NO14G00980, NO14G00980 (gene) Nannochloropsis oceanica

Overview
NameNO14G00980
Unique NameNO14G00980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3265
Alignment locationchr14:330160..333424 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:330160..333424 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00980.1NO14G00980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00980.1NO14G00980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00980 ID=NO14G00980|Name=NO14G00980|organism=Nannochloropsis oceanica|type=gene|length=3265bp
ATGTCCTCGTTCCCCCCTCGACAACGACAAGACAAGCCGCGGCAGCAGCA
GCGCCAATGGGAGGAAGGGTTGGAGGAGGAGAAGGAGGAGGAGCGGCAGT
ACCAACAACACCAACCCCTTTATCAGCAGCAGCACCATCAACCCCCCCCG
CAACAGCACCAGAATCAGCACCAGCAGCAGCCGCAGCGATACGCTCTCCT
CCTCAACCCGCACTTCGCCTCGCCCTCCTCCTCCACCTCCTCCTCCTTCA
CGCCCTCCTCCTCCCTACCTCCTCCTCTCCATCACAGTAACCATCAGCCC
CCCGACAACAATTCCAGTCCCCTGTCCCCGCGAGCAAATCAGAGCGATCT
CATGAACGCGTCTGGAGACCGACAGCGAAGAAGAAGAAAAAGAAAGGGGG
GAAGAGAGGAAGGGCAAGAGGGAAGAAATGTGAAGGGATTAGACTCGTGG
GTCCACGCGCAGGAAGCCAGCGTGCCGGGGTTATCTGACAAATTGCAAAG
GACAGCCAGCAGGCATCGGGAGAGGGAGGAAGGGCTCAAGGGCGGGAGAG
AGGGAGGGCCGGAAGGAGGACGGGATGATGGAGTCACTGAGGTGTACAAT
TATGAATATGGAGAGACGGATTCCTTGGTCCATGCCCAAGAAGCGAGCTT
ATCGAAGTTGGCGCAACAATTGCTCAGGACACAAAGCAGGCTGATGGAAA
TGGAGGGGGAGGGAGGGCAGGGGGGAGGCAGGGAAGGTGGGCTGGGACAA
GCAAAGGGGAAGGGGAAAACAAAAAACGGGAGAAGAAGAGGAGGGAGGGA
AGGAGGGAGGGAGGAGGCACGGGGCGAGGGAGTGGAGGCGTTGAAGGAGG
CCTTGCAAACGAAGGAGAGGGAGGTGGCGGTCCTCCTTCACTCCCTCGAA
GCTCTCCAGCTCCACGCCCCTCCATCCCCTCCTCCCCCTCCCCCTCCTCC
TTCGTCGATCTCTCCCATACACCGTCAGCCGGAAGCGGCAGGGCTGGAGG
GAGGGACGGAGGCCTCTGGGCACCAGAAGAAAACGGTTGAAGAGGAAAAT
GAGACAACAGGGGAAGGAAGGGAAAATCAGAAGGAGAGGAAGAAGAAAAA
GAGCAAGGAGAAGGGGAAGGGAGGGGGGCAGCGGAGGAGGGGGGAAAAGA
AGAGCCTGCTTGCGCTCAGTGACACGTACACGCGGGACAAGGAGTGGAGG
AAAGAGAATGAAGCTTCTTCATCCTCCCCTTCCTCCTCCTCCTCCCCTTC
TTCTTCCTCCTCCTCGTCGCCATCGTCGTCGTTTTCGGGCTCCTGCTCTT
CGTCAGAAGAGGAAAACGAGAGAACGCGGAAGAGGAGGAAAGAAAGGAGA
AGGGGGCAACAGCAGCAGCAGCAGCAGGAGCGGCAGCAGTTGAGGAGAAG
ACTGAAAAAGATCCGAGAGGAGGAGGAGGGGGAGGAGCGAGAGGACGTGA
GAAGGAAAGGGGGGGTGGGGAGGTGGAAGGATGCAGGGAAGGATGAGAAG
GAGGAGAAAGAGAAAGAGGAGAGGGAATGCATGAGGAAGAGCCTTGAAGA
GCTAAAGCAGCAGGTGCAGAAAGTATGCCTTGAGgtaccacccctccctc
cctcccttcctccctccatcccatccccttgcccatcttctactgtgctc
ggacacccattttctccctctctccctccctcccttcctcccttcctccc
tccctccttcagGCCGATGAGCATCGCAATTCCCTTCTTGCTCAGTGGGA
GGAAGAAAGGGCATCTTGGGCTCGAGAACAAAAACACTTGCTGTCAATTT
TGCTGCAGCAGCAGCACACGAGGGAGGAGGGAAGGAAGGAAGGAAGAGTG
GAGGAAGGGGGGGGTGGGAAAGAGGAGCCGTCATCGCTAATGGGACAAAG
GGTGGAGGAATTGGTGGGAGGACGAGAAGGAGGACGGGAAGGAGGAGGGG
