NO13G02240, NO13G02240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02240 vs. NCBI_GenBank
Match: EWM21880.1 (u3 small nucleolar rna-associated protein 18 [Nannochloropsis gaditana]) HSP 1 Score: 655.6 bits (1690), Expect = 1.500e-184 Identity = 369/623 (59.23%), Postives = 431/623 (69.18%), Query Frame = 0 Query: 7 SGRRGNGEGGAKAESRRQEMNEGDAAVPAQDEEDTSPLFYLDREE-----SVEVEGFEQEEEGNVVPKQLKRQKKQG--------EMQRRRQGKITEADKDEEECMLERLVFGARDTAVLFNDQEAAFQDDRC----LGCRAVAKF-----ARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAGMTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYD 608 SG R + GGA + D+ P ++D +PLFY+DREE +++V+ E ++E V P++ + G LERLVFGARDT L ++ D LG + R PAW+D+DDE + V++A KDRLRKLRR PDE+DISGADYQERLRARF + + ALDWA LP TP G+RG R RS+APLV+G+ G +LQP TLEV RCRDAN+QEPS+A+VQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRN+KVAGVFF DLPI +A+FVD F +VVVSGRRPFFYW+D +G + RV RL+GREEKSLERFVASPDGQWLAFTGKDGY++LVGA+SKQWAGEFKMNGTAR+++FSADG+HL+ASGGDAVVYRWDLRS RCLARFHNEGGTVTSALAAS AGM AVGAESGVVNLYE+ VLG + H++ AL P KALTHL T VD+LAFNHDG LLAMASKW+RDALRVVHVPSRTV++NWPTGQTP+RYPSALAFSPNSGMLAVGNDRGRVLLYRL+HY+ Sbjct: 3 SGARRSSRGGAGKPPPGEGERVPDSQPPDAPDKDAAPLFYVDREENEMVGTLDVDN-ELDQEAGVGPEEANIIAQAGPSXXXXXXXXXXXXXXXXXXXXXXXXXXTLERLVFGARDTEALLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTP------GDRGDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSAPLVVGS-GTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAAS-AGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616
BLAST of NO13G02240 vs. NCBI_GenBank
Match: XP_002185694.1 (anthranilate synthase. anthranilate synthetase. chorismate lyase, partial [Phaeodactylum tricornutum CCAP 1055/1] >ACI65164.1 anthranilate synthase. anthranilate synthetase. chorismate lyase, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 368.2 bits (944), Expect = 4.800e-98 Identity = 208/476 (43.70%), Postives = 300/476 (63.03%), Query Frame = 0 Query: 139 PAWQDDDDEAVRVNIASKDRLRKLRRQPDE---KDISGADYQERLRARFQESSKMA--LDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGG---LLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAGMTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHY 607 PAW D+DD + VN+ + RLRKLR+ E + G D +ERLR R+Q +++ DWA L +D + ++ G+N E+ D DF L ST+ L+ + +L P TL +VRC DAN +P+++++QAV FHP++ LL TAGLDKTLRFFQV ++EKV G+ FP LPI SASF+ G VVVSGRR FFY YDTV+G + +++GREE+SLE+ SPDG+ +AF G DGYIIL A +KQW + K++G+ R+++F+ DG+++LASG D +YRWDLR+ RC+ RF N+ GT+TS LAAS + AVGAESGVVN++ + + G A+ + P K++ +L T+ D + FN DGQ+LA +S+ ++++++++HVPS TV++NWPT +TP+ + ++ FSP S LAVGND+G+ LLYRL HY Sbjct: 5 