NO13G01990, NO13G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01990 vs. NCBI_GenBank
Match: EWM21863.1 (gtp-binding protein obg [Nannochloropsis gaditana]) HSP 1 Score: 514.6 bits (1324), Expect = 3.300e-142 Identity = 288/485 (59.38%), Postives = 334/485 (68.87%), Query Frame = 0 Query: 1 MDRHHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYYERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFRAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVDARKDAGDVEGVMTRDWKVPPILWGSACTGERIGELAHELRRAVELVALEEENVRGINGPGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHLPQMGEIMVAVG---TTEETASLQRVEED-AAYAEGMCIAHAYSKALEESQARNTEWISGIQGVSAAVIRARRYAAGLAVTYRQNYWLTDAIHSAMQVQQPK 482 MDRHHFHGK GG+GDS + GARG H VVRVPCGT+VKEVLR G YERVQVCDLD+PLSYY AATGG+PGLGNS+QAGR R +++ASGNFR+PGHQGEER+YELELKTIADVGLVGYPNAGKSTLLGGLS A+P AAY FTTLHPTVGRVEYTDAAS+TVADLPGLIEGAHANKGLGHEFLRHIERTKVL+YVLDG+G EG AGV+DGSVVEEAP V RKLK+ELELYCPGLSRRPSLVWLNKADLN++WV EAK+AV A + D+ D + G E M + +VP +L GSA TGE IGELAHELRR V+ VA XXXXX LP + VG TT+ S + D AA + + +A AY+KALE +Q N EW++ +Q + + RA+ Y+A L VTYRQ+YWL + +Q + Sbjct: 312 MDRHHFHGKAGGSGDSNKKHGARGAHAVVRVPCGTVVKEVLR----SGRGGGYERVQVCDLDQPLSYYRAATGGRPGLGNSVQAGRARNSASASGNFRSPGHQGEERFYELELKTIADVGLVGYPNAGKSTLLGGLSRARPAAAAYAFTTLHPTVGRVEYTDAASVTVADLPGLIEGAHANKGLGHEFLRHIERTKVLVYVLDGVGREG---GAGVDDGSVVEEAPVTVFRKLKKELELYCPGLSRRPSLVWLNKADLNAEWVSEAKAAVMADMSGDDATADRPQAWG--ESTMGQRGRVPNVLSGSARTGEGIGELAHELRRVVDRVAQXXXXXXXXXXXXXXXXXXXXKLWARETGGSDHA--------------------LPHRQGGIEGVGGRNTTKSEGSFVTADVDSAADDKTISLAEAYAKALELTQRFNVEWMNAVQCANQNIHRAQCYSAALTVTYRQDYWLAHGMRMMKAGEQTR 767
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_005855655.1 (gtp-binding protein obg [Nannochloropsis gaditana CCMP526] >EKU20703.1 gtp-binding protein obg [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 491.9 bits (1265), Expect = 2.300e-135 Identity = 248/329 (75.38%), Postives = 275/329 (83.59%), Query Frame = 0 Query: 1 MDRHHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYYERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFRAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVDARKDAGDVEGVMTRDWKVPPILWGSACTGERIGELAHELRRAVELVA 330 MDRHHFHGK GG+GDS + GARG H VVRVPCGT+VKEVLR G YERVQVCDLD+PLSYY AATGG+PGLGNS+QAGR R +++ASGNFR+PGHQGEER+YELELKTIADVGLVGYPNAGKSTLLGGLS A+P AAYPFTTLHPTVGRVEYTDAAS+TVADLPGLIEGAHANKGLGHEFLRHIERTKVL+YVLDG+G EG AGV+DGSVVEEAP V RKLK+ELELYCPGLSRRPSLVWLNKADLN++WV EAK+AV A + D+ D + G E M + +VP +L GSA TGE IGELAHELRR V+ VA Sbjct: 241 MDRHHFHGKAGGSGDSNKKHGARGAHAVVRVPCGTVVKEVLR----SGRGGGYERVQVCDLDQPLSYYRAATGGRPGLGNSVQAGRARNSASASGNFRSPGHQGEERFYELELKTIADVGLVGYPNAGKSTLLGGLSRARPAAAAYPFTTLHPTVGRVEYTDAASVTVADLPGLIEGAHANKGLGHEFLRHIERTKVLVYVLDGVGREG---GAGVDDGSVVEEAPVTVFRKLKKELELYCPGLSRRPSLVWLNKADLNAEWVSEAKAAVMADMSGDDATADRPQAWG--ESTMGQRGRVPNVLSGSARTGEGIGELAHELRRVVDRVA 560
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_009515404.1 (hypothetical protein PHYSODRAFT_470774 [Phytophthora sojae] >EGZ28129.1 hypothetical protein PHYSODRAFT_470774 [Phytophthora sojae]) HSP 1 Score: 264.2 bits (674), Expect = 7.900e-67 Identity = 142/260 (54.62%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYY---ERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H VV+VPCGT+VK V R NG Y + VCDLD+P + + AA GGKPGLGN I AG+ K + + GH G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 132 HHFKGGAGTNGMPNDAAGRRGKHCVVKVPCGTLVKRVERYERELENGEYEIVDQMETVCDLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPENKTTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 377
