NO13G01830, NO13G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01830 vs. NCBI_GenBank
Match: EWM21824.1 (superoxide dismutase [Nannochloropsis gaditana]) HSP 1 Score: 430.6 bits (1106), Expect = 3.100e-117 Identity = 207/235 (88.09%), Postives = 218/235 (92.77%), Query Frame = 0 Query: 1 MKTYCVVLGAASLAVASHAFLMGNPLKAAPKAAACSSTTCMAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MKTYC V GA SLAVASHAF++G+PL KA A SST MAV LP LP+ DTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNC+KPNGGG PTGK+AALIDRDLGG+EAFRKQFAADSNGNFGSGWTWLAM GDKL+IVKTSNAD+P+T GMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVN+NLA Sbjct: 1 MKTYCAVFGAVSLAVASHAFMVGSPLTGVSKAPASSSTVRMAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_022699814.1 (superoxide dismutase [Oceanicaulis alexandrii]) HSP 1 Score: 265.8 bits (678), Expect = 1.300e-67 Identity = 122/196 (62.24%), Postives = 143/196 (72.96%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAA-KGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA TLP LPYA AL P IS TL HHGKHH YV N+ +KGTDLE+ SLEE++K + KN G+FNNAAQ+WNH FYW+ +KPNGGG PTG IA ID+ G Y+ F ++F A G FGSGW WL GDKL++ KT NA+ PITDG+TPLL +DVWEHAYYLD QN R Y+ +FLDKLVNWDF N NLA Sbjct: 1 MAFTLPDLPYAQDALAPHISAETLSFHHGKHHKAYVDKANDAVKGTDLESLSLEELIKKSWADKNMGVFNNAAQIWNHTFYWHSMKPNGGGKPTGAIADAIDKSFGSYDKFAEEFKAAGAGQFGSGWAWLVKNGDKLEVRKTLNAENPITDGVTPLLTMDVWEHAYYLDYQNRRPDYIGDFLDKLVNWDFANQNLA 196
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_035582187.1 (superoxide dismutase [Hyphomonas jannaschiana] >KCZ88159.1 superoxide dismutase, Fe [Hyphomonas jannaschiana VP2]) HSP 1 Score: 265.4 bits (677), Expect = 1.700e-67 Identity = 128/198 (64.65%), Postives = 144/198 (72.73%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVK--AAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPIT-DGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA TLP LPY AL P IS++TL+ HHGKHH YVT N +I+GTDLE SLE+I+K AA GLFNNAAQVWNH FYW+ +KP GGG P GK A LIDRDLGGY+ F K F A G FGSGW WL +KG KL I KT NA+ P+T DG TPLL +DVWEHAYYLD QN R Y+D FL+ LVNWDFVN NLA Sbjct: 1 MAFTLPDLPYGRDALAPHISEQTLNFHHGKHHQAYVTNLNGLIEGTDLEGKSLEDIIKVAAADASKAGLFNNAAQVWNHTFYWHSMKPGGGGKPHGKAAELIDRDLGGYDEFVKAFKAAGGGQFGSGWAWLVLKGGKLAITKTPNAETPLTEDGTTPLLTMDVWEHAYYLDYQNSRPNYMDTFLNSLVNWDFVNQNLA 198
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_035552873.1 (superoxide dismutase [Hyphomonas atlantica] >KCZ59723.1 superoxide dismutase [Hyphomonas atlantica]) HSP 1 Score: 265.0 bits (676), Expect = 2.200e-67 Identity = 125/198 (63.13%), Postives = 145/198 (73.23%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVK--AAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITD-GMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA +LP LPY AL P IS+ TL+ HHGKHHA YV N +I+GTDLEN SLE I+K AA GLFNNAAQVWNH FYW+C+KP+GGG P GK+A LIDRDLGGY+ F K F A G FGSGW WL K KL I KT NA+ P+TD G TP+L +DVWEHAYYLD QN R Y+D+F++ L+NWDFVN NLA Sbjct: 1 MAFSLPDLPYERDALAPHISEETLNFHHGKHHAAYVNNLNGLIEGTDLENESLESIIKTAAADSGKAGLFNNAAQVWNHTFYWHCMKPSGGGKPHGKVAELIDRDLGGYDQFVKDFKAAGGGQFGSGWAWLVYKDGKLHITKTPNAETPVTDMGATPVLTMDVWEHAYYLDYQNSRPNYMDSFINNLINWDFVNQNLA 198
