NO14G00420, NO14G00420 (gene) Nannochloropsis oceanica

Overview
NameNO14G00420
Unique NameNO14G00420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1789
Alignment locationchr14:168564..170352 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:168564..170352 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002235NSK002235Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00420.1NO14G00420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|32100gene_5607Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00420.1NO14G00420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00420 ID=NO14G00420|Name=NO14G00420|organism=Nannochloropsis oceanica|type=gene|length=1789bp
ATGGTCCCACCACTGCCACGGCTGCTGCCAAAGTCCTCTGCACCAACCTC
CCCCCTTTCTCCCGCCCTCCCTCCACCACCGTCGTCGTCCCCACCGACAC
TCATTCTTCGAATCAAGCGCCGCCGGGAGGAGACCCCTGTGCCCTTACTT
CTCCTAGAGGCCACCGCCGCGGGGCCCCACAAGCGGGTCCGTCCCACCTT
GTCGGCACGTCTAGCTGCTTTGACAACTCAAGAGCGGGAGGATGAGGGAA
GGAGGGAGGAAGGAGAAAAGGGAAATATGACAGGGGAGGAACGGAGGAAA
CGCTTTGTGTTCAGTCGAGTTGAGACGGTAGAGACAACTGGAATGGATGA
AAACGAGGACGATGGAGGGCAGCAACAGCAGCAGCAACACGGGGGGAGGC
GGCTCCAAGGGTGGGAGAAGCCACGTCTTGCACAACGACGAGGATACGGA
GCAGCGCAGGAGAGAGGAATATTTCGGGAGATCCGACGGCTCTATTCTAG
GATAGATGATGAGGAGGAAGGAGAGAATAGAAGAGGAGGAGGAATTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGGAAGGGAAA
AGAAGAAGAGGAGGAGGAAGAGAAgtaggaggaagagagggaggacgaag
gcgtttcttccacttcattgacctagctcgatgctctcagacacctccct
cctccccctccttcctccccctccctcttcctcatcctcctcgaagacct
catgttatcttctcccccgtcgaccgccaactcgacgctgccatcgccac
tgcattcatgtccctccctcccccctccctccctcccacgctccctcccc
tcctgcctccgcgctcctctccctcatcctctcccagGGCGCCAACATCA
ATCATCAGCGGAAGAACGTGGGAGGAAGGGAGGGAGGAGTGACGGCACTG
ATGGCATGTGTATGGAGGGGGGAGGTACAAGCGACCGCGAGTCTCTTGGC
TGCAGGGGCAGACGTGAAGGTGAGGGACTGGGACGGACGGACGGCCTTGG
AATGGGCCGAAGAGGGAGGGAGGAGGGGAGGGAGGGAGGGAGGATGGGCG
GGGTGTGCGATGATGGTGAGGGAGGCGATGTTTGAGGCGCTTGAGGAGGA
GGAGGAGGAGGAATGGGCGTACGTGTACGATGTATATTCGATGGTGAGAA
AGGGGGTGAAGGAGGGAGGAAGGAGGGAGGAGGAGGTGCCTGTGgtgagg
gtcgaaggactctcattcgtgtcgaagaagggaggaagggaaggagggaa
ggagggcgaggaggaagagggagaggatgtgttggtgtttgaggaggggg
gggttggagtgaggacgagGACGGGGGGGAGGGAGGGGGAGAAGAGGAGG
ACTCGAACGAGGAAGGGCACTGGGCAAATGACTACCCGGAAGAGGAGAGC
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGGAGGGAAGGGAG
CGAGGGGAAGGGGGCGGGGCTGGGAGGGAGGTACCGTCTGAGGAGTGGGA
GTAGTGAGGAAGAGGAGGAAGAGGGGGAGGAGGAAGAGAGAGGAAGGGGG
AAAGGGAGGATAAGAGGGAGGAGAAGGTTTTGGGGCGGGGCGACTGGATG
TCTGGGGATGGGAGGAAGGATGATGGTGATTGGAAGGGGAGAGAGTGAGG
AGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGGGGAGGGG
GAAGAGGAAGAGGAAGAGGAGGGGGAGGAGGAAGAATAA
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protein sequence of NO14G00420.1

>NO14G00420.1-protein ID=NO14G00420.1-protein|Name=NO14G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MVPPLPRLLPKSSAPTSPLSPALPPPPSSSPPTLILRIKRRREETPVPLL
LLEATAAGPHKRVRPTLSARLAALTTQEREDEGRREEGEKGNMTGEERRK
RFVFSRVETVETTGMDENEDDGGQQQQQQHGGRRLQGWEKPRLAQRRGYG
AAQERGIFREIRRLYSRIDDEEEGENRRGGGIGGGGGGGGGGEGGGGEGK
RRRGGGREGANINHQRKNVGGREGGVTALMACVWRGEVQATASLLAAGAD
VKVRDWDGRTALEWAEEGGRRGGREGGWAGCAMMVREAMFEALEEEEEEE
WAYVYDVYSMVRKGVKEGGRREEEVPVDGGEGGGEEEDSNEEGHWANDYP
EEESEEEEEEEEEEEEGREGSEGKGAGLGGRYRLRSGSSEEEEEEGEEEE
RGRGKGRIRGRRRFWGGATGCLGMGGRMMVIGRGESEEEEEEEEEEEEEE
EGEGEEEEEEEGEEEE*
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Synonyms
Publications