NO14G01280, NO14G01280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01280 vs. NCBI_GenBank
Match: XP_005853682.1 (snare associated golgi protein, partial [Nannochloropsis gaditana CCMP526] >EKU22676.1 snare associated golgi protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 380.6 bits (976), Expect = 7.300e-102 Identity = 242/457 (52.95%), Postives = 276/457 (60.39%), Query Frame = 0 Query: 1 MLSPGLHHFPMDYARLEPDGTGGSGNAHEDNSHDHPQQHSGDREEYEDEVEILFDSPSSRATPMDDQGRASPFLPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPLGIPSWLSSSTSQSRCQSGVS----------------PFASLRRMRTSSSQEHAQAQQVTPSSLSSSLSSTSTPQALHPAASASNVLVNPRFHSHAPLWVQVTYFCVLGSLFLATVIDSFTSKRVYRLLEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRA-WKYVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQSGEG 441 +L G H P DYARLE TG A D +H + G EE EDEVEILF SP ATP DDQGRAS FL SS LRPLG LSSS S S C+ G + P LRRM S V+PRFHSHAP WVQVTYF +LG LFLA ++DSFTS+ +Y LLEHLFAW+E H ILGP+VFWSAVVVFS++C+PESALT+GGGYIFA+AHGV GI+LCT L++ GGVVG V++FL+ARYLAFDTVQ W RR+RLLRALDLSLVENGAKMVFLLRLSPFLP PPLSYLLGTTSVKLSDF+LGS GMLPW+VTCSYLGSAL+GV D+ G RG++ W G+YTRRAMEE+LRE+ EG Sbjct: 9 VLPAGSQHSPSDYARLE---TGHGCGA--DRNHRVLEARGGADEE-EDEVEILFASP---ATPTDDQGRASAFLVSS---------------SSPSSSPPAPHATALPSVRNLLRPLGAIFSLSSS-SASGCRHGGARGAGGSLHLPPSRGSPPSRFLRRM----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAFVSPRFHSHAPPWVQVTYFLLLGCLFLAALVDSFTSRHLYHLLEHLFAWVEEHQILGPLVFWSAVVVFSVVCVPESALTVGGGYIFAKAHGVGWGILLCTFLMMAGGVVGSVIAFLVARYLAFDTVQRWARRHRLLRALDLSLVENGAKMVFLLRLSPFLPAPPLSYLLGTTSVKLSDFVLGSTGMLPWIVTCSYLGSALRGVADVAGKGRRGQSKWXXXXXXXXXXXXXXXXXXXGIYTRRAMEEILREEPSEG 436
BLAST of NO14G01280 vs. NCBI_GenBank
Match: EWM24678.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 380.2 bits (975), Expect = 9.600e-102 Identity = 241/460 (52.39%), Postives = 278/460 (60.43%), Query Frame = 0 Query: 1 MLSPGLHHFPMDYARLEPDGTGGSGNAHEDNSHDHPQQHSGDREEYEDEVEILFDSPSSRATPMDDQGRASPFLPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPLGIPSWLSSSTSQSRCQSGVSPFASLRRMRTSSSQEHAQAQQVTPSS-------------------LSSSLSSTSTPQALHPAASASNVLVNPRFHSHAPLWVQVTYFCVLGSLFLATVIDSFTSKRVYRLLEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRA-WKYVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQSGEG 441 +L G H P DYARLE TG A D +H + G EE EDEVEILF SP ATP DDQGRAS FL SS LRPLG LSSS S S C+ G + R + H + +P S S V+PRFHSHAP WVQVTYF +LG LFLA ++DSFTS+ +Y LLEHLFAW+E H ILGP+VFWSAVVVFS++C+PESALT+GGGYIFA+AHGV GI+LCT L++ GGVVG V++FL+ARYLAFDTVQ W RR+RLLRALDLSLVENGAKMVFLLRLSPFLP PPLSYLLGTTSVKLSDF+LGS GMLPW+VTCSYLGSAL+GV D+ G RG++ W