BLAST of NO13G01830 vs. NCBI_GenBank
Match: OFX05334.1 (superoxide dismutase [Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12]) HSP 1 Score: 263.1 bits (671), Expect = 8.400e-67 Identity = 120/193 (62.18%), Postives = 141/193 (73.06%), Query Frame = 0 Query: 43 VTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 + LP LPY AL P IS+ T++ H+GKHH YV N +I+G L ASLEEIV+AAKG +QGLFNNAAQVWNH FYW ++PNGGG P G IAA+IDR GGY+AF +QFA G FGSGW WL GDKL+I KT NA+ P+T+G+TPLL +DVWEHAYYLD QN R Y+ FL LVNWDF N NLA Sbjct: 2 IELPELPYDRKALAPHISENTINFHYGKHHKAYVDKVNSLIEGGKLATASLEEIVRAAKGTDQGLFNNAAQVWNHTFYWRSMRPNGGGAPKGDIAAMIDRSFGGYDAFSRQFADAGAGQFGSGWAWLVKAGDKLEIRKTPNAETPLTEGVTPLLTMDVWEHAYYLDYQNQRPTYIGKFLSDLVNWDFANENLA 194
BLAST of NO13G01830 vs. NCBI_GenBank
Match: PHM18232.1 (superoxide dismutase [Fe] [Sulfuricurvum sp. PD_MW2]) HSP 1 Score: 261.9 bits (668), Expect = 1.900e-66 Identity = 122/196 (62.24%), Postives = 147/196 (75.00%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAA--KGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNL 235 MA+ LP LP++ ALEP IS +TLD H+GKHH Y+ TN +IK TDLENASLEEI+K + GLFNNAAQVWNH FYW+ L P GGG P+GKIAA+I++D G Y+ F K+F + G FGSGW WLA+ KL I KTSNAD PI GMTPLL IDVWEHAYYLD +NVRA+YVDN +++L+NW+F N NL Sbjct: 1 MAIELPLLPFSKNALEPYISSQTLDYHYGKHHNTYIINTNNLIKDTDLENASLEEIIKTSFNNAAQTGLFNNAAQVWNHTFYWHSLSPTGGGAPSGKIAAMINQDFGSYDDFAKRFKEAALGQFGSGWAWLAVVEGKLAIHKTSNADTPIVHGMTPLLCIDVWEHAYYLDYKNVRAEYVDNVINRLLNWEFANRNL 196
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_107712907.1 (superoxide dismutase [Oceanicaulis sp. PT13A] >PTM73220.1 Fe-Mn family superoxide dismutase [Oceanicaulis sp. PT13A]) HSP 1 Score: 261.5 bits (667), Expect = 2.500e-66 Identity = 120/196 (61.22%), Postives = 142/196 (72.45%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAA-KGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA TLP LPYA AL P IS TL HHGKHH YV N+ +KGTDLE+ +LEE++K + KN G+FNNAAQ+WNH FYW+ +KPNGGG PTG IA ID+ G Y+ F ++F A G FGSGW WL GD L++ KT NA+ PITDG+TPLL +DVWEHAYYLD QN R Y+ +FLDKLVNWDF N NLA Sbjct: 1 MAFTLPDLPYAQDALAPHISAETLSFHHGKHHKAYVDKANDAVKGTDLESLNLEELIKKSWADKNMGVFNNAAQIWNHTFYWHSMKPNGGGKPTGAIADAIDKSFGSYDKFVEEFKAAGAGQFGSGWAWLVKNGDTLEVRKTLNAENPITDGVTPLLTMDVWEHAYYLDYQNRRPDYIGDFLDKLVNWDFANQNLA 196
BLAST of NO13G01830 vs. NCBI_GenBank
