NO14G00330, NO14G00330 (gene) Nannochloropsis oceanica

Overview
NameNO14G00330
Unique NameNO14G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3363
Alignment locationchr14:139955..143317 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:139955..143317 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom
IPR001471AP2/ERF_dom
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00330.2NO14G00330.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00330.1NO14G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00330.2NO14G00330.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00330.1NO14G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00330 ID=NO14G00330|Name=NO14G00330|organism=Nannochloropsis oceanica|type=gene|length=3363bp
CTCGCAGAGCACTGGCAGTCGATAAGAGAAGTCTTTTGCAAGCATTTATC
ACTTCTTTCACTCTCCTCAATGGCCCTACTCACCTTTTCACTCGACACTG
TCAGATCTCGCCACTAAGACAAAATACGAGAAAATCTGCTGTCTACATTA
CACTAAATGACTTGCACATTTGAAGTCTAATACATTACGAAGACTAGAGC
AGGATGTATCGTTTTAGCACATCCATCATTCTGGCCATTTGATTATTCTC
AAAAGCAAACTTGGGCTGAGATATGCCCCCAGGCCCTCTCACCAAGAGGC
TGCGAGCGAGAGAGGCTCTTCCTTGCTTCACCGCGCTAATCCCAGTGGAA
GCATTGGCCCACGTTACCCTTTTACTCCTGTTCTTTACGCCCTGCACCCG
CCCTCTTTAGTGCGTTCTGTACATTCCCAAAACGCAAGCTGCAGCAGCTA
AAATGTTCTCAGCAGAACATCATATGTCCTCAGCAGAACATCTCGCTGCC
CCTCAGCGATGATGACGCTGCATCGTTAACGTGTGTGCCCTAACCTAAAT
GTCATCATTTCATTCATTTCATTCCCAAATCATTCCCAACGACTTCATCA
CCACAACGGGCGCAGAATTTAAAGCATATGCTGATCATGGACGCTCGTGC
GGGCGTCCAGCACCAACACCAGTACCAGCACCAGCACCAGCACCACCAGC
ACCACCAGCACCAGCACCAGCACCAGCACCAGCAGCACCAGCACCAGCAC
CAGCACCAGCACCAGCAGCGCCAGCGTAATCCCTCTTTCAAGCTGCTGCT
GCAGCATCAGCAGGAATCCTGGCCGGTAGACGACGATGATGACGAAAGCA
ATCGCGAACCCTTCACGGGGCAGACAGCTGGCAAGACCGTGACCGGCAAA
GGGAAAGGCAGCACGACCCGATTCTCCTCCAGCTATCGTGGTAAGTTTGC
ATGCATGTCTGCGGCTCCGAATGAATATCACTTCAAATTCATGCATAATC
ACACACACACACACACACACACACACACACACACATTGGCAGGGGTAACG
AGCAAGGATGGCAAAAGTTGGGAGGCCAAGATAAACGAGAAGAGAAAAAC
CATCTACCTAGgtacgcccctctttccctcctttccctccttttcctccc
tccatccctccctcctttacctccttcttcatccactccaccgaatctca
ccttaattttccatttctacgttggcagacgatctgccatgtacccattg
