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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:873581..875835 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02970.1 vs.
Match: EWM24510.1 (hypothetical protein Naga_100560g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 297.4 bits (760), Expect = 1.100e-76 Identity = 187/332 (56.33%), Postives = 235/332 (70.78%), Query Frame = 0
Query: 13 SSSSPPPSSSSPETTPEQWERMKAFLRSLPPADSLSRTPQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRCFTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVEGG-GEEREEKRQALIRRLVQGGGREGGEGEGGERGGGGGGGGGAVAGAVSSSVANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSTSSFSSLYASNTTLLLSLLHQYASTDPKIVKDSTLRLRYADIIAQALSISDTTPSLHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLD 344
++SS +S SPETTPEQW+R+KAFLR+LPP+DSLSRT QS ERE++LV+ FLSQHVSL+QLFL+LDQATR D++RL VAR ++RCFTS LG+DLLTDPLVLP+L++GM+H EEEVR+LTTKIL +NLQ+ E GG GEEREEKRQALIRRL G G + + + SVA AL QG+AD SIAV Q SADALL+MMR T +F S ++ LL+ +H++AS +P ++++ LRLRYAD+IA+A +++D PSLHA L S STGPA LLF+L G GGT D LIRFSALELL+
Sbjct: 2 AASSADSASPSPETTPEQWDRIKAFLRALPPSDSLSRTAQSRERERELVATFLSQHVSLIQLFLALDQATRRADKDRLHQVARAVNRCFTSALGMDLLTDPLVLPHLVLGMRHPEEEVRRLTTKILSENLQLREGEGGGGEGEEREEKRQALIRRLSVGTG-DAEDVVSSLSDPALDPPSASPTSNFPMSVAAALAQGIADPSIAVAQSSADALLSMMR---------------TCAFPSAPTAHIAPLLAHIHRFASVNPDVLRNQVLRLRYADVIARAFALADVQPSLHASLASPSTGPALALLFDLARGASEGGTADELIRFSALELLE 317
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02970.1 ID=NO14G02970.1|Name=NO14G02970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp
ATGGCCGCCTCCTCGTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCTCCCC
TCCTCCCTCCTCCTCCTCCCCCGAAACTACCCCCGAGCAATGGGAACGGA
TGAAAGCTTTCCTCCGCTCTCTTCCTCCCGCCGACTCTCTATCTCGGACT
CCCCAGAGCCTAGAGCGCGAAAAAGACCTTGTCAGCGCTTTCCTCTCCCA
GCACGTCTCCCTGGTCCAACTCTTCCTCTCTCTCGATCAGGCCACCCGGA
GTGGGGACGAGGAGAGACTACGTCACGTGGCGCGTGTGATTCATCGATGT
TTCACGTCCCCTCTTGGCCTGGATCTGCTGACTGATCCTCTCGTCTTACC
GAACCTGATTGTAGGGATGAAGCACCAGGAGGAAGAAGTTCGGAAGCTGA
CGACGAAGATTCTGAAGCAGAATTTGCAAGTGGGGGAGAAGCGGGTGGAG
GGAGGTGGGGAAGAGAGGGAGGAGAAGAGGCAGGCGTTGATACGGCGGTT
GGTGCAGGGAGGAGGGAGAGAGGGAGGGGAAGGAGAAGGAGGGGAAAGAG
GAGGAGGAGGGGGAGGAGGAGGAGGAGCGGTGGCTGGTGCCGTTTCGTCC
TCTGTTGCCAATGCTTTGATCCAGGGTGTGGCCGACTCTAGCATTGCCGT
CGGTCAATTTTCTGCAGATGCGCTATTGGCAATGATGCGCTTCCCTGTCT
CCCTCCCTCCATTCCTCCCTGCCTCTTCCTCCTCCACCTCGTCCTTCTCC
TCTCTATATGCCAGCAACACGACCCTCCTCCTCTCCCTTCTTCATCAGTA
