NO13G02410, NO13G02410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G02410 vs. NCBI_GenBank
Match: CBJ27373.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.0 bits (323), Expect = 1.800e-26 Identity = 80/209 (38.28%), Postives = 115/209 (55.02%), Query Frame = 0 Query: 22 FLSVGEPYQ-DKSDLPERWKGKRMVCGGTPQE----TFSRLKYPEGEPYVAVPLYIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHD-DKGTTRDLANGASK-TFLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHL 224 ++S+G+ Y+ +K LP+RWKGK + P+ FSRL+Y EPY + + + + +D RK GFG+KDA + EFT IRTEQYR++LR E ++ + + Q ++ D R +G + LYD+GRS+ T FDPK RDR+Y S G + R PYR +++IG+G W P P K F DKSHL Sbjct: 7 YISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEY-RSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSI----GQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHL 210
BLAST of NO13G02410 vs. NCBI_GenBank
Match: CBJ26021.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 128.3 bits (321), Expect = 3.100e-26 Identity = 81/232 (34.91%), Postives = 120/232 (51.72%), Query Frame = 0 Query: 1 MYSIKRRHPKLVDMPDGEPQPFLSVGEPYQDKSDLPERWKGKRMVCGGTPQE----TFSRLKYPEGEPYVAVPLYIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDK-GTTRDLANGASK-TFLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHLKTA 227 MYS KR + +V E F+SVG+PY++ LP RWKGK+ G P F++LKY EP+ + + + + R GFG+KDA KR EFT IRT+QYRE+LR+E + S+ +++++ K ++R G + LYD+GRS F+P R+ D +Y + R PYR +++IG W + P P K F D+SHL+ A Sbjct: 1 MYSTKRVNKNIV-----EGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKY-SSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYD----FQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVA 222
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_024581475.1 (hypothetical protein PHALS_01430 [Plasmopara halstedii] >CEG45106.1 hypothetical protein PHALS_01430 [Plasmopara halstedii]) HSP 1 Score: 115.9 bits (289), Expect = 1.600e-22 Identity = 83/218 (38.07%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 20 QPFLSVGEPYQDKSDL---PERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIH---GHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHLKT 226 + +L++G+PY+D + R KGK+ + ++T + L Y E + Y + PL Y++++ +DTRK+GFGSKDAS+RDEF + IRTEQYRE L E L K Q+ + + +RD G KT LYDIGRS+ T F+ K RD +Y A + K P+ L+SE IG G V + P G+ K F D SHL T Sbjct: 13 ESYLTIGDPYRDPHIIEGKSSRHKGKQ-IFTVPAKDTSNGLGYFEKKSYTSDPLQDNTAYLKSQPMDTRKSGFGSKDASRRDEFMSHIRTEQYRETLHTENKILDKQK----QKDPPYFSAALNSLNQSRDFPEGLCKTKHLYDIGRSQNTEFNQKSHRDTFYTMRA-GNSQYKRNNGPFMLTSESIGLGADDVANNRP-TPKGASTKQFFDHSHLHT 223
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_002906755.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66156.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 111.7 bits (278), Expect = 3.000e-21 Identity = 79/215 (36.74%), Postives = 110/215 (51.16%), Query Frame = 0 Query: 20 QPFLSVGEPYQDK---SDLPERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHLKT 226 Q +L++G+PY+D R KGK+++ + T + Y E + Y + PL Y++++ +DTRK+GFGSKDAS+RDEF + IRTEQYRE L E+ L K + D G +T LYDIGRS+TT F+ K RD +Y + K P+ L+SE IG G V P G+ + F D SHL T Sbjct: 13 QSYLTIGDPYRDPHLIESKNSRHKGKQILT-VPAKNTCNGSGYFEKKTYASDPLQDNTAYVKSQPMDTRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEMKILDKQKQN-DPPGLFDALDSLNQNHHFPEGLQETKHLYDIGRSQTTEFNQKSHRDTFYTMRV-GNSHYKRNNGPFMLTSESIGLGADDVTGNRP-TPKGASTRQFYDHSHLHT 223