gaggtttttcatacccctcccctcacctgtcctccctccctacatccctc
cctccctccctccctcacttcctcccccccttcccttacaagGCTACTTT
CGTAGTGAAGTGGAGGCTGCCCGTGCCTTCGACAAGGCGGCTCGCCGCTT
AAATCGACCTCTCAATTTCCCCGATGCAAAAGAAGATGAAGAGGACGGGG
AGGGCTCTTTTTCGCTGTCGCTGGAGGAGGGGAGGAAGAGAGGGAGGAAG
AGGAGGAAGGGGTTGAAAGAGAAGGATGAGAAGGAGGAGGAGGAGGAGGA
AGGTGGAGAGACTTGTGAAAGAGGAGGGAGGCATGAGATAAGGAGACCAG
GGGAGGGACTGCAAGGAAGAAGTGGGGCAAAGACGCCTCCCCCCCCAAAC
CCATTTATGCCGTCGCTCCACCAGCACCACCACCGTGAGCAGCAGCTGCA
TGACCACGCCCTTCATCCCGTCCTCTCCAGTCTCCTTTCGGATGACCAGC
AGCTCTCTGATGTACACCTCCCCAGTGCCAGTGCCAGCGAACGATTTTCC
AGGTCTCCCTCCTCCCACCACCATCGACACCCACCACCACCACTACCAGC
AGCAGCAACAACAGCAGCAACAGCAGCGGCGCCCCGGGACTCAGCCTCCC
TTGCTCGATCTATATCCTCTTCGTTCTCGTCCATATCTGAGCTGGCTCGC
CACTGGCAACAGCAGCAGCAGCAACAGCAGCAACAACAGCATGCGGCGAC
GCAAGTCTCTCGGAACTCCTCCCTCCCTCCCACCCTCACCACCATTAGTA
CTTTGCACGGGAAAGACAAATTCCTCCCTTCTTCTTCTTGCCTTCCCTCC
CTCCTACCCTCCCTCCTTCCCTCCCTACCTCCCTTCTCGGAGCAGGTCGA
AGAGGAACAGGAGCAGGACGAGGCGGGAAGAGGGGGGGAGGGGGGAGGGG
ATGAACCGCCTTCCTGGCCCATGGAGGAGGAAGGAGGTAGAGGGCAGGAA
GAGGGCGGGAAGAAGGACGAGGATGGGAGGGCGGAAGGGTTTTGGAGAGC
AGGAAAATGGGGCGAGGGCGAGAGGGAGGAAGGAAAAGAAGCCTCCGGTC
GTCGTGGTGGAAGAGGGGAGTGGGCAGGGGAGGAGGGAGGGAGAGGGAGA
GGAAAGGAGGGGAGGAGGGCGGAAGCTGCCCACATACACATGTTGCGGCG
GCGTGCAAAGCGGCGGTGGGCAGGGGCAGATAAAGGGAGGGAAGGTGGGA
GGGAGGGGGATGGGATGAGTCGTGTTGAGAAGAGAGCATGGATGGGAGTG
AAAGACGCCATTCTCTCCATCTACCTCCAGAGTCGCGCTGTGGATACGGC
TGCCTTGGAATCCCTCTACCTCCTCTCAAGCCGACCGCTCCCCCCTCCGG
TCCTTCGCTTTGTGAGGGAGGTTGCCCGGGAGGGGGGGAAGGAGGAGGTA
GAGGAGGAGGAGGAGGAGGAGGAGGGACGGTATGAGGGGTGGGCGGCGGG
GTTTGTGTGTCTGGTGAGGGGGAGGGTGTTTGGCAGAGGCGTGGGTGGAA
GGGGAGGAGGGAGGGAGGGAGGGAAAGAGGGGGAGTTGGCGACTAGAGGG
CGAGGAGGAGTGGGGGGTCGAGGAGAGGGAGAGAAAGAAGCAGAGAAGGA
GAAAGAGAGAGAGAAAGAATGTGAGAGGGAGAGGGAGAAGGAGAGGGGGA
GGGAGAGAGAGAGGCCTGTCACTGTCTATATATGTCCGCTGTAGATTAAA
GCATATAACCATTAAACAGTGGATGGCCCCAAAATCCAATCCAAGCACGT
GCAGACTGCGGGGGGTCAAACGGGAGGCACAAAGAAAAAGATGAAGCATC
GAAGTGGGTTGAAGCGTAGCGAAAGAGGGGGAGGGTCAAACCGAAAGAAG
AGGAGGCGTCCGTTGAAGGTCAGGTTTGAATCCGCCTGCAATTTGAAAGT
CGATGATTCTGTATAATCGATCTGCCAGAGGGAGGGAGATGACGAAGCAA
