NO13G02920, NO13G02920 (gene) Nannochloropsis oceanica

Overview
NameNO13G02920
Unique NameNO13G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1905
Alignment locationchr13:812601..814505 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:812601..814505 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02920.1NO13G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633270gene_9017Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02920.1NO13G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02920 ID=NO13G02920|Name=NO13G02920|organism=Nannochloropsis oceanica|type=gene|length=1905bp
ATGATCACAGCAGCCAGTGCTAGCCACATGATGAACGAGGAGGCACTGGA
TCATCACGAGCAGCAGTACCACGAACAGGAGGAGGCAGAGGAGGAGGGGA
TTCGCGTGGAGGTAGAGGGACGCTTGGGGGTAAATGAGATACTCCCTCCT
TTTTCCGCCGAGGAGGACGACGACGACGGGGAGGCAGCGGCAGCAGACTT
GCTAGAGGAGAGAGGGGAGGAGGAAGGAGGGCATGACGGAGATGAAGAGG
ATGCGCACCAACCTCATAACGCGACGGCTGCAGATGATACCATCTTCGAA
GCTGCGGGAGAGGGCGGAGAGGAGGGGGAAGAGGAAGGGGGAGAAGGAGT
AGTGATGCAGGACGAAGGGGTGGAGGGATGCGTGGAGGTATGTCTGGAGG
GAGGAGGGGAGGAGGAAGGCGCCGAAGGAGAAGGAGGTGAGGGGGCGATA
GTCATAGAGGAAGATACGGAGGAAGAAGCGGTGGCCACGCTGCTGGCAGC
GACAGGGGAGGAGGAAGAGGGGGGAGGAGATGAAGAGAAGGAGGAGGAGG
AGGAGGAGCAGGAGGAGGAGGAGGAGGTAGAGTATGTAGCGCACGTGCCA
GGGACAGGGGAAGGAGGCCTCTACGACGATGAGGAGGAAGGGGTGGAAGT
AGAGGGAGCAGATTTCACAGCAGCAGCAGCAGCAGCATCAGCAGCAACAA
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTGCAGCACTGGCTAGAGGA
GGTGGAGGACGAGGTCTTGACCGAAGGGAAGGAGGAGAAGAAGATCTAAG
AGACGGCAACGGAAGCTCGATTTCTTCCACCTCGGGCTCCGCCTCCTCCT
CCCCCTCCCCCTCTGCCTCGGCCACCGCTCCTCCCTCCCTCCCTGCCCCT
CCCTCCCCAAACGCATTCCTCCTCCAATGCCTAGAAAACGCAACAATTGC
CACATGGGCCCCTTCCGAGCTCGGGCGACTCGTGGCCGTCCTTGCGCAGA
CAATGCACTGGCACCTCAATCCCCCCCTCCTCCATGCCTTCCTCTCCTCC
CTCCCTCCCTCCCTCCTTCCCCTCCGCACCCTTCCCGCGTTGCTCAAGGG
TTTGAACGAGCGTCATTATTGGATGGAGGGTAGGGAGATAGTACGACTGT
TCTGGGATAGGGCAGGGATGGAGGAGGAGGAGGATGGGAGGGAGGGAGGG
AAGGAGGGGTTTGGAAGGGCGGTAAAGGAGGGAGTGAGGGAGGGCGTGTT
GTTCTTGTTGGACCCGGGGTGTGTGGATGCGGTGGTGCGATGTTGCCTTG
GGAAAGGGGGGAGCGAGGGAGGAAGGGTGGGAGGGGAGGAGGGATGGCAT
ATGCTGGTGGACATTGTGGAGGCAGCTAAAAAGAGGGAAGATAGACGGGC
ACTGGTGCTTGCAGTGGCGAGGGAGGTGAAGAAGGGGGGAGGGGGTGAGG
ATGAAGGGGAGGAGGAGGAGGAGGAGGATTTGGAGCAATTTCTGGCGCAG
CTGCCGGGGGGGAAAGAGGAGTGGGAGAGGGAGGTCGATATGATGAGGGG
GGTGGTTGAGATCGAGGATGAGGAGGAGGGAATGGAGGAGGGAGGGGAGG
AGGGAGGGGAGGAGGGAGAAGAGAGGGTGGGAGGAGGAGGAGGAGGTGGA
GGGATAGTAAGGAAGAGGGGTGAGGAGGAGGAGGAGGAGGTGCACGTGAT
GGAGGGGGAAGAAGGGGAGGAGGGGGAGGGAGAGAGGGAGGAAGAGGGAA
AAGGGGATGAGGAGGGCGAGGAAGAGGAGAGAGAGCCGGCTCTGAAGAGG
CATCGGGTGGGGGAGGAAGAGGAAGGGGAAGGAGGGATGGAGGGAGGGAT
TGAGGGAGAAGAGAAAGTAGCAGTAGCAGCAATGCTAGATGCAACCGAGG
GATGA
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protein sequence of NO13G02920.1

>NO13G02920.1-protein ID=NO13G02920.1-protein|Name=NO13G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MITAASASHMMNEEALDHHEQQYHEQEEAEEEGIRVEVEGRLGVNEILPP
FSAEEDDDDGEAAAADLLEERGEEEGGHDGDEEDAHQPHNATAADDTIFE
AAGEGGEEGEEEGGEGVVMQDEGVEGCVEVCLEGGGEEEGAEGEGGEGAI
VIEEDTEEEAVATLLAATGEEEEGGGDEEKEEEEEEQEEEEEVEYVAHVP
GTGEGGLYDDEEEGVEVEGADFTAAAAAASAATTAAAAAAAAAGAALARG
GGGRGLDRREGGEEDLRDGNGSSISSTSGSASSSPSPSASATAPPSLPAP
PSPNAFLLQCLENATIATWAPSELGRLVAVLAQTMHWHLNPPLLHAFLSS
LPPSLLPLRTLPALLKGLNERHYWMEGREIVRLFWDRAGMEEEEDGREGG
KEGFGRAVKEGVREGVLFLLDPGCVDAVVRCCLGKGGSEGGRVGGEEGWH
MLVDIVEAAKKREDRRALVLAVAREVKKGGGGEDEGEEEEEEDLEQFLAQ
LPGGKEEWEREVDMMRGVVEIEDEEEGMEEGGEEGGEEGEERVGGGGGGG
GIVRKRGEEEEEEVHVMEGEEGEEGEGEREEEGKGDEEGEEEEREPALKR
HRVGEEEEGEGGMEGGIEGEEKVAVAAMLDATEG*
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Synonyms
Publications