PAWVDEDDVGLEVNLLATSRLRKLRKSKAEVAALALCGTDLEERLRQRYQRTTQATARTDWARL----SDSSTL----------------IDKDAGNNDEDS-----DSDFKSL--STSLLL----HSTSTRRLPPNTLNLVRCPDANQSDPNQSVLQAVHFHPASDADQPLLLTAGLDKTLRFFQVGVDKSEKVHGIHFPKLPIYSASFL-----GSSGNVVVSGRRSFFYIYDTVAGKLELIPKILGREERSLEKCFPSPDGRTIAFVGNDGYIILFDAHAKQWIADLKISGSVRAITFTPDGEYILASGSDGEIYRWDLRTRRCVERFTNQDGTITSYLAASSRHL-AVGAESGVVNMFSEHSM-------GYRAVGHVVVSERNPMKSILNLHTSADMVRFNGDGQILAFSSRREKNSMKLLHVPSATVFSNWPTSKTPLGFVWSMDFSPESKYLAVGNDKGKCLLYRLMHY 436
BLAST of NO13G02240 vs. NCBI_GenBank
Match: PNX71852.1 (U3 small nucleolar RNA-associated protein 18 [Trifolium pratense]) HSP 1 Score: 363.6 bits (932), Expect = 1.200e-96 Identity = 211/526 (40.11%), Postives = 302/526 (57.41%), Query Frame = 0 Query: 90 EADKDEEECMLERLVFGAR--DTAVLFNDQEAAFQDDRCLGCRAVAKFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEE---GDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAGM-TAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 + D DE + L F R DT + +++A F D G R P W D+++E V VNIAS +RLRKLR++ DEK ISG++Y RLRA+ + ++ DWA L G GD+S++E +N + D+D + R+ LV+ + + KL P +E + DAN+Q+PS +++ +VQFH G LL GLD+ LRFFQ+DGKRN K+ +F D PI ASF+ + QV++SGRR FFY D V + ++ L+GR+EKSLE F SPD Q +AF G +G+I+LV KSKQ G KMNG+ RS++F+ DGQ LL++GGD VY WD+R+ C+ + +EG +AL S G A G+ SG+VN+Y + LG + P K + +LTTTVD + FNHD Q+LA+ S + +L+++H+PS TV++NWP T ++YP + FSP G +AVGN G+VLLY+L+HYD A Sbjct: 78 KGDDDEVDAEASDLFFTDRSADTVLTGYEEDADFLD----GSSDDDALQRKPVWVDEEEEKVTVNIASVNRLRKLRKEEDEKLISGSEYVARLRAQHVKLNR-GTDWAQLD------------------SGSKMGDSSDDELTDDENKAVVSRGYEDEDMSDILRTNEDLVVKS-----SSKLLPGHIEYSKLVDANIQDPSNSVINSVQFH-QNGQLLLAGGLDRKLRFFQIDGKRNTKLESIFLEDCPIRKASFLP-----DGSQVIISGRRKFFYSLDLVKASVDKIGPLLGRDEKSLEVFEVSPDSQMIAFVGNEGHILLVSTKSKQLVGTLKMNGSVRSLAFTQDGQRLLSAGGDGHVYHWDMRTRTCMHKAVDEGCLNGTALCTSPVGTHFAAGSSSGIVNIYNSDEFLGGKRK---------------PIKTIDNLTTTVDFMKFNHDSQILAICSSMKKRSLKLIHIPSYTVFSNWPHPNTSLQYPRCIDFSPRGGFMAVGNSSGKVLLYKLRHYDHA 554
BLAST of NO13G02240 vs. NCBI_GenBank
Match: CBJ32524.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 354.4 bits (908), Expect = 7.200e-94 Identity = 189/353 (53.54%), Postives = 240/353 (67.99%), Query Frame = 0 Query: 265 EKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLI--GREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALA------ASLAGMTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 E P +RC+DAN +P+KA V+AV FHP TG LL G DKTLR FQVDG RN KV +FF DLPI SA+F EQ +V+GRR FFY YD V+G +++ R+ GR EK LE F ASPDGQWLAF G GY++L+ +K+KQWA +FK+N TA +++FS D +++LASG DA VY++D+RS RC+ RF NEGGT TS+LA +S +TAVG++SGVVN+Y D+D L E G + R + P KA+ LTT V + F+ DGQ+LA+AS RDAL+VVH S T + NWPT +TPVRYP AL FSP G LAVGNDRG VLLYR++HY +A Sbjct: 11 ETNSPSGHVALRCKDANQHDPAKATVRAVSFHP-TGELLLAGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGA------EQAIVTGRRSFFYSYDVVTGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLASKGPTSSSPQRLTAVGSDSGVVNVY-DADAL-----ETGKRVLRPS-----PLKAVMSLTTPVTTTKFSPDGQMLAIASNQQRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 345
