NO13G00060, NO13G00060 (gene) Nannochloropsis oceanica

Overview
NameNO13G00060
Unique NameNO13G00060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2589
Alignment locationchr13:15460..18048 -

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Properties
Property NameValue
DescriptionMORN repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:15460..18048 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
Homology
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BLAST of NO13G00060 vs. NCBI_GenBank
Match: EWM22865.1 (MORN repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 369.4 bits (947), Expect = 2.500e-98
Identity = 365/576 (63.37%), Postives = 395/576 (68.58%), Query Frame = 0 
Query:    1 MAIMNNKNALYMGELIDKKRDGQGVCRWEDGNVYDGEWREDKRHGRGKFLIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVAEGDGRFHAAAFAVDRTFPDCKPEDVPALAMKEVRAKLREIQKKPIEPDTPSSTSSFSHYLKHQQSSSTSGGTPRVSGAVQVTKAGGTADNPSSRTGVVLLPSPG----RSSTPINLGLYNT-----------------GKNAARVAATNSAEVASRGQALALGMSPNRDMGRGIVQHQREPTPSSNSSSAIFHTGSPL----------------------------FKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGFARLKEIGLERHLLRDLLVSTLGESREVDRYLGILRPKGLDNLLSLKLQITSTEELKQAGVHRVIHARKLWKALQDVDCSTLLLPPSSHPQLHHFLFTLFEFWSLDDQLLLTYVRLFADRLGLTMHEELVMLTERDLRRLPLLDGHRIALLHVREE 528
            MA + NKNA+YMGELID KRDGQGVCRWEDGNVYDGEWREDKRHGRG F+IG XXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+VA G+GR++A AFA+DRTFP+ K E++PALAMKEV AKLREIQ K      P ++S         QS  +S   P          AG    +PS     V LP         + P  LG  N                                         LGMSP     +G+ Q    PTP   SSSAIFHT SPL                             +                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FARLKEIGLERHLLRDLLV+TLGESREVDRYLG+LRP+GLDNLLSLKL+ITSTEELKQAGVHRVIHARKLWKALQ+VD STLL PP+S PQLHHFLFTLFEFWSLDD LL TYVRLF DRLGL +HEEL++LTE+DLRRLP+LDGHRIALLH REE
Sbjct:    1 MANVTNKNAMYMGELIDNKRDGQGVCRWEDGNVYDGEWREDKRHGRGMFMIGXXXXXXXXXXXXXXXXXXXXXTWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVAGGEGRYYAVAFALDRTFPESKAEEIPALAMKEVNAKLREIQAKSSHDQNPPASS--------YQSPHSSPWAPNPMQNSPAEAAG----HPSPH---VYLPXXXXXXQHIANPNVLGFNNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGMSPT-GAPQGVFQ---IPTP---SSSAIFHTNSPLVHATNAGSGAASNSSDAQYCSPYPTRQALQQHHGPVQPQPPYARPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARLKEIGLERHLLRDLLVATLGESREVDRYLGLLRPRGLDNLLSLKLRITSTEELKQAGVHRVIHARKLWKALQEVDASTLLPPPTSRPQLHHFLFTLFEFWSLDDPLLTTYVRLFNDRLGLNLHEELILLTEKDLRRLPMLDGHRIALLHAREE 554
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BLAST of NO13G00060 vs. NCBI_GenBank