CGCAAGCACCGATCCAAAGATTGTAAAGGACAGCACCTTGCGCTTACGGT
ATGCAGACATTATTGCCCAAGCCCTCTCTATATCAGACACCACGCCCTCC
CTCCATGCTTTCCTCACCTCCTCCTCCACCGGCCCCGCCGCCGGCCTGCT
CTTCAACCTCGTGGAGGGAGACAAAACGGGAGGTACCGAAGATGTGTTGA
TTAGGTTCAGTGCATTAGAGCTCTTGGATGGGTGGATTGTACCACACACT
GTTGCGAGACGATGGCATGAGTGGGAGGGAGGGAGGGGGGGAGGGAGGGG
GGGGGACGAGGAGATCATGCTGTTGCTCATGAGCACGGTGTTGCGGTATT
CGGAGTCGAGGAGGGAGGGTGACAGGCTGGCGGCGCTGCAGGTGCTGTGT
TGCTTTGCTCGCGCATCGAGGGAAGGGTTGAGGAGGGTGCTGGAAGATCC
GGTGTTGCTTGAAAGCTGGTTGGACATGAGGGGGGGAAGTGTGGAGATGA
AAACGGCGCAGATGCACAGTCTGGCAAAGGCTCTGGAGGGAGGGAGGGAG
GGAGGAAGGGAGGGAGGGGGCCACGCACCGCCGGAGCAGACGGGGAGGGT
CCAGGCGACTGAACGACAGCCAGAAGTGGTGGGTGTGGAGATGGAGGAGG
GAGGGAGGGAGGGAGGACGAGGGAGGGTAGTGTCACAAGAGGTGCGAGCC
CTGTCAGATTTGCGGAAGCTCCTGTTTTCGCGATTGGGGGAACTGAACGG
GAGTCCGTCGACAATGAGGTTTGTGCTGCAACAGCTGCAGGCCCTGCCTA
TTCCGAGCCTGAGACATGCGTTGTATCATCTGCTGGTGGCGGTGGTGGGA
CAGGAGGGAGGATGGGGGGTGCGGGCGTTGTTTTCAACGGCCGGGTTTCG
GGAGTTTCTGATGAGCCGGACGACGGAGATGGACAAGATAGGGAAGGAAT
GGAAATACTCGTTGGTGGAGGCAATTGAGCTGGAGACGCGTGGGGAGGGG
GGGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGCTGTAGGGATGTT
GGGGGACGAGGTGATAGAGGAGCTAAGAGAATTTTTGAAGCTCGGACCTT
TTTATGCGGGGAGGCAGGCCGAGGTGGAGACGACGATGTAGGGAGGGAGG
GAAAGTGGAAGGCAAAGAGGGAGAGGTTTGAGGAGAAAGATTCACAAGAC
ACGCAAGTGTTGGTTGCCTAGGGTCATGCACAAAAGCAAAAAAAGTGAAA
CGAAAGACAAGGTTTTTGTGAAATAATGGGAAGAATCATGAAAAAAAAGA
CGACAGAGT back to topprotein sequence of NO14G02970.1 >NO14G02970.1-protein ID=NO14G02970.1-protein|Name=NO14G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MAASSSSSSSSSSSSSPPPSSSSPETTPEQWERMKAFLRSLPPADSLSRT
PQSLEREKDLVSAFLSQHVSLVQLFLSLDQATRSGDEERLRHVARVIHRC
FTSPLGLDLLTDPLVLPNLIVGMKHQEEEVRKLTTKILKQNLQVGEKRVE
GGGEEREEKRQALIRRLVQGGGREGGEGEGGERGGGGGGGGGAVAGAVSS
SVANALIQGVADSSIAVGQFSADALLAMMRFPVSLPPFLPASSSSTSSFS
SLYASNTTLLLSLLHQYASTDPKIVKDSTLRLRYADIIAQALSISDTTPS
LHAFLTSSSTGPAAGLLFNLVEGDKTGGTEDVLIRFSALELLDGWIVPHT
VARRWHEWEGGRGGGRGGDEEIMLLLMSTVLRYSESRREGDRLAALQVLC
CFARASREGLRRVLEDPVLLESWLDMRGGSVEMKTAQMHSLAKALEGGRE
GGREGGGHAPPEQTGRVQATERQPEVVGVEMEEGGREGGRGRVVSQEVRA
LSDLRKLLFSRLGELNGSPSTMRFVLQQLQALPIPSLRHALYHLLVAVVG
QEGGWGVRALFSTAGFREFLMSRTTEMDKIGKEWKYSLVEAIELETRGEG
GEGREGGREGGVAVGMLGDEVIEELREFLKLGPFYAGRQAEVETTM* back to topmRNA from alignment at chr14:873581..875835- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02970.1 ID=NO14G02970.1|Name=NO14G02970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2255bp|location=Sequence derived from alignment at chr14:873581..875835- (Nannochloropsis oceanica)
ATGGCCGCCTCCTCGTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCTCCCC
TCCTCCCTCCTCCTCCTCCCCCGAAACTACCCCCGAGCAATGGGAACGGA
TGAAAGCTTTCCTCCGCTCTCTTCCTCCCGCCGACTCTCTATCTCGGACT
CCCCAGAGCCTAGAGCGCGAAAAAGACCTTGTCAGCGCTTTCCTCTCCCA
GCACGTCTCCCTGGTCCAACTCTTCCTCTCTCTCGATCAGGCCACCCGGA
GTGGGGACGAGGAGAGACTACGTCACGTGGCGCGTGTGATTCATCGATGT
TTCACGTCCCCTCTTGGCCTGGATCTGCTGACTGATCCTCTCGTCTTACC
GAACCTGATTGTAGGGATGAAGCACCAGGAGGAAGAAGTTCGGAAGCTGA
CGACGAAGATTCTGAAGCAGAATTTGCAAGTGGGGGAGAAGCGGGTGGAG
GGAGGTGGGGAAGAGAGGGAGGAGAAGAGGCAGGCGTTGATACGGCGGTT
GGTGCAGGGAGGAGGGAGAGAGGGAGGGGAAGGAGAAGGAGGGGAAAGAG
GAGGAGGAGGGGGAGGAGGAGGAGGAGCGGTGGCTGGTGCCGTTTCGTCC
TCTGTTGCCAATGCTTTGATCCAGGGTGTGGCCGACTCTAGCATTGCCGT
CGGTCAATTTTCTGCAGATGCGCTATTGGCAATGATGCGCTTCCCTGTCT
CCCTCCCTCCATTCCTCCCTGCCTCTTCCTCCTCCACCTCGTCCTTCTCC
TCTCTATATGCCAGCAACACGACCCTCCTCCTCTCCCTTCTTCATCAGTA
CGCAAGCACCGATCCAAAGATTGTAAAGGACAGCACCTTGCGCTTACGGT
ATGCAGACATTATTGCCCAAGCCCTCTCTATATCAGACACCACGCCCTCC
CTCCATGCTTTCCTCACCTCCTCCTCCACCGGCCCCGCCGCCGGCCTGCT
CTTCAACCTCGTGGAGGGAGACAAAACGGGAGGTACCGAAGATGTGTTGA
TTAGGTTCAGTGCATTAGAGCTCTTGGATGGGTGCGTGGGTACGAGAAAC
ACCGCCGCGTATGTGCTAGAACGAGGGACGGTCAGAACCCTGGTGGCCCT
CGCGACAGGGAGTGAGGGAGGGAGGGAGGGAGGAGAACCCCACCCGATTT
TGGGGGGGACGGCATTGAGGGTTTTAGGTGGATTGTACCACACACTGTTG
CGAGACGATGGCATGAGTGGGAGGGAGGGAGGGGGGGAGGGAGGGGGGGG
GACGAGGAGATCATGCTGTTGCTCATGAGCACGGTGTTGCGGTATTCGGA
GTCGAGGAGGGAGGGTGACAGGCTGGCGGCGCTGCAGGTGCTGTGTTGCT
TTGCTCGCGCATCGAGGGAAGGGTTGAGGAGGGTGCTGGAAGATCCGGTG
TTGCTTGAAAGCTGGTTGGACATGAGGGGGGGAAGTGTGGAGATGAAAAC
GGCGCAGATGCACAGTCTGGCAAAGGCTCTGGAGGGAGGGAGGGAGGGAG
GAAGGGAGGGAGGGGGCCACGCACCGCCGGAGCAGACGGGGAGGGTCCAG
GCGACTGAACGACAGCCAGAAGTGGTGGGTGTGGAGATGGAGGAGGGAGG
GAGGGAGGGAGGACGAGGGAGGGTAGTGTCACAAGAGGTGCGAGCCCTGT
CAGATTTGCGGAAGCTCCTGTTTTCGCGATTGGGGGAACTGAACGGGAGT
CCGTCGACAATGAGGTTTGTGCTGCAACAGCTGCAGGCCCTGCCTATTCC
GAGCCTGAGACATGCGTTGTATCATCTGCTGGTGGCGGTGGTGGGACAGG
AGGGAGGATGGGGGGTGCGGGCGTTGTTTTCAACGGCCGGGTTTCGGGAG
TTTCTGATGAGCCGGACGACGGAGATGGACAAGATAGGGAAGGAATGGAA
ATACTCGTTGGTGGAGGCAATTGAGCTGGAGACGCGTGGGGAGGGGGGGG
AAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGCTGTAGGGATGTTGGGG
GACGAGGTGATAGAGGAGCTAAGAGAATTTTTGAAGCTCGGACCTTTTTA
TGCGGGGAGGCAGGCCGAGGTGGAGACGACGATGTAGGGAGGGAGGGAAA
GTGGAAGGCAAAGAGGGAGAGGTTTGAGGAGAAAGATTCACAAGACACGC
AAGTGTTGGTTGCCTAGGGTCATGCACAAAAGCAAAAAAAGTGAAACGAA
