NO13G00270, NO13G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00270 vs. NCBI_GenBank
Match: EWM22868.1 (phosphatidate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 349.7 bits (896), Expect = 9.200e-93 Identity = 189/300 (63.00%), Postives = 209/300 (69.67%), Query Frame = 0 Query: 18 TASSFFTAKTLANPHAHDTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHLTAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRG------VGERVWGATLLSAAAETLPVPEGWDNVVVFVAVVLADWLVMRG 312 T SSF TAK L +HD RALLLTSLAMVSY+EGVKLLA R ICASTTARK MH+GCGPIFLLCWPLFS AS FA APLALTSFFT+VGLGI N ATV+SMSRTGARQELLRGP YGSVMI+ATL++WR LTAALCISCLCAGDGFAD++GR+ AP + P GRIPWC SKSW+GT+GFI AS TS C Y GW + + GR G V RVWG+TLLSAAAETLPVPEGWDN++VF A +LADWLVMRG Sbjct: 17 TVSSFLTAKVLPG-SSHDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAP------------------AVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGW-TIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMVFGAALLADWLVMRG 296
BLAST of NO13G00270 vs. NCBI_GenBank
Match: XP_004344106.1 (phytol kinase 2, putative [Acanthamoeba castellanii str. Neff] >ELR20703.1 phytol kinase 2, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 146.0 bits (367), Expect = 2.000e-31 Identity = 90/260 (34.62%), Postives = 131/260 (50.38%), Query Frame = 0 Query: 42 TSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHLTAALCI-SCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLSAAAETLPVPEGWDNVVVFVA 301 T++ + + + ++ L R + ++ RK++HVG GP+F+LCW F Q + A +A V P +T F L+GLG+ +++ TV+S+SRTG R ELL+GP +YG + +V T VYWR + + I LCAGDGFADL GR+ A R+P RSKSW G+ F AS+ A F GW+ V G + TL+S E+LPV + WDN+ V +A Sbjct: 12 TTVVALLWLKAMETLRDRGVLSANACRKWIHVGTGPLFILCWLAFPQDAQARYWAAVVPGLITLRFALLGLGVLKDEKTVRSLSRTGDRTELLKGPLIYGIIFVVCTCVYWRDSSVGISILLILCAGDGFADLAGRKYGGAA----------------------------------------RLPHNRSKSWAGSCAFFVASLAFQCAYAHLFHAQGWLRV---GLAQSLPTIVAVTLVSTVVESLPVSD-WDNLTVSLA 227
BLAST of NO13G00270 vs. NCBI_GenBank
Match: XP_005770298.1 (hypothetical protein EMIHUDRAFT_436338 [Emiliania huxleyi CCMP1516] >EOD17869.1 hypothetical protein EMIHUDRAFT_436338 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 145.6 bits (366), Expect = 2.600e-31 Identity = 97/278 (34.89%), Postives = 137/278 (49.28%), Query Frame = 0 Query: 27 TLANPHAHDTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHLTAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLSAAAETLPVPEGWDNVVVFVAVVLA 305 T P D A L S M EG+K+LA + +T RK +H+ GP+F+L WP F + ++ +A P +T+ F LVG G+ Q A V+ MSRTG R+ELLRGP LYG+V AT++ +R TA + LCAGDG AD+IGRR G++ ++PW KSW G+ F A++ S + F + GW + A + + A++ +AAAE+LPVPE DNVV + LA Sbjct: 2 TALAPLRSDGVAFLAASATMAVLVEGLKVLAKAGVYPTTFTRKLLHMAAGPVFILTWPWFGKQPSSAVWAAAVPACMTAKFALVGAGLIQQDADVKLMSRTGDRRELLRGPLLYGAVFCAATVLGFRSATAGGALMALCAGDGMADVIGRRF-------------GRR---------------------------HKLPWSPQKSWAGSAAFTASAFAGSMGAVSLFHHWGWSSSA---AADLALPLLAASVAAAAAESLPVPE-IDNVVAPLCFALA 235
BLAST of NO13G00270 vs. NCBI_GenBank