Match: XP_005855057.1 (amyotrophic lateral sclerosis 2 (juvenile), partial [Nannochloropsis gaditana CCMP526] >EKU21302.1 amyotrophic lateral sclerosis 2 (juvenile), partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 139.4 bits (350), Expect = 4.300e-29
Identity = 158/191 (82.72%), Postives = 169/191 (88.48%), Query Frame = 0 
Query:    1 MAIMNNKNALYMGELIDKKRDGQGVCRWEDGNVYDGEWREDKRHGRGKFLIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVAEGDGRFHAAAFAVDRTFPDCKPEDVPALAMKEVRAKLREIQKKPIEPDTPSSTS 192
            MA M NKNA+YMGELID KRDGQGVCRWEDGNVYDGEWREDKRHGRG F+IG XXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VA G+GR++A AFA+DRTFP+ K E++PALAMKEV AKLREIQ K      P ++S
Sbjct:    1 MANMTNKNAMYMGELIDNKRDGQGVCRWEDGNVYDGEWREDKRHGRGMFMIGXXXXXXXXXXXXXXXXXXXXXTWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGEGRYYAVAFALDRTFPESKAEEIPALAMKEVNAKLREIQAKSSHDQNPPASS 191
The following BLAST results are available for this feature:
BLAST of NO13G00060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM22865.12.500e-9863.37MORN repeat-containing protein [Nannochloropsis ga... [more]
XP_005855057.14.300e-2982.72amyotrophic lateral sclerosis 2 (juvenile), partia... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL132nonsL132Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR056ngnoR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001885NSK001885Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00060.1NO13G00060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100341g6gene7588Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00060.1NO13G00060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00060 ID=NO13G00060|Name=NO13G00060|organism=Nannochloropsis oceanica|type=gene|length=2589bp
CTGTAGGGCGGGTTACGCCCACCGCCCAGTGTTTCTATCATTGCTTCAGT
AGGTGGCGAGAATACGAGGAGGCTGCGACAGCCCATCGAGGGGTGGAGGG
CAGGAGGCAGAGGCAAAAGTGACCCACTTGAAGCACGACACTTGACTGCT
CGTTTCCTAGCGTACCTCTAAACCAGCTCCATGGCCATTATGAACAACAA
GAACGCCCTGTACATGGGTGAGCTCATCGACAAGAAGCGCGATGGGCAGG
GTGTGTGTCGATGGGAGGACGGGAATGTCTATGACGGGGAGTGGCGCGAG
GACAAGCGGCACGGACGAGGCAAGTTCTTGATAGGGGAAACAGGAGACGA
GTATGTGGGGGAGTGGAAGCACGGCAAGGCGGATGGTTACGGGGTCATGA
CCTGGGTATTAGGCACGCGGTACGAGGGCTTATGGCGGGAGAACCGCCGG
AATGGCTTTGGGACCTTTTATTACTTAGACGGCATTATCTACCGGGGAGA
ATGGGTGGAAAACAAGCGGCAGGGCAATGGTACGCTGCACTTCTCGGATG
GCAGCATGTTCATTGGCCAATTTGTGGAGGACCACGTGGCGGAGGGGGAT
GGGCGCTTTCACGCCGCGGCTTTTGCGGTGGACCGGACCTTCCCTGATTG
CAAGCCCGAGGACGTGCCTGCTCTGGCCATGAAGGAAGTCAGGGCCAAGC
TCCGTGAGATTCAGAAGAAGCCAATAGAGCCCGATACCCCGTCTTCCACC
TCTTCTTTCTCGCACTACCTCAAGCACCAGCAAAGTAGCAGCACAAGCGG
CGGCACCCCGCGGGTCTCGGGGGCCGTGCAAGTCACCAAAGCAGGAGGCA
CGGCGGATAACCCCTCATCCCGGACCGGTGTGGTCCTCCTACCTTCCCCA
GGCCGTAGCTCAACCCCAATCAACCTCGGCCTTTACAACACCGGCAAAAA
CGCCGCACGAGTGGCCGCTACCAATTCTGCTGAAGTCGCTTCTCGGGGGC