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_008911618.1 (obg family GTPase CgtA [Phytophthora parasitica INRA-310] >ETI37585.1 obg family GTPase CgtA [Phytophthora parasitica P1569] >ETK77828.1 obg family GTPase CgtA [Phytophthora parasitica] >ETL84514.1 obg family GTPase CgtA [Phytophthora parasitica] >ETN03074.1 obg family GTPase CgtA [Phytophthora parasitica INRA-310] >ETP07450.1 obg family GTPase CgtA [Phytophthora parasitica CJ01A1] >ETP35525.1 obg family GTPase CgtA [Phytophthora parasitica P10297] >KUF91580.1 GTPase [Phytophthora nicotianae]) HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63 Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R +G Y +R++ V DLD+P + + AA GGKPGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETL31261.1 (obg family GTPase CgtA [Phytophthora parasitica]) HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63 Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R +G Y +R++ V DLD+P + + AA GGKPGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETM37697.1 (obg family GTPase CgtA [Phytophthora parasitica]) HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63 Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R +G Y +R++ V DLD+P + + AA GGKPGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_024585322.1 (obg family gtpase [Plasmopara halstedii] >CEG48953.1 obg family gtpase [Plasmopara halstedii]) HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63 Identity = 147/289 (50.87%), Postives = 174/289 (60.21%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFR-------APGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVD 283 HHF G+ G G + G RG++ V+VPCGT+VK V R G Y +R++ V DLD+P + + AA GGKPGLGN I AG+ K SG R G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P +A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Q AV V V++D Sbjct: 143 HHFKGESGTNGMPNDSAGKRGKYCYVKVPCGTLVKRVERYEREMDTGEYEVVDRMEVVADLDKPGTTFLAAKGGKPGLGNRILAGKTTK----SGRLRKLMPENKTRGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPAIAPYPFTTLHPYVGIVEFPDTYRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLVDFNHLQRELELYAPGISSRPSLIVANKMDEQGKLRQSTDLAVLPVSALHRVDID 413
BLAST of NO13G01990 vs. NCBI_GenBank
Match: OWZ23559.1 (Obg family GTPase [Phytophthora megakarya]) HSP 1 Score: 253.4 bits (646), Expect = 1.400e-63 Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R NG Y +++Q V DLD+P + + AA GG+PGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 152 HHFKGGAGTNGMPNDAAGRRGKHCHVKVPCGTLVKRVERYERELENGEYEIVDQMQVVADLDKPGASFLAAKGGRPGLGNRILAGKTTKFGRLRKHMPENKTVGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTYRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 397
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETO66380.1 (obg family GTPase CgtA [Phytophthora parasitica P1976]) HSP 1 Score: 252.7 bits (644), Expect = 2.400e-63 Identity = 138/260 (53.08%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R +G Y ++++ V DLD+P + + AA GGKPGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDKMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_002906367.1 (GTPase [Phytophthora infestans T30-4] >EEY65768.1 GTPase [Phytophthora infestans T30-4]) HSP 1 Score: 251.9 bits (642), Expect = 4.000e-63 Identity = 138/260 (53.08%), Postives = 165/260 (63.46%), Query Frame = 0 Query: 4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258 HHF G G G + G RG+H V+VPCGT+VK V R +G Y +R++ V DLD P + + AA GGKPGLGN I AG+ K + + G G +YYELELKTIADVGLVGYPNAGKSTLL LS A P++A YPFTTLHP VG VE+ D L++AD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD G EGR P L+ ELELY PG+S RPSL+ NK D Sbjct: 132 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDTPGAAFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSMADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 377 The following BLAST results are available for this feature:
BLAST of NO13G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01990 ID=NO13G01990|Name=NO13G01990|organism=Nannochloropsis oceanica|type=gene|length=1470bpback to top protein sequence of NO13G01990.1 >NO13G01990.1-protein ID=NO13G01990.1-protein|Name=NO13G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bpback to top Synonyms
Publications
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