BLAST of NO13G02240 vs. NCBI_GenBank
Match: XP_004485620.1 (PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cicer arietinum]) HSP 1 Score: 352.4 bits (903), Expect = 2.700e-93 Identity = 223/596 (37.42%), Postives = 322/596 (54.03%), Query Frame = 0 Query: 39 EDTSPLFYLDREESVEVEGFEQEEEGNVVPKQLKRQKKQGEMQRRRQGKITEADKDEE---ECMLERLVFG------------ARDTAVLFNDQEA-----AFQDDRCL---GCRAVAKFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEE-GDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAGM-TAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 ++ P RE+ V+ + E +EG+V ++K++K+ G+ ++ ++ E + E + L FG A+ + + F D+ A +Q+D C R P W D+++E V VNIA +RLRKLR++ DE ISG++Y RLRA+ + ++ DWA L G D+S++E D+ + +D + R+ LV+ + + KL P +E R DAN+Q+PS + +VQFH G LL GLDK LRFFQ+DGKRN K+ +F D PI ASF+ + QV++SGRR FFY D V ++ L+GREEKSLE F SPD Q +AF G +GYI+LV KSKQ G KMNGT RS++F+ DGQ LL++GGD VY WDLR+ C+ + +EG ++AL S G A G++SGVVN+Y + LG + P K + +LT VD + FNHD Q+LA+ S + +L+++HVPS TV++NWP T + YP + FSP G +AVGN G+VLLY+L HY A Sbjct: 6 QNARPKIETKREDDVQEKEVEDGKEGDVDTLEVKKRKRDGKGEQLATEQVKEMKRLENFLFGSLYSPLEFGKGDNNEVEAETDAKASDLFFTDRSADSVISVYQEDADFSDGSCDDDDALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENVISGSEYVSRLRAQHVKLNR-GTDWAQLD------------------SGSKIDDSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKS-----SSKLLPGHIEYSRLVDANIQDPSNGPINSVQFH-RNGQLLLATGLDKKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLP-----DGSQVILSGRRKFFYSLDLVKARVDKIGPLLGREEKSLEFFEVSPDSQMIAFVGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAGGDGHVYHWDLRTRTCMHKGVDEGCINSTALCTSPLGTHFAAGSDSGVVNIYNREEFLGGKRK---------------PIKTIDNLTAKVDFMKFNHDSQILAICSSMKKSSLKLIHVPSYTVFSNWPAPNTSLHYPRCIDFSPGGGFMAVGNASGKVLLYKLHHYHHA 556
BLAST of NO13G02240 vs. NCBI_GenBank
Match: GAQ90665.1 (WD40 repeat protein [Klebsormidium nitens]) HSP 1 Score: 352.4 bits (903), Expect = 2.700e-93 Identity = 220/559 (39.36%), Postives = 314/559 (56.17%), Query Frame = 0 Query: 68 PKQLKRQKKQGEMQRRRQGKITEADKDEEECMLERLVFGARDTAV-LFNDQE----------AAFQDDRCLGCRAVA----KFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHR-RRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAG-MTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 P + +R+ K + + ++ E LE+ +FG + F +E F+D R G + A + PAW DD+DE V