G+YTRRAMEE+LRE+ EG Sbjct: 28 VLPAGSQHSPSDYARLE---TGHGCGA--DRNHRVLEARGGADEE-EDEVEILFASP---ATPTDDQGRASTFLVSS---------------SSPSSSPPAPHATALPSVRTLLRPLGAIFSLSSS-SASGCRHGGA--------RGAGGSLHLPPSRGSPPSRFLRRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAFVSPRFHSHAPPWVQVTYFLLLGCLFLAALVDSFTSRHLYHLLEHLFAWVEEHQILGPLVFWSAVVVFSVVCVPESALTVGGGYIFAKAHGVGWGILLCTFLMMAGGVVGSVIAFLVARYLAFDTVQRWARRHRLLRALDLSLVENGAKMVFLLRLSPFLPAPPLSYLLGTTSVKLSDFVLGSTGMLPWIVTCSYLGSALRGVADVAGKGRRGQSKWXXXXXXXXXXXXXXXXXXXGIYTRRAMEEILREEPSEG 454
BLAST of NO14G01280 vs. NCBI_GenBank
Match: EWM23566.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 133.3 bits (334), Expect = 2.000e-27 Identity = 87/220 (39.55%), Postives = 123/220 (55.91%), Query Frame = 0 Query: 223 KRVYRLLEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSL-VENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGV-NDLGGGRGRGRAWKYVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQSGEG 441 + V R+L W+ RH + G + F + + + +P +ALT+GGG++F QA GV G V + + G G V +F + R+L +T Q RY +LRALD SL G K+V LLRLSP +P L+Y++ TSV L + LG GM+P VV S+LG+ G+ + GG R K Y +GAVA +VA +GV +R A EE LR+ EG Sbjct: 75 RHVARVLSTFLEWVGRHPLRGAMAFAAVYALSVVFFVPGAALTLGGGFLFGQALGVGPGTVFASLAVFVGASAGAVAAFSLGRWLLHETAQSTLNRYTILRALDASLHGHRGLKIVLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREAGGESSVERGVKIAMYVVGAVA---LVAAVGVLSRFAREE-LRKIQDEG 290
BLAST of NO14G01280 vs. NCBI_GenBank
Match: GAX13037.1 (hypothetical protein FisN_2Hh518 [Fistulifera solaris]) HSP 1 Score: 115.2 bits (287), Expect = 5.700e-22 Identity = 83/266 (31.20%), Postives = 139/266 (52.26%), Query Frame = 0 Query: 207 VLGSLFLATVIDSFTSKRVYRLLEHLFA-----WIERHMILGPVVFWSAVVVFSILCIP-ESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRAWK------YVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQSGEGRREDEGRGEE--METVVVSR 459 VL SLF+ + D+ R L+ FA W++ H + G V F+ + +L IP + LT+G GYI+ A+G +G+ L T + L G +G V+ FL+ RYL + V+ W R+Y L A+D++ E+G +++ +L L+P LP P++Y+ GTTS+ L F+L LP ++ +++G++ + G + R + GL V GI I + +E + + GE ++DE R EE +ET + +R Sbjct: 69 VLTSLFVIILWDAVMRDPEDRFLQPDFAERFLQWVQDHPLKGIVAFFVVIATAVVLMIPIGTPLTVGCGYIYKGAYGWKLGLTLATFVALGGSALGAVICFLLGRYLMREQVRKWVRKYPLFDAIDMAAAEHGLRIMAMLYLTPILPLGPVAYMCGTTSMALHHFVLAKVASLPLMLLYAFIGASTGALLSHGKSQEEFRKIEENQTLILSGIGLSFVMIAGITRNIKKELNKILERQKKHKPGEIEQQDEPRDEETPIETGMTAR 334
BLAST of NO14G01280 vs. NCBI_GenBank