BLAST of NO13G02410 vs. NCBI_GenBank
Match: CCA14133.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 110.5 bits (275), Expect = 6.800e-21 Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 22 FLSVGEPYQDK---SDLPERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDD---KGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQ-RSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHL 224 +L++G+PY+D R+KGK+M+ + T + L + + + Y + PL Y+ + +DTRK GFGSKDA +RDEF + IRTEQYRE L EL + K R ++++ + + T G +T FLYDIGR + T FD K RDR+Y RS+ +T+ K P+ L+SE IG G V P S K F D SHL Sbjct: 15 YLAIGDPYKDSHQHDGKDPRFKGKQMMT-IPAKNTCNGLGFFDKKTYSSDPLKDNTMYLTTQPMDTRKKGFGSKDAKRRDEFMSHIRTEQYRETLETELKLHEKQK---RVREELGVQETPIMEETKHPFPQGLVETKFLYDIGRLQVTEFDQKSHRDRFYTIRSSESTH--KRNNGPFMLTSEMIGLGAEDVVGNKPNPKNAST-KQFYDHSHL 222
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_008907541.1 (hypothetical protein PPTG_13549 [Phytophthora parasitica INRA-310] >ETI43633.1 hypothetical protein F443_11487 [Phytophthora parasitica P1569] >ETK83702.1 hypothetical protein L915_11184 [Phytophthora parasitica] >ETL37117.1 hypothetical protein L916_11081 [Phytophthora parasitica] >ETL90288.1 hypothetical protein L917_10981 [Phytophthora parasitica] >ETM43591.1 hypothetical protein L914_11009 [Phytophthora parasitica] >ETN07165.1 hypothetical protein PPTG_13549 [Phytophthora parasitica INRA-310] >ETO72291.1 hypothetical protein F444_11561 [Phytophthora parasitica P1976] >ETP13449.1 hypothetical protein F441_11406 [Phytophthora parasitica CJ01A1] >ETP41519.1 hypothetical protein F442_11383 [Phytophthora parasitica P10297] >KUF77096.1 hypothetical protein AM587_10012956 [Phytophthora nicotianae] >KUF88011.1 Interferon-stimulated 20 kDa exonuclease 2 [Phytophthora nicotianae]) HSP 1 Score: 109.0 bits (271), Expect = 2.000e-20 Identity = 78/213 (36.62%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 20 QPFLSVGEPYQDK---SDLPERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHL 224 Q +L++G+PY+D R KGK+++ + T + Y E + Y + PL Y++++ +DTRK+GFGSKDAS+RDEF + IRTEQYRE L E+ L K D + G +T LYDIGRS+TT F+ K RD +Y + K P+ L+SE IG G V P G+ + F D SHL Sbjct: 13 QSYLTIGDPYRDPHLIESKNSRHKGKQILT-VPAKNTCNGSGYFEKKTYASDPLQDNTAYLKSQPMDTRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEMKILDKQK-QDDPPGLFDALDSLNQSHHFPEGLQETKHLYDIGRSQTTEFNQKSHRDTFYTMRV-GNSQYKRNNGPFMLTSESIGLGADDVTGNRP-TPKGASTRQFYDHSHL 221
BLAST of NO13G02410 vs. NCBI_GenBank
Match: OWZ22958.1 (hypothetical protein PHMEG_0002262 [Phytophthora megakarya]) HSP 1 Score: 108.6 bits (270), Expect = 2.600e-20 Identity = 77/213 (36.15%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 20 QPFLSVGEPYQDKSDLP---ERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHL 224 Q +L++G+PY+D + R KGK+++ + T + + Y E + Y + PL Y++ + +DTRK+GFGSKDAS+RDEF + IRTEQYRE L E+ L K + D G +T LYDIGRS+ T F+ K RD +Y + K P+ L+SE IG G V P G+ + F D SHL Sbjct: 13 QSYLTIGDPYRDPHQIEGKNTRHKGKQILT-VPAKNTCNGMGYFEKKTYASDPLQDNTAYLKTQPMDTRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEMKILDKQKQN-DPPGLFDALDTLNQNHHFPEGLQETKHLYDIGRSQNTEFNQKSHRDTFYTMRV-GNSQYKRNNGPFMLTSESIGLGADDVTGNRP-DPKGASTRQFYDHSHL 221