VNIA +RLRKLR + +E ++GA Y ERLR + + ++ +WA L RG+ R +G W EEEG+ E G+ + R LV+ + KL LE R RDAN +EP+K +V++V FHP+ LL TAGLDKT+RFF VDGK+N +V +F D+P+ A F G+ +VV +GRR +FY D S R+ ++GREEKSLE F SP G AF G +G++ LV SKQW G KMNG+AR+ +++ DG LL SGGD +Y WD+R+ RC+ R +EG +SAL S G A G++SGVVN+Y + + V+ E ST+ P K + +LTT D++ FN DGQ+LA+AS+ +D+LR+VH+PS TV+ NWPT ++P+++ +L FSP G +AVGN +G+VLLYRL HY+ A Sbjct: 8 PAKRRRKGKNAPPEEKEAERLXXXXXXXEAAHLEKELFGGTEEDFDAFGQEERVEETPVEGVLGFEDRR--GAKGDADEDERAGPRPAWVDDEDEEVTVNIARVNRLRKLRAEEEEVVLTGAQYAERLRTQHVKLNR-GTEWAKLE----------TRGKRRLLHEGGW-----EEEGEEEERGE----------ILREAGDLVVRS-----RTKLPQTVLEATRMRDANQEEPTKGVVRSVCFHPN-AQLLLTAGLDKTVRFFNVDGKKNPRVQSLFLEDMPVAKAGF-----TGDGRKVVAAGRRKWFYVVDLASARVERIGGIVGREEKSLESFALSPLGDQAAFLGNEGHVSLVSLHSKQWIGTLKMNGSARAAAYAPDGNTLLTSGGDGEIYHWDVRTRRCMYRTRDEGCVKSSALDVSSDGRYFATGSDSGVVNVYNRARL--GVDDEPVNEPRGLFSTSPSPLKTVMNLTTVADTVRFNPDGQILAIASRMKKDSLRLVHLPSGTVFQNWPTARSPLQFVHSLDFSPGGGFMAVGNAKGKVLLYRLHHYEHA 525
BLAST of NO13G02240 vs. NCBI_GenBank
Match: XP_020572561.1 (U3 small nucleolar RNA-associated protein 18 homolog isoform X2 [Phalaenopsis equestris]) HSP 1 Score: 352.4 bits (903), Expect = 2.700e-93 Identity = 220/570 (38.60%), Postives = 323/570 (56.67%), Query Frame = 0 Query: 59 EQEEEGNVVPKQLKRQKKQGEMQRRRQGKITEADKDEEECM-LERLVFGARDTAVLFNDQEAAFQD--------DRCLGCRAVA---------KFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAG-MTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 E ++ + LKR KK+G + G+ + +++E+E LE +FG+ ++++ F + + D D+ G V K R PAW D++DE + V+I S RL LR++ EK ISGA+Y RLRA+ ++ + PRT D AE NR R+ + + D+ +E D + G+ RS LV + KL P LE R +AN +EPS + +VQFH G LLFTAGLD+ LRFFQ+DGKRN V +F D PI +ASF+ QV+++GRR FFY +D V ++ L GR+EKSLE F SPD +AF G +GYI+L+ +K+K+ G KMNGT RS++F DG+ L++ GGD +Y WDLRS RC+ + +EG T++L+AS G + A G+ SG+VN+Y+ D +G ++ P K++ ++TTTV+ L FNHD Q+LA+ S +D+L++VH+PS TV++NWP +T ++YP + FSP G +AVGN G+VLLY+L HY A Sbjct: 14 ESKDAADAEDSLLKRSKKRGRAD-DKHGRTSGMEQEEKEIKELESFLFGSLNSSIQFGKEIGSGNDEGPLNFFLDKSSGDDMVVYKEDINQYDKEERKPAWVDEEDEVMEVDIVSVRRLXXLRKEAGEKLISGAEYVSRLRAQHEKLN---------PRT---DWAEFNRKRN---------EILASDDDSNDESGITTGDAEGDGVLRSNYELV-----EKSSVKLLPGLLEYSRLMNANSEEPSNGPINSVQFH-RNGKLLFTAGLDRRLRFFQIDGKRNTLVQSIFLEDCPIRNASFLPNG-----SQVILAGRRKFFYVFDLVKAVVDKIGPLTGRDEKSLELFEVSPDSSTIAFAGNEGYILLISSKTKELIGTLKMNGTVRSLAFVEDGRQLISGGGDGDIYHWDLRSRRCIHKGVDEGCITTTSLSASPDGRLFAAGSSSGIVNIYKGDDFIGGKKK---------------PLKSIENMTTTVNFLKFNHDAQILAICSNMKKDSLKLVHIPSFTVFSNWPP-RTGLQYPRCMDFSPGGGFMAVGNAAGKVLLYKLNHYRNA 534
BLAST of NO13G02240 vs. NCBI_GenBank