GCCGCAAAATACACCCATATGACCAAATAATCAAGGACTTGCAATAACAA
CAGGAGCAATAGTAATACTACAAAATTTAAAAATAAAACTAATCGGTCGA
GCATGGATGAAAA
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protein sequence of NO14G00330.2

>NO14G00330.2-protein ID=NO14G00330.2-protein|Name=NO14G00330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=712bp
MLIMDARAGVQHQHQYQHQHQHHQHHQHQHQHQHQQHQHQHQHQHQQRQR
NPSFKLLLQHQQESWPVDDDDDESNREPFTGQTAGKTVTGKGKGSTTRFS
SSYRGKFACMSAAPNEYHFKFMHNHTHTHTHTHTHTLAGVTSKDGKSWEA
KINEKRKTIYLGYFRSEVEAARAFDKAARRLNRPLNFPDAKEDEEDGEGS
FSLSLEEGRKRGRKRRKGLKEKDEKEEEEEEGGETCERGGRHEIRRPGEG
LQGRSGAKTPPPPNPFMPSLHQHHHREQQLHDHALHPVLSSLLSDDQQLS
DVHLPSASASERFSRSPSSHHHRHPPPPLPAAATTAATAAAPRDSASLAR
SISSSFSSISELARHWQQQQQQQQQQQHAATQVSRNSSLPPTLTTISTLH
GKDKFLPSSSCLPSLLPSLLPSLPPFSEQVEEEQEQDEAGRGGEGGGDEP
PSWPMEEEGGRGQEEGGKKDEDGRAEGFWRAGKWGEGEREEGKEASGRRG
GRGEWAGEEGGRGRGKEGRRAEAAHIHMLRRRAKRRWAGADKGREGGREG
DGMSRVEKRAWMGVKDAILSIYLQSRAVDTAALESLYLLSSRPLPPPVLR
FVREVAREGGKEEVEEEEEEEEGRYEGWAAGFVCLVRGRVFGRGVGGRGG
GREGGKEGELATRGRGGVGGRGEGEKEAEKEKEREKECEREREKERGRER
ERPVTVYICPL*
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protein sequence of NO14G00330.1

>NO14G00330.1-protein ID=NO14G00330.1-protein|Name=NO14G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=678bp
MLIMDARAGVQHQHQYQHQHQHHQHHQHQHQHQHQQHQHQHQHQHQQRQR
NPSFKLLLQHQQESWPVDDDDDESNREPFTGQTAGKTVTGKGKGSTTRFS
SSYRGVTSKDGKSWEAKINEKRKTIYLGYFRSEVEAARAFDKAARRLNRP
LNFPDAKEDEEDGEGSFSLSLEEGRKRGRKRRKGLKEKDEKEEEEEEGGE
TCERGGRHEIRRPGEGLQGRSGAKTPPPPNPFMPSLHQHHHREQQLHDHA
LHPVLSSLLSDDQQLSDVHLPSASASERFSRSPSSHHHRHPPPPLPAAAT
TAATAAAPRDSASLARSISSSFSSISELARHWQQQQQQQQQQQHAATQVS
RNSSLPPTLTTISTLHGKDKFLPSSSCLPSLLPSLLPSLPPFSEQVEEEQ
EQDEAGRGGEGGGDEPPSWPMEEEGGRGQEEGGKKDEDGRAEGFWRAGKW
GEGEREEGKEASGRRGGRGEWAGEEGGRGRGKEGRRAEAAHIHMLRRRAK
RRWAGADKGREGGREGDGMSRVEKRAWMGVKDAILSIYLQSRAVDTAALE
SLYLLSSRPLPPPVLRFVREVAREGGKEEVEEEEEEEEGRYEGWAAGFVC
LVRGRVFGRGVGGRGGGREGGKEGELATRGRGGVGGRGEGEKEAEKEKER
EKECEREREKERGRERERPVTVYICPL*
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Synonyms
Publications