NO13G01600, NO13G01600 (gene) Nannochloropsis oceanica

Overview
NameNO13G01600
Unique NameNO13G01600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length510
Alignment locationchr13:471648..472157 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:471648..472157 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01600.1NO13G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01600.1NO13G01600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01600 ID=NO13G01600|Name=NO13G01600|organism=Nannochloropsis oceanica|type=gene|length=510bp
ATGCTGCTGGGGGGCACGGTGGAAAAGGACGTGGATGCAGCATGCAGTGA
CAAAGCCAGCGACCGTTCTTCCTTCTTCTTTCTTCCGCGAGAGACGCACC
CGGGCCCCGGCGAGAAATCAAGCCTGAGAGGGCTCGCACTTGgtaatgcc
tccttcttgaccgttatcctatcgtcacacaagctcatcgcttttcttcc
acatttatgcacagTTTCTGCTTGCACGGGCACGTTTTATTTCCTCGTCC
TGGgtcagtccctcctgcgagcaacggcaaccttgtcatctcgccgctcg
atcatcaatagcggcggccctcatctggctgtcaagccaagcaaagagca
cctttgctccatggaggcggtggtggtggtgacggtggtcctgtgccatt
cctccttgttgtgagTGGCGGGTAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTCTTGCGTGTTATCTCAC
CGACGGCTAA
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protein sequence of NO13G01600.1

>NO13G01600.1-protein ID=NO13G01600.1-protein|Name=NO13G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=92bp
MLLGGTVEKDVDAACSDKASDRSSFFFLPRETHPGPGEKSSLRGLALVSA
CTGTFYFLVLVAGSSSSSSSSSSSSSSSSSSSGLACYLTDG*
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Synonyms
Publications