Match: XP_005773265.1 (hypothetical protein EMIHUDRAFT_369009 [Emiliania huxleyi CCMP1516] >EOD20836.1 hypothetical protein EMIHUDRAFT_369009 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 145.2 bits (365), Expect = 3.400e-31 Identity = 95/270 (35.19%), Postives = 135/270 (50.00%), Query Frame = 0 Query: 35 DTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHLTAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLSAAAETLPVPEGWDNVVVFVAVVLA 305 D A L S M EG+K+LA + +T RK +H+ GP+F+L WP F + ++ +A P +T+ F LVG G+ Q A V+ MSRTG R+ELLRGP LYG+V AT++ +R TA + LCAGDG AD+IGRR G++ ++PW KSW G+ F A++ S + F + GW + A + + A++ +AAAE+LPVPE DNVV + LA Sbjct: 9 DGVAFLAASATMAVLVEGLKVLAKAGVYPTTFTRKLLHMAAGPVFILTWPWFGKQPSSAVWAAAVPACMTAKFALVGAGLIQQDADVKLMSRTGDRRELLRGPLLYGAVFCAATVLGFRSATAGGALMALCAGDGMADVIGRRF-------------GRR---------------------------HKLPWSPQKSWAGSAAFTASAFAGSMGAVSLFHHWGWSSSA---AADLALPLLAASVAAAAAESLPVPE-IDNVVAPLCFALA 234
BLAST of NO13G00270 vs. NCBI_GenBank
Match: XP_005850569.1 (hypothetical protein CHLNCDRAFT_140477 [Chlorella variabilis] >EFN58467.1 hypothetical protein CHLNCDRAFT_140477 [Chlorella variabilis]) HSP 1 Score: 128.3 bits (321), Expect = 4.400e-26 Identity = 93/277 (33.57%), Postives = 127/277 (45.85%), Query Frame = 0 Query: 37 RALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHL-TAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLL---------SAAAETLPVPEGWDNVVVFVAVVL 304 RA L T V+Y ++ + + ARK MH+G GP+++LCWPL+S + + A P F LVG GI ++ V SR+G R+ELLRGP LY +V + ATL++WRH L ++ LCAGDG A+++GR C+ A GKK + S +P K+ GTL S L YF HG A A G G WG L+ A AE+LP+ DNV + +AV L Sbjct: 12 RAFLTTLGGAVAYIGVCGVVGRLGLLPTRLARKMMHIGTGPLYMLCWPLYSAAPSSRWLAASVPALAGVQFMLVGTGIVRDDTLVAGASRSGRREELLRGPLLYAAVHVAATLIWWRHSPCGVLALAILCAGDGLAEVVGRACSSAAASADAPARGGKKGSVDSGSTWRRSVLRALARP---------LPHNCDKTVGGTLACWLGGAAASLPLLLYFMRHGMFASAGPAAAG-GVLQWGWPLVRGVLLCSGFGALAESLPLGGEADNVTIALAVGL 278
BLAST of NO13G00270 vs. NCBI_GenBank
Match: WP_075060911.1 (phosphatidate cytidylyltransferase [Ornatilinea apprima] >KPL80982.1 phosphatidate cytidylyltransferase [Ornatilinea apprima]) HSP 1 Score: 127.9 bits (320), Expect = 5.700e-26 Identity = 76/205 (37.07%), Postives = 101/205 (49.27%), Query Frame = 0 Query: 56 LAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWR-HLTAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWI 260 LA R + +RK +H+G GPIF+LCW LF + + A + PLA+T F LVGLG+ ++QA V +MSRTG R+E+LRGP YG V +V TLVYWR L + + LC GDG AD++G+R A IPW R KS GTL A L S + +Q G++ Sbjct: 26 LAHRGFISGPLSRKLIHMGTGPIFVLCWLLFPDTLTSRFLAALIPLAITVQFALVGLGVVKDQAAVDAMSRTGQREEILRGPLFYGIVFVVLTLVYWRDSLIGIVALMLLCGGDGLADIVGKRIKSAA-----------------------------------------IPWARKKSVAGTLAMFAGGWLMSVGVGVVYQASGFL 189
BLAST of NO13G00270 vs. NCBI_GenBank
Match: OGN76041.1 (phosphatidate cytidylyltransferase [Chloroflexi bacterium GWB2_54_36]) HSP 1 Score: 127.1 bits (318), Expect = 9.700e-26 Identity = 89/273 (32.60%), Postives = 130/273 (47.62%), Query Frame = 0 Query: 35 DTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHL-TAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLS---AAAETLPVPEGWDNVVVFVAVVL 304 D AL++T +A + + LA R I +S +RK +H+G GPIF+LCW LF+ + A A + PL +T F +VG+GI +++A V +M+RTG R+ELLRGP YG V +V T+ +W + + LC GDGF D+IG+R A A +PW K+W G+L + + S + F G + + GE V L+S AA E+LPV + + V VAV L Sbjct: 5 DLLALVITLVAALVWLRLNDFLAHRGIISSALSRKIIHIGTGPIFVLCWLLFTSAPSARFVAAIVPLGITLQFFMVGVGIIKDKAAVDAMARTGDRRELLRGPLYYGIVFVVLTVTFWLDSPVGIIALMVLCGGDGFGDVIGKRIASRA-----------------------------------------LPWSPRKTWAGSLAVLVGGFVFSLLVLTVFIQFGVFDLTQ------GELVPRLLLISVVCAAVESLPVRDLDNLTVPLVAVAL 230
BLAST of NO13G00270 vs. NCBI_GenBank