AGACAAGGTTTTTGTGAAATAATGGGAAGAATCATGAAAAAAAAGACGAC
AGAGT back to topCoding sequence (CDS) from alignment at chr14:873581..875835- >NO14G02970.1 ID=NO14G02970.1|Name=NO14G02970.1|organism=Nannochloropsis oceanica|type=CDS|length=1941bp|location=Sequence derived from alignment at chr14:873581..875835- (Nannochloropsis oceanica)
ATGGCCGCCTCCTCGTCTTCTTCCTCTTCTTCCTCTTCTTCCTCCTCCCC
TCCTCCCTCCTCCTCCTCCCCCGAAACTACCCCCGAGCAATGGGAACGGA
TGAAAGCTTTCCTCCGCTCTCTTCCTCCCGCCGACTCTCTATCTCGGACT
CCCCAGAGCCTAGAGCGCGAAAAAGACCTTGTCAGCGCTTTCCTCTCCCA
GCACGTCTCCCTGGTCCAACTCTTCCTCTCTCTCGATCAGGCCACCCGGA
GTGGGGACGAGGAGAGACTACGTCACGTGGCGCGTGTGATTCATCGATGT
TTCACGTCCCCTCTTGGCCTGGATCTGCTGACTGATCCTCTCGTCTTACC
GAACCTGATTGTAGGGATGAAGCACCAGGAGGAAGAAGTTCGGAAGCTGA
CGACGAAGATTCTGAAGCAGAATTTGCAAGTGGGGGAGAAGCGGGTGGAG
GGAGGTGGGGAAGAGAGGGAGGAGAAGAGGCAGGCGTTGATACGGCGGTT
GGTGCAGGGAGGAGGGAGAGAGGGAGGGGAAGGAGAAGGAGGGGAAAGAG
GAGGAGGAGGGGGAGGAGGAGGAGGAGCGGTGGCTGGTGCCGTTTCGTCC
TCTGTTGCCAATGCTTTGATCCAGGGTGTGGCCGACTCTAGCATTGCCGT
CGGTCAATTTTCTGCAGATGCGCTATTGGCAATGATGCGCTTCCCTGTCT
CCCTCCCTCCATTCCTCCCTGCCTCTTCCTCCTCCACCTCGTCCTTCTCC
TCTCTATATGCCAGCAACACGACCCTCCTCCTCTCCCTTCTTCATCAGTA
CGCAAGCACCGATCCAAAGATTGTAAAGGACAGCACCTTGCGCTTACGGT
ATGCAGACATTATTGCCCAAGCCCTCTCTATATCAGACACCACGCCCTCC
CTCCATGCTTTCCTCACCTCCTCCTCCACCGGCCCCGCCGCCGGCCTGCT
CTTCAACCTCGTGGAGGGAGACAAAACGGGAGGTACCGAAGATGTGTTGA
TTAGGTTCAGTGCATTAGAGCTCTTGGATGGGTGGATTGTACCACACACT
GTTGCGAGACGATGGCATGAGTGGGAGGGAGGGAGGGGGGGAGGGAGGGG
GGGGGACGAGGAGATCATGCTGTTGCTCATGAGCACGGTGTTGCGGTATT
CGGAGTCGAGGAGGGAGGGTGACAGGCTGGCGGCGCTGCAGGTGCTGTGT
TGCTTTGCTCGCGCATCGAGGGAAGGGTTGAGGAGGGTGCTGGAAGATCC
GGTGTTGCTTGAAAGCTGGTTGGACATGAGGGGGGGAAGTGTGGAGATGA
AAACGGCGCAGATGCACAGTCTGGCAAAGGCTCTGGAGGGAGGGAGGGAG
GGAGGAAGGGAGGGAGGGGGCCACGCACCGCCGGAGCAGACGGGGAGGGT
CCAGGCGACTGAACGACAGCCAGAAGTGGTGGGTGTGGAGATGGAGGAGG
GAGGGAGGGAGGGAGGACGAGGGAGGGTAGTGTCACAAGAGGTGCGAGCC
CTGTCAGATTTGCGGAAGCTCCTGTTTTCGCGATTGGGGGAACTGAACGG
GAGTCCGTCGACAATGAGGTTTGTGCTGCAACAGCTGCAGGCCCTGCCTA
TTCCGAGCCTGAGACATGCGTTGTATCATCTGCTGGTGGCGGTGGTGGGA
CAGGAGGGAGGATGGGGGGTGCGGGCGTTGTTTTCAACGGCCGGGTTTCG
GGAGTTTCTGATGAGCCGGACGACGGAGATGGACAAGATAGGGAAGGAAT
GGAAATACTCGTTGGTGGAGGCAATTGAGCTGGAGACGCGTGGGGAGGGG
GGGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGCTGTAGGGATGTT
GGGGGACGAGGTGATAGAGGAGCTAAGAGAATTTTTGAAGCTCGGACCTT
TTTATGCGGGGAGGCAGGCCGAGGTGGAGACGACGATGTAG back to top
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