GAGGAGGACGGGAAGGAGAAGGGGGAGGAGGAGGGGAAAGAGAGAGGGGG
AAGGAGGAGGAGGAGGAGGAGGAAGGGGAGAGAAGGTTGGCGAATTCGGT
CGAGGAAACAGCGGAAGATACCCGGAGgtaggttgatacggtccttcctc
cctcccttcttccctcccttcttcccttaatcaagcaaggatcacgtaag
gcatggagagagtcgcccactcactcctccatccctccttccctccctcc
ctcacttgccagGGCCCTCGTTCGACTGGAGGCAGCCCGTGAAGAGGCAC
AGAGAGAGATCAATCAGTTGCGGCATGAGGTGGGCTTGGAGGAGGAGGAA
GTGCAGGGGCTGCTGCTGGAGCTGGAGAAGGAGAGGGAGAGGAGTGAGGG
GCTTCGgtaagtagcgagggtgggagaaagggaggaaggggggcgaggag
tgaccattaatcctcagtgtcctgtaattccttcttttacttcattcgta
gGCGAGAGTTGGCAGCACGCACCCTTCAGAATGCACTACAGCATGGCTCT
CCCTCCCTCCCTCCCTCCTCCTCATCCTCCTCGGTGCGTCTCCACTATTT
TCCGGGGGCCAAAGAAGAACGTGGGAGAGGACGAGGAGCAGGAGGAAGGG
GGGGAGGAGGAGGAGGAGCAGCAGCGAAGGGGACGTCGCGCCTGTGCAAT
GTAGTAGAGCGGCTCCAAGCAAAGgtcagtcccaccctccttccctccct
ccctcccttcctttctattattaacgtgcggtgattgaaccagtatcctg
tcctatgcgcccactcattgttgcctccctccctccttccctccctccct
ccttttctttcccagGTTCCTTCTGCCGCTCAATACACTGCCCTCGAGCA
GCGGCTGCGGGAGAAGCAACGGTTGCTCATCCTGGCCAAACAAGAAATCA
AAATTCAAAAATTTAAAATCGAGGAATTGAAACAACAACGGCACCAAGAT
GAGCTCTGTGTGAATAGGTGGAAAGAAGAGATGAATGGGTGGGAGGTACG
GTGGAGGGAGGCAGGGAGGGAGAGCGCGCGTAAGAACCAGCTGCTCCAGG
CGTTGATGCGGGAGGTGCAGCAGGCACGGGGGGAAGGAGGGAGGGAGGAA
GGGACGGAGGGAGGGAGGGAGAGGGAGTTGGAGAGGGAGGTGGCGGAGGC
GAGGAAGGGGCTGGCGTTGTACGGGGAAGAGATTGCGCGGTTGAAACGGC
TAGCGAGGAGGATGGAGGAAGAGGGGAAGGGGGGAAAGAGGGAGTCTCGG
GCGGACTATGATTGA
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protein sequence of NO14G00980.1

>NO14G00980.1-protein ID=NO14G00980.1-protein|Name=NO14G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=922bp
MSSFPPRQRQDKPRQQQRQWEEGLEEEKEEERQYQQHQPLYQQQHHQPPP
QQHQNQHQQQPQRYALLLNPHFASPSSSTSSSFTPSSSLPPPLHHSNHQP
PDNNSSPLSPRANQSDLMNASGDRQRRRRKRKGGREEGQEGRNVKGLDSW
VHAQEASVPGLSDKLQRTASRHREREEGLKGGREGGPEGGRDDGVTEVYN
YEYGETDSLVHAQEASLSKLAQQLLRTQSRLMEMEGEGGQGGGREGGLGQ
AKGKGKTKNGRRRGGREGGREEARGEGVEALKEALQTKEREVAVLLHSLE
ALQLHAPPSPPPPPPPPSSISPIHRQPEAAGLEGGTEASGHQKKTVEEEN
ETTGEGRENQKERKKKKSKEKGKGGGQRRRGEKKSLLALSDTYTRDKEWR
KENEASSSSPSSSSSPSSSSSSSPSSSFSGSCSSSEEENERTRKRRKERR
RGQQQQQQQERQQLRRRLKKIREEEEGEEREDVRRKGGVGRWKDAGKDEK
EEKEKEERECMRKSLEELKQQVQKVCLEADEHRNSLLAQWEEERASWARE
QKHLLSILLQQQHTREEGRKEGRVEEGGGGKEEPSSLMGQRVEELVGGRE
GGREGGGGGGREGEGGGGGERERGKEEEEEEEGERRLANSVEETAEDTRR
ALVRLEAAREEAQREINQLRHEVGLEEEEVQGLLLELEKERERSEGLRRE
LAARTLQNALQHGSPSLPPSSSSSSVRLHYFPGAKEERGRGRGAGGRGGG
GGGAAAKGTSRLCNVVERLQAKVPSAAQYTALEQRLREKQRLLILAKQEI
KIQKFKIEELKQQRHQDELCVNRWKEEMNGWEVRWREAGRESARKNQLLQ
ALMREVQQARGEGGREEGTEGGRERELEREVAEARKGLALYGEEIARLKR
LARRMEEEGKGGKRESRADYD*
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Synonyms
Publications