTCCCCCTCCTCCTCTTCTTCTTTGCTTCTCACCAGCAAGCCG
GCGTACACTTCGCTCTTGCCTCCCTCCGACCACCACGAGGAATGCAAGCC
CCTCTATCCGGCCCTCCTTCCCGCCCTCCCCCCCGCCCTCCCTCCCACGT
TGTCCCCTCCTCATTTCACCACTGGTCGTTTTCCTGGTGGATCTGCCCAC
ACTACTTCTTCGAGTCCCTCATCTACCTCTCGCTTCTCCTCCTGTGCAGC
AGCAGCAGCACCACCGCAACCACCAGGAAGCTGGATGGGAGGGAGGGTGG
GATGAATACCAGTGTGTTGTGGATGTGGGTGTGGGTGACGGCGAATCTGA
CCGTATCGGCGGCCAAGAGCCAAAGGTGGTACTTCCAAAACTTTCCAAAG
GCGGCTAGAAAGATGAGGAGGAGGGCGTTGCTGCTGCCTGGGATGTTGTG
AAGGGGGATGGGAGAGGGAGAGAGATAGGGAAGGAAGTAAGGAAGGAGGA
CTGTGAATAAATAGGTTTGTAGATACAAAGAAACAATCCGGGCAGTGTAA
GAAGAAAATAAGTGGATCAAGTACACACGTTGTGTCCCTCGCTTTCCGAC
CCGAGCATCTCCTCCTTTCTTCCTCCCTCCCCCCTTCCTCCTCCCTCC
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protein sequence of NO15G00140.1

>NO15G00140.1-protein ID=NO15G00140.1-protein|Name=NO15G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=199bp
MHMAAYLVGLVHYTLAGLSLVFDPACASTSLPPSPTSYSAFPSFISTWRV
MLPLLLFFFASHQQAGVHFALASLRPPRGMQAPLSGPPSRPPPRPPSHVV
PSSFHHWSFSWWICPHYFFESLIYLSLLLLCSSSSTTATTRKLDGREGGM
NTSVLWMWVWVTANLTVSAAKSQRWYFQNFPKAARKMRRRALLLPGML*
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Synonyms
Publications