Match: OUX84375.1 (superoxide dismutase [Fe] [Hyphomonas sp. TMED31]) HSP 1 Score: 260.8 bits (665), Expect = 4.200e-66 Identity = 123/198 (62.12%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVK--AAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITD-GMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA +LP LPY AL P IS+ TL+ HHGKHHA YV N + +GTDLEN SLE I+K AA GLFNNAA VWNH FYW+C+KP+GGG P GK+A LIDRDLGGY+ F K F A G FGSGW WL K KL I KT NA+ P+TD G TP+L +DVWEHAYYLD QN R Y+D+F++ L+NWDFVN NLA Sbjct: 1 MAFSLPDLPYERDALAPHISEETLNFHHGKHHAAYVNNLNGLXEGTDLENESLESIIKTAAADSGKAGLFNNAAXVWNHTFYWHCMKPSGGGKPHGKVAELIDRDLGGYDQFVKDFKAAGGGQFGSGWAWLVYKDGKLHITKTPNAETPVTDMGATPVLTMDVWEHAYYLDYQNSRPNYMDSFINNLINWDFVNQNLA 198
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_009801240.1 (superoxide dismutase [Oceanicaulis sp. HTCC2633] >EAP91345.1 superoxide dismutase [Oceanicaulis sp. HTCC2633]) HSP 1 Score: 260.8 bits (665), Expect = 4.200e-66 Identity = 121/196 (61.73%), Postives = 138/196 (70.41%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAA-KGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPITDGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA TLP LPYA AL P IS TL HHGKHH YV N+ IKGTD E SLEE++K + KN G+FNNAAQ+WNH FYWN + PNGGG PTG IA ID+ G Y+ F ++F A G FGSGW WL GDKL++ KT NA+ PITDG TPLL +DVWEHAYYLD QN R Y+ +FL KLVNWDF N NLA Sbjct: 1 MAFTLPDLPYAQDALAPHISGETLSFHHGKHHKAYVDKANDAIKGTDYEGLSLEEVIKKSWSEKNMGVFNNAAQIWNHTFYWNSMSPNGGGKPTGAIAEAIDKSFGSYDKFAEEFKAAGAGQFGSGWAWLVKNGDKLEVRKTLNAENPITDGATPLLTMDVWEHAYYLDYQNRRPDYIGDFLGKLVNWDFANQNLA 196
BLAST of NO13G01830 vs. NCBI_GenBank
Match: WP_034765907.1 (MULTISPECIES: superoxide dismutase [Hyphomonas] >KCZ47608.1 superoxide dismutase [Hyphomonas sp. CY54-11-8]) HSP 1 Score: 259.2 bits (661), Expect = 1.200e-65 Identity = 126/198 (63.64%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 41 MAVTLPALPYADTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVK--AAKGKNQGLFNNAAQVWNHNFYWNCLKPNGGGVPTGKIAALIDRDLGGYEAFRKQFAADSNGNFGSGWTWLAMKGDKLQIVKTSNADVPIT-DGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNSNLA 236 MA TLP LPY AL P IS++TL+ H+GKHH YVT N +I+GTDLE+ SLEEIVK AA G+FNNAAQVWNH FYW+ +KP GGG P GK A LIDRDLGGY+ F K F A G FGSGW WL +K KL I KT NA+ P+T +G TPLL +DVWEHAYYLD QN R Y+D FL LVNWDFVN NLA Sbjct: 1 MAFTLPDLPYGRDALAPHISEQTLNFHYGKHHQAYVTNLNGLIEGTDLESKSLEEIVKIAAADASKAGMFNNAAQVWNHTFYWHSMKPGGGGKPHGKAAELIDRDLGGYDEFVKAFKAAGGGQFGSGWAWLVLKDGKLAITKTPNAETPLTEEGTTPLLTMDVWEHAYYLDYQNSRPNYMDTFLTSLVNWDFVNQNLA 198 The following BLAST results are available for this feature:
BLAST of NO13G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01830 ID=NO13G01830|Name=NO13G01830|organism=Nannochloropsis oceanica|type=gene|length=1890bpback to top protein sequence of NO13G01830.1 >NO13G01830.1-protein ID=NO13G01830.1-protein|Name=NO13G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bpback to top Synonyms
Publications
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