Match: XP_020572559.1 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 [Phalaenopsis equestris] >XP_020572560.1 U3 small nucleolar RNA-associated protein 18 homolog isoform X1 [Phalaenopsis equestris]) HSP 1 Score: 352.4 bits (903), Expect = 2.700e-93 Identity = 220/570 (38.60%), Postives = 323/570 (56.67%), Query Frame = 0 Query: 59 EQEEEGNVVPKQLKRQKKQGEMQRRRQGKITEADKDEEECM-LERLVFGARDTAVLFNDQEAAFQD--------DRCLGCRAVA---------KFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASLAG-MTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 E ++ + LKR KK+G + G+ + +++E+E LE +FG+ ++++ F + + D D+ G V K R PAW D++DE + V+I S RL LR++ EK ISGA+Y RLRA+ ++ + PRT D AE NR R+ + + D+ +E D + G+ RS LV + KL P LE R +AN +EPS + +VQFH G LLFTAGLD+ LRFFQ+DGKRN V +F D PI +ASF+ QV+++GRR FFY +D V ++ L GR+EKSLE F SPD +AF G +GYI+L+ +K+K+ G KMNGT RS++F DG+ L++ GGD +Y WDLRS RC+ + +EG T++L+AS G + A G+ SG+VN+Y+ D +G ++ P K++ ++TTTV+ L FNHD Q+LA+ S +D+L++VH+PS TV++NWP +T ++YP + FSP G +AVGN G+VLLY+L HY A Sbjct: 22 ESKDAADAEDSLLKRSKKRGRAD-DKHGRTSGMEQEEKEIKELESFLFGSLNSSIQFGKEIGSGNDEGPLNFFLDKSSGDDMVVYKEDINQYDKEERKPAWVDEEDEVMEVDIVSVRRLXXLRKEAGEKLISGAEYVSRLRAQHEKLN---------PRT---DWAEFNRKRN---------EILASDDDSNDESGITTGDAEGDGVLRSNYELV-----EKSSVKLLPGLLEYSRLMNANSEEPSNGPINSVQFH-RNGKLLFTAGLDRRLRFFQIDGKRNTLVQSIFLEDCPIRNASFLPNG-----SQVILAGRRKFFYVFDLVKAVVDKIGPLTGRDEKSLELFEVSPDSSTIAFAGNEGYILLISSKTKELIGTLKMNGTVRSLAFVEDGRQLISGGGDGDIYHWDLRSRRCIHKGVDEGCITTTSLSASPDGRLFAAGSSSGIVNIYKGDDFIGGKKK---------------PLKSIENMTTTVNFLKFNHDAQILAICSNMKKDSLKLVHIPSFTVFSNWPP-RTGLQYPRCMDFSPGGGFMAVGNAAGKVLLYKLNHYRNA 542
BLAST of NO13G02240 vs. NCBI_GenBank
Match: OAE34627.1 (hypothetical protein AXG93_167s1380 [Marchantia polymorpha subsp. ruderalis] >PTQ38452.1 hypothetical protein MARPO_0051s0055 [Marchantia polymorpha]) HSP 1 Score: 351.3 bits (900), Expect = 6.100e-93 Identity = 208/521 (39.92%), Postives = 297/521 (57.01%), Query Frame = 0 Query: 95 EEECMLERLVFG--ARDTAVLFNDQEAA---FQDDRCLGCRAVAKFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRSTRCLARFHNEGGTVTSALAASL-AGMTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHYDRA 610 E+ LE ++FG AR+T V ND A F R + V K + P W D+D+E + ++ +RLRKLR++ +E+ +SG DY RLRA+ ++ WA LP R + W ++ EEG G E D E ++ ++ LV+ + + +L LE+ RD N +EPS A++Q+VQFH +L TAG DK LR FQ+DGKRN K+ +F D PI A+FV + +VV S RR ++ YD G +++ L+GR EKSLE F SPD + +AF G DGYI+L +KQW KMNG+ RS+SF+ +G HLL++GGD +Y WDLR+ RC + +EG +S+LA S + + A G+ SGVVN+Y +G R P K+L +L TT D+L FN+D Q+LA+ S+ ++AL++VH+PS T+++NWP+ QTP+ Y +L FSP G LAVGN GRVLLYRL+HY A Sbjct: 27 EQAAKLESILFGKSARETDV-GNDLNGAVDIFSSSREVA--VVEKVGKKPVWLDEDEEKTVIRVSGINRLRKLRKEQEEEHVSGGDYVSRLRAQHTVLNR-GTSWAELP---------SERTIRKEELPGWGSESDTEEG--GREEDNGELVNEEHQTLLDSSDLVVKS-----SSRLPHGVLEITAMRDGNSEEPSNAVIQSVQFH-RNAQILMTAGFDKRLRLFQIDGKRNPKLQSIFLEDFPIHKAAFVP-----DGSKVVASSRRKHYFVYDMEGGQVQKINPLMGRTEKSLESFEVSPDNKQIAFLGNDGYILLSSLATKQWVANLKMNGSVRSVSFAENGNHLLSTGGDGEIYHWDLRTRRCFHKGTDEGCVKSSSLAVSSDSKLFATGSGSGVVNVYNREAFIGGATR---------------PVKSLMNLVTTADNLKFNNDSQILAIVSRMKKNALKLVHLPSYTIFSNWPSQQTPLHYVHSLDFSPGGGYLAVGNAVGRVLLYRLRHYANA 506