Match: WP_080810670.1 (phosphatidate cytidylyltransferase [Halomicronema hongdechloris] >ASC71251.1 Phytol kinase [Halomicronema hongdechloris C2206]) HSP 1 Score: 127.1 bits (318), Expect = 9.700e-26 Identity = 90/288 (31.25%), Postives = 136/288 (47.22%), Query Frame = 0 Query: 28 LANPHAHDTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHL-TAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLSAAAETL--PVP-EGWDNVVVFVAVVLADWLVMRG 312 +ANP D A L+T + +S+ + + LA R + T +RK +H+G GP+F+LCWPLFS A +A + PL T+ F +GLG + A VQSM+R QE+LRGP YG VM++ T+++WR L + +C GDG AD++GRR W ++P+ KSW G+ ASVL + F G+ + G G+ LL AA TL +P + DN+ + + V++ +V+ G Sbjct: 1 MANPLLQDGLATLVTFVLALSWLKLMDGLAYRGLLQQTLSRKLIHIGTGPLFILCWPLFSDQGGARYWAALVPLTFTAKFLAIGLGWLVDAAAVQSMTRNNQPQEILRGPLYYGVVMVICTVLFWRQSPLGILALMMMCGGDGLADIVGRR-------------------WGRH----------------------KLPFSPEKSWAGSTAMFVASVLFGWGALQLFSALGYGQLG----GGPGQVAIAPLLLIAAVATLVEALPFKDIDNLTLPLTVLVLGQMVLPG 243
BLAST of NO13G00270 vs. NCBI_GenBank
Match: GAQ80394.1 (phosphatidate cytidyltransferase [Klebsormidium nitens]) HSP 1 Score: 126.7 bits (317), Expect = 1.300e-25 Identity = 97/297 (32.66%), Postives = 133/297 (44.78%), Query Frame = 0 Query: 20 SSFFTAKTLANPHAHDTRALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHL-TAALCISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLGFIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLS---AAAETLPVPEGWDNVVVFVAV-VLADWLVMRG 312 S +FT+ T D A + V++ + V + +RK +H+G GPIFLL W LFS + A FA V PL +T+ F L+G+G+ + V SMSR G ELLRGP YG V +V+T+V+WR L +S LC GDG A+++GR+ + ++PW RSKS+VGT S L F YF Y VG LLS AA E LP + DN+ V +AV +L +WL+ G Sbjct: 50 SPYFTSST-----GVDITAASIALFICVAWLKSVDAAVYFNLLDMRLSRKMIHIGTGPIFLLTWNLFSDAPEARYFAAVVPLLVTAQFFLIGVGVINDPQAVASMSRRGDPSELLRGPLYYGIVFVVSTVVFWRSSPLGVLALSVLCGGDGLAEVLGRKYGRV-----------------------------------------KLPWSRSKSYVGTAAMFLGSFLFGFGYLVYFNY----LKNFNPELSVGSTALIVLLLSLAAAAVEALPF-QDVDNITVPLAVIILGNWLLPFG 295
BLAST of NO13G00270 vs. NCBI_GenBank
Match: OIO84437.1 (phosphatidate cytidylyltransferase [Anaerolineae bacterium CG2_30_57_67] >PJB65221.1 phosphatidate cytidylyltransferase [Anaerolineae bacterium CG_4_9_14_3_um_filter_57_17]) HSP 1 Score: 122.9 bits (307), Expect = 1.800e-24 Identity = 87/274 (31.75%), Postives = 136/274 (49.64%), Query Frame = 0 Query: 38 ALLLTSLAMVSYSEGVKLLAARKICASTTARKFMHVGCGPIFLLCWPLFSQSSHASSFAMVAPLALTSFFTLVGLGIAQNQATVQSMSRTGARQELLRGPFLYGSVMIVATLVYWRHLTAAL-CISCLCAGDGFADLIGRRCAPLAIQNVKHDDDGKKLTWQSEPQXXXXXXXXXXXXXXXXXXXGRIPWCRSKSWVGTLG-FIAASVLTSFCLAAYFQYHGWIAVAERGRRGVGERVWGATLLSAAAETLPVPEGWDNVVVFVAVVLADWLVM 310 A L+T A +++ + A R S +RK +H+G GPI++LCW LF + A +A + PLA+T F L+G G+ +++A+VQ+MSR+G +E+LRGP YG + TL++W+ + + +C GDG AD++GRR IQ+ R PW R KS G+L F+ A L+ LA Y + + A R + +LL+AA E+LP + DN+ V +AV +A W ++ Sbjct: 6 ATLVTLTAALAWLRLMDFAAQRGWLESRLSRKIIHIGTGPIYVLCWLLFLPTPDARFWAALVPLAITLQFALIGFGLIKDEASVQAMSRSGDPREILRGPLYYGLAFVALTLIFWKDSPVGMVALMSMCGGDGIADIVGRR-----IQS------------------------------------PRWPWSREKSVAGSLAVFLGAFWLSLVILAVYVALNVFPAPLTRFLLPLA----ALSLLAAAVESLP-HKDVDNLTVTLAVAVAGWFLL 233 The following BLAST results are available for this feature:
BLAST of NO13G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00270 ID=NO13G00270|Name=NO13G00270|organism=Nannochloropsis oceanica|type=gene|length=951bpback to top protein sequence of NO13G00270.1 >NO13G00270.1-protein ID=NO13G00270.1-protein|Name=NO13G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bpback to top Synonyms
Publications
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