Match: GAX10988.1 (hypothetical protein FisN_2Lh518 [Fistulifera solaris]) HSP 1 Score: 112.5 bits (280), Expect = 3.700e-21 Identity = 79/256 (30.86%), Postives = 131/256 (51.17%), Query Frame = 0 Query: 207 VLGSLFLATVIDSFTSKRVYRLL-----EHLFAWIERHMILGPVVFWSAVVVFSILCIP-ESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRAWK------YVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQSGEGRREDEGRGEE 451 VL SLF+ + D+ R L E W++ H + G V F+ + +L IP + LT+G GYI+ A+G +G+ L T + L G +G V+ FL+ RYL + V+ W R+Y L A+D++ E+G +++ +L L+P LP P++Y+ GTTS+ L F+L LP ++ +++G++ + G + R + GL V GI I + +E + + GE ++DE R EE Sbjct: 69 VLTSLFVIILWDAVMRDPEDRFLRPDFAERFLQWVQDHPLKGIVAFFLVIATAVVLMIPIGTPLTVGCGYIYKGAYGWKLGLTLATFVALGGSALGAVICFLLGRYLMREQVRKWVRKYPLFDAIDMAAAEHGLRIMAMLYLTPILPLGPVAYMCGTTSMALHHFVLAKVASLPLMLLYAFIGASTGALLSHGKSQEEFRKIEENQTLILSGIGLSFVMIAGITRNIKKELNKILERQKKHKPGEIEQQDEPRDEE 324
BLAST of NO14G01280 vs. NCBI_GenBank
Match: EJK65235.1 (hypothetical protein THAOC_13931 [Thalassiosira oceanica]) HSP 1 Score: 111.7 bits (278), Expect = 6.300e-21 Identity = 73/248 (29.44%), Postives = 131/248 (52.82%), Query Frame = 0 Query: 216 VIDSFTSKRVYRLLEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTV-QGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRAWKYVWYGLGAVAT--IGIVAG------IGVYTRRAMEEVLREQSGEGRREDEGRGEEMETV 455 ++DS T R + WIE ++I G F V ++L +P S LT+GGG++F +A G+ G+ L ++ + G +G + SFL+ RYL D V + ++Y+++ AL +L E G ++ LLRLSP +P ++Y+LG TS++L +I G+LP V ++G+ + + G G AVA+ +GIV G +G Y ++ ++++ +Q+ ++ +G+ + V Sbjct: 48 IVDSATDNRAGATVSAFLEWIESNVIAGVFAFMGVYFVATVLFVPGSVLTLGGGFVFGKALGLGRGVALASSAVFIGASLGAIASFLLGRYLLRDWVTERLFKKYKIMTALGSALEEKGFQIAILLRLSPIIPFNAINYILGATSMRLVHYIFSLLGILPGTVLYCFIGATAGSLTESGSAVS----------GPVAVASLIVGIVFGLASLFLVGYYAKKEFDKIVPQQAQSQGTSEQVQGDTDDMV 285
BLAST of NO14G01280 vs. NCBI_GenBank
Match: XP_002185108.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43240.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 110.2 bits (274), Expect = 1.800e-20 Identity = 64/189 (33.86%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 201 QVTYFCVLGSLFLA----TVIDSFTSKRVYRLLEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSA 386 + T V+G L L ++DS T++ V ++ WIE + + G +F +IL IP S LT+G G++FA + G+ +G+V+ + G +G SF I RYL D ++Y + ALD++L ENG K++ LLRLSP +P ++Y+ G T+V + D+IL +LP +LG++ Sbjct: 19 RTTIKLVIGLLLLGFVAFVILDSLTNRYVRDGIDSFLDWIEENSVEGIFLFVLVYFAATILFIPGSILTLGAGFVFASSFGLGLGLVIGVFAVFLGASLGATASFFIGRYLLRDQATKLTKKYAVFEALDVALQENGLKILVLLRLSPIVPFNAINYICGVTAVSIRDYILALFAILPGTTLYVFLGAS 207
BLAST of NO14G01280 vs. NCBI_GenBank