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_009515813.1 (hypothetical protein PHYSODRAFT_477024 [Phytophthora sojae] >EGZ28538.1 hypothetical protein PHYSODRAFT_477024 [Phytophthora sojae]) HSP 1 Score: 107.8 bits (268), Expect = 4.400e-20 Identity = 77/215 (35.81%), Postives = 109/215 (50.70%), Query Frame = 0 Query: 20 QPFLSVGEPYQDKSDLP---ERWKGKRMVCGGTPQETFSRLKYPEGEPYVAVPL-----YIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHLKT 226 Q +L++G+PY+D + R KGK+++ + T + Y E + Y + PL Y++++ +D RK+GFGSKDAS+RDEF + +RTEQYRE L E+ L K + D G +T LYDIGRS+ T F+ K RD +Y + K P+ L+SE IG G V P G+ K F D SHL T Sbjct: 13 QSYLTIGDPYRDPHLIEGKNSRHKGKQILT-VPAKNTCNGSGYFEKKTYSSDPLQDNTAYLKSQPMDLRKSGFGSKDASRRDEFMSHVRTEQYRETLHTEMKILDKQKQN-DPPGMFDALDSLNQNHHFPEGLQETKHLYDIGRSQNTEFNQKSHRDTFYTMRI-GNSQYKRNNGPFMLTSESIGLGADDVSGNRPN-PKGASTKQFYDHSHLHT 223
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_009039968.1 (hypothetical protein AURANDRAFT_66549 [Aureococcus anophagefferens] >EGB05320.1 hypothetical protein AURANDRAFT_66549 [Aureococcus anophagefferens]) HSP 1 Score: 107.5 bits (267), Expect = 5.700e-20 Identity = 76/215 (35.35%), Postives = 107/215 (49.77%), Query Frame = 0 Query: 22 FLSVGEPY-QDKSDLPERWKGKRMVCGGTPQET------FSRLKYP-EGEPYVAVPLYIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKELASLKNSKCHWRQQQQIHGHDDK-----GTTRDLANGASKTFLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHL 224 +++VG+PY K LP RWK K+ P FS + + E Y Y++ + D RK GFG+ DAS+RDEF+ IRTEQYRE L+KE + N ++ + + K T +++ N LYD+GRS T FDPK RD++Y T + R R +S++IG G W K P + S K F D+SHL Sbjct: 18 YITVGDPYIGTKDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGRANNNGYDEDAIEELMKKENAKVKKFVETKKEIGN------LYDVGRSIHTEFDPKNGRDQFYSMKHGYT--YEKRMGNNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHL 224
BLAST of NO13G02410 vs. NCBI_GenBank
Match: XP_012210984.1 (hypothetical protein SPRG_16299 [Saprolegnia parasitica CBS 223.65] >KDO18309.1 hypothetical protein SPRG_16299 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 107.5 bits (267), Expect = 5.700e-20 Identity = 79/217 (36.41%), Postives = 110/217 (50.69%), Query Frame = 0 Query: 22 FLSVGEPYQDKSDL---PERWKGKRM-------VCGGTPQETFSRLKYPEGEPYVAVPLYIEAESIDTRKAGFGSKDASKRDEFTNFIRTEQYREVLRKE--LASLKNSKCHWRQQQQIHGHDDKGTTRDLANGASKT-FLYDIGRSRTTPFDPKRRRDRYYQRSAPATNGSKPRFSPYRLSSEEIGAGLWQVKSMPPRAAPGSCHKAFMDKSHLKT 226 +LSVG+PY+D + +R K K+ C G + F R Y +P V +Y++ + +TRKAGFG+KDAS+RDEF + +RTEQYRE L +E +A +K H D T G +T FLYDIGR++ T F+ K RD +Y + + + LSSE +G G QV + A +C K F D SHL T Sbjct: 15 YLSVGDPYRDPHIIEGKSDRHKSKQFQTAPAKDTCDG--KGYFDRKTY-SSDPLVDGVMYLKTQPPETRKAGFGTKDASRRDEFMSHVRTEQYRETLHREDTIAQTGIAK-HRATHPDEEDEDAVDTKHQFPEGLKETKFLYDIGRTQVTEFNQKSHRDTFYTLRT-GNSQFRRNNGHFVLSSESVGVGASQVGNNGTHAR-NACTKQFYDHSHLHT 225 The following BLAST results are available for this feature:
BLAST of NO13G02410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02410 ID=NO13G02410|Name=NO13G02410|organism=Nannochloropsis oceanica|type=gene|length=684bpback to top protein sequence of NO13G02410.1 >NO13G02410.1-protein ID=NO13G02410.1-protein|Name=NO13G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bpback to top Synonyms
Publications
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