BLAST of NO13G02240 vs. NCBI_GenBank
Match: GAX18594.1 (U3 small nucleolar RNA-associated protein 18 [Fistulifera solaris]) HSP 1 Score: 348.2 bits (892), Expect = 5.200e-92 Identity = 220/533 (41.28%), Postives = 301/533 (56.47%), Query Frame = 0 Query: 78 GEMQRRRQGKITEADKDEEECMLERLVFGARDTAVLFNDQEAAFQDDRCLGCRAVAKFARAPAWQDDDDEAVRVNIASKDRLRKLRRQPDEKDISGADYQERLRARFQESSKMALDWATLPRTPADDAAEGNRGRHRRRQGEWRGDTSEEEGDNGEEGDKQEYDDDFGGLFRSTAPLVLGAGGNGGNEKLQPETLEVVRCRDANMQEPSKAMVQAVQFHPSTG---GLLFTAGLDKTLRFFQVDGKRNEKVAGVFFPDLPILSASFVDPSRAGEFEQVVVSGRRPFFYWYDTVSGTAVRVHRLIGREEKSLERFVASPDGQWLAFTGKDGYIILVGAKSKQWAGEFKMNGTARSMSFSADGQHLLASGGDAVVYRWDLRST-RCLARFHNEGGTVTSALAASLAGMTAVGAESGVVNLYEDSDVLGRVEREGGLALARHASTALPPTKALTHLTTTVDSLAFNHDGQLLAMASKWDRDALRVVHVPSRTVYANWPTGQTPVRYPSALAFSPNSGMLAVGNDRGRVLLYRLKHY 607 GE+ R Q I + +++R + T L N ++ +DD A+ P WQDDDD+ + I K+RL KLR E +S + RLR +Q+S +WA LP EE D EE + D D +L GG L+P L VRC DANM +P++A VQAV FHP + LL TAGLDKTLRFFQV +++EK+ G+ FP LPI SASF+ GE VVV+GRRPFFY Y+ VSG V R++GREEKS E+ VASPDG +A G DGY++L SKQ K+NG+ R+++F+ D + +LASG D VYRWDLR+T RC R+ N+ GT+TSALAAS + AVGAESGVVNLY+ S ++ K++ +L+T+ D + FN DG++LA++++ ++ L+++HVPS TV++NWPT +TP+ Y +L FSP S LA+GND+G+ LLY+LKHY Sbjct: 37 GEVLERSQEIIQSKPAGDSLFVIDR-QGETQTTTELKNVRDLEIEDDN------DAEETDGPVWQDDDDD---IQIHLKNRLAKLRHNRQEGAVSTQQLEGRLRTYYQQSLTAQTNWAKLP----------------------------EENDQTEE-EHAVVDTD---------EPMLSIGG------LKPTILATVRCPDANMADPNQAAVQAVHFHPGSDPDRPLLLTAGLDKTLRFFQVGEEKSEKIHGIHFPKLPIFSASFL-----GETGSVVVTGRRPFFYIYNAVSGNLDHVPRILGREEKSWEKSVASPDGSTVALIGNDGYVVLWDVASKQINKTLKINGSVRAITFTPDNREILASGSDGDVYRWDLRNTRRCAERWSNQDGTITSALAAS-SRHVAVGAESGVVNLYKSSHLV----------------------KSVLNLSTSADLVKFNSDGEILALSTRREKMGLKLLHVPSATVFSNWPTSKTPLNYVWSLDFSPASRFLAIGNDKGKCLLYQLKHY 487 The following BLAST results are available for this feature:
BLAST of NO13G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02240 ID=NO13G02240|Name=NO13G02240|organism=Nannochloropsis oceanica|type=gene|length=1830bpback to top protein sequence of NO13G02240.1 >NO13G02240.1-protein ID=NO13G02240.1-protein|Name=NO13G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=610bpback to top Synonyms
Publications
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