Match: XP_002186013.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65483.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 106.7 bits (265), Expect = 2.000e-19 Identity = 55/157 (35.03%), Postives = 94/157 (59.87%), Query Frame = 0 Query: 230 EHLFAWIERHMILGPVVFWSAVVVFSILCIP-ESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSA 386 E W++ H I G + F + V + +P + LT+G GY++ A+G +G+ + T + + G +G VV FL+ RYL D V+ W R+Y L A+D + E+G +++ +L L+P LP P+SY+ GTTS+ LS F+L LP ++ +++G++ Sbjct: 134 ETFLLWVQDHPIRGLLAFLVVIAVAVVFMVPIGTPLTLGCGYVYKGAYGWRLGLTIATAVSMAGSALGAVVCFLLGRYLMRDQVRTWIRKYPLFDAIDAAAAEHGLRIMAMLYLTPILPLGPVSYMCGTTSMALSSFVLAKIASLPLMLLYAFIGAS 290
BLAST of NO14G01280 vs. NCBI_GenBank
Match: WP_106921108.1 (TVP38/TMEM64 family protein [filamentous cyanobacterium CCP3] >PSR18012.1 TVP38/TMEM64 family protein [filamentous cyanobacterium CCP3]) HSP 1 Score: 106.3 bits (264), Expect = 2.700e-19 Identity = 69/210 (32.86%), Postives = 110/210 (52.38%), Query Frame = 0 Query: 229 LEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRAWKYVWY--GLGAVATIGIVAGIGVYTRRAMEEVLREQ 437 L AWI+ + P+ F +V ++ +P S +T+G G +F G+V + L+ G ++G +FL+ RY+A D V G +A+D ++ ++G K++FLLRLSP P L+Y LG + + L D+++GS G+LP V YLGS + + LG G + W +G VAT+ + I RRA+ E L E+ Sbjct: 39 LVQALAWIDGLGAIAPLAFILLYIVITVAFVPASVVTLGAGVVF--------GVVKGSILVFVGAMLGATAAFLVGRYVARDWVAGRIASSPRFQAIDDAIAKDGRKIIFLLRLSPVFPFNLLNYSLGLSQISLKDYVIGSVGILPGTVMYVYLGSLVGNLAMLGTGDSSPQTATVQWIIRIVGLVATVAVTLYITRIARRALSEALPEE 240
BLAST of NO14G01280 vs. NCBI_GenBank
Match: ESA34670.1 (membrane protein [Leptolyngbya sp. Heron Island J]) HSP 1 Score: 105.9 bits (263), Expect = 3.500e-19 Identity = 73/210 (34.76%), Postives = 114/210 (54.29%), Query Frame = 0 Query: 229 LEHLFAWIERHMILGPVVFWSAVVVFSILCIPESALTIGGGYIFAQAHGVAVGIVLCTTLILTGGVVGGVVSFLIARYLAFDTVQGWGRRYRLLRALDLSLVENGAKMVFLLRLSPFLPTPPLSYLLGTTSVKLSDFILGSGGMLPWVVTCSYLGSALKGVNDLGGGRGRGRA-WKYVWYGLGAVATIGIVAGIGVYTRRAMEEVLREQS 438 L++ WIE + P+VF +V ++ +P S +T+G G +F GIV T L+ G ++G +FLI RYLA D V R+ +A+ ++ + G K++FL+RLSP P L+Y LG T+V L+D++LG+ G+LP + YLG V G+ R A W ++ GL VAT +V + R++++E L E S Sbjct: 29 LQNALNWIEGLGAIAPIVFIIMYIVITVSFLPASVVTLGAGAVF--------GIVKGTILVFIGAMLGATAAFLIGRYLARDWVSQKVAGNRIFKAIYDAIEKEGRKIIFLVRLSPAFPFNLLNYALGLTNVSLTDYVLGTVGILPGTILYVYLGGV---VGSAAAGQQRTPAEWAFLIIGL--VATFAVVFIVTKVARKSLQESLPETS 225 The following BLAST results are available for this feature:
BLAST of NO14G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01280 ID=NO14G01280|Name=NO14G01280|organism=Nannochloropsis oceanica|type=gene|length=2032bpback to top protein sequence of NO14G01280.1 >NO14G01280.1-protein ID=NO14G01280.1-protein|Name=NO14G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bpback to top Synonyms
Publications
|