AAGCGCTGGCCTTGGGCATGAGTCCAAACAGGGATATGGGACGAGGCATC
GTACAACACCAGCGAGAACCAACCCCCAGCAGCAACAGCAGCTCGGCTAT
TTTCCACACAGGCAGCCCTCTATTCAAAGCAAAGACTGCGACTGCGAATG
GCTGTGGCAGCAGCTCTCGATCTGTCTCTCAACAGCAGCATCAGCATCAG
GGAGGGAATGTGACACACCAACACCAGAAGACATCGCTGCCAGCACCGCA
AGCAATGCAAGCCCAGCCACACCCCAAGCGCAAGGCCCCAGGCTTTGCCC
GCCTCAAAGAGATCGGATTAGAACGACACCTGCTTCGCGATCTGCTCGTC
TCCACGTTGGGGGAGAGCCGAGAGGTCGACCGGTATTTGGGTATCCTCCG
ACCCAAGGGCTTAGACAATTTACTATCGCTCAAGCTCCAGATAACGTCCA
CAGAGGAATTGAAACAGGCAGGAGTACACCGTGTAATTCATGCGCGCAAG
CTCTGGAAGGCCCTTCAAGACGTCGACTGCAGCACCCTCCTCCTTCCCCC
CTCCTCCCACCCGCAGCTGCATCATTTCCTCTTTACCCTATTCGAATTCT
GGTCGTTGGACGACCAACTGCTGCTAACCTATGTCAGGCTGTTTGCGGAC
CGCTTGGGGCTGACCATGCATGAGGAGTTGGTGATGTTGACCGAGAGAGA
TTTGCGGCGCTTGCCCCTGCTCGACGGACATCGCATTGCCTTATTACATG
TCCGCGAAGAGATGCTCGAGAGGAAAAAGGAGAAGGCTCTGGAAAAACAG
CGTAAGCAAGTGCAAGAGCAGCATCAGCAACGGCAGCAGCAGCGACGTGG
GTCGCCTGTAGCTGTTCGACCTCCTCCGGCTCCCCATGCCCCTGTCCGAG
CGCGGGCACCAGTCCCACCATCTGCTCCCGGAACATCACCAACTCGCAAA
TCGCCTTCAACAATGGCTTCAGCCCTACTCCAGCCCCCGCGCTTTCGGCA
ATCAAAGCCGCAGCAACCAGGGCAGCAGCAGGTCCCGCCACAGCAGCAAC
ACCGACGGGCGACCCCCTCGCCGCCACCGCCGATGCCGCCTCTTCAACAA
AAAGACTACCAGCATCAACCGCAGCAACGATCCAGGCATCAGCAGCAGCA
GCCGCAGTGGTACCAGCCCTCGTTACAGCCCCGACGATCACACCACCCTA
ATCTACCACCAGAATCGCCCAAGTCCCCGAACCCTGTGGTGGCCTCCGCA
TATGCCGGACGAGGAATGGCAGGCTCGCCCAGCCTCTACTTTGGAGACAG
GGGGCCGGAAGGGCGTTCAGAGGAGAGAAGAAGATAAAGGAGAGGCAGGA
AATGATCCTATAGCATACTAGATTTAACTTGAATGTAAAAGAATGAATTC
ATTTGTAGATTTGTAAAGGAGGTTGGGTGGCAGGGCCAGAAAGTCGTCGA
CCTGTGTCCGACGTGAAATCCAAATTGTACTTTTGGTGCAGCAGGTAATA
ATACATAAAGTAGAAATGTTGCGTGCAAGGAAAAATGACGATCTCAGCAC
CGAGAAGGAAGACCATTTAAGCGAATGATTGAAACGAAG
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protein sequence of NO13G00060.1

>NO13G00060.1-protein ID=NO13G00060.1-protein|Name=NO13G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=719bp
MAIMNNKNALYMGELIDKKRDGQGVCRWEDGNVYDGEWREDKRHGRGKFL
IGETGDEYVGEWKHGKADGYGVMTWVLGTRYEGLWRENRRNGFGTFYYLD
GIIYRGEWVENKRQGNGTLHFSDGSMFIGQFVEDHVAEGDGRFHAAAFAV
DRTFPDCKPEDVPALAMKEVRAKLREIQKKPIEPDTPSSTSSFSHYLKHQ
QSSSTSGGTPRVSGAVQVTKAGGTADNPSSRTGVVLLPSPGRSSTPINLG
LYNTGKNAARVAATNSAEVASRGQALALGMSPNRDMGRGIVQHQREPTPS
SNSSSAIFHTGSPLFKAKTATANGCGSSSRSVSQQQHQHQGGNVTHQHQK
TSLPAPQAMQAQPHPKRKAPGFARLKEIGLERHLLRDLLVSTLGESREVD
RYLGILRPKGLDNLLSLKLQITSTEELKQAGVHRVIHARKLWKALQDVDC
STLLLPPSSHPQLHHFLFTLFEFWSLDDQLLLTYVRLFADRLGLTMHEEL
VMLTERDLRRLPLLDGHRIALLHVREEMLERKKEKALEKQRKQVQEQHQQ
RQQQRRGSPVAVRPPPAPHAPVRARAPVPPSAPGTSPTRKSPSTMASALL
QPPRFRQSKPQQPGQQQVPPQQQHRRATPSPPPPMPPLQQKDYQHQPQQR
SRHQQQQPQWYQPSLQPRRSHHPNLPPESPKSPNPVVASAYAGRGMAGSP
SLYFGDRGPEGRSEERRR*
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Synonyms
Publications