NO12G03900, NO12G03900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03900 vs. NCBI_GenBank
Match: XP_005853403.1 (augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >XP_005855096.1 augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >EKU21266.1 augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526] >EKU22957.1 augmenter of liver regeneration, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.2 bits (622), Expect = 4.400e-61 Identity = 122/244 (50.00%), Postives = 146/244 (59.84%), Query Frame = 0 Query: 11 NLLAAVEEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKQQSPASFVSSINSSKKEKIYVIEPGEGKKKAAP 255 N LAAVEEECEHAACK+MLD+L RK HCPLD + LGD TWG+LHSTAAYYP++PTPQEQSLAAGL+HGIAGLYPCT+CR DF+ C++ PPRVE+REAF+VWVC+QHN VN+KLGK +FPC+L +LD+RW+ GE RCWGE+ TKQQ S + +K K Y+IEPG GKKK P Sbjct: 25 NPLAAVEEECEHAACKSMLDLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFEECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEK---------------GGEDNNHRQAGADLTPAGAHTKQQEHIPSAPSPLTRRKSKFYIIEPGVGKKKTGP 253
BLAST of NO12G03900 vs. NCBI_GenBank
Match: EWM25641.1 (augmenter of liver regeneration [Nannochloropsis gaditana]) HSP 1 Score: 239.6 bits (610), Expect = 1.100e-59 Identity = 121/244 (49.59%), Postives = 143/244 (58.61%), Query Frame = 0 Query: 11 NLLAAVEEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKQQSPASFVSSINSSKKEKIYVIEPGEGKKKAAP 255 N LAAVEEECEHAACK+ML RK HCPLD + LGD TWG+LHSTAAYYP++PTPQEQSLAAGL+HGIAGLYPCT+CR DFQ C++ PPRVE+REAF+VWVC+QHN VN+KLGK +FPC+L +LD+RW+ GE RCWGE+ TKQQ S + +K K Y+IEPG GKKK P Sbjct: 88 NPLAAVEEECEHAACKSMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNHCPLDKDTLGDMTWGVLHSTAAYYPESPTPQEQSLAAGLVHGIAGLYPCTYCRTDFQECIQALPPRVESREAFSVWVCKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEK---------------GGEDNNHRQAGADLTPAGAHTKQQEHILSAPSPLTRRKSKFYIIEPGVGKKKTGP 316
BLAST of NO12G03900 vs. NCBI_GenBank
Match: CCA15302.1 (augmenter of liver regeneration putative [Albugo laibachii Nc14]) HSP 1 Score: 158.3 bits (399), Expect = 3.200e-35 Identity = 72/174 (41.38%), Postives = 107/174 (61.49%), Query Frame = 0 Query: 8 PSQNLLAAVEEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCW 182 P N + + C ACK+ +D+ + G S KG R++S +P EA RK CPLD LG +TWG++HS YYP+ P+ + Q A + +A +YPC+ C +DF+ + + PP+VE+R+AF++W+CEQHN VN+K+GK LF CN++TL +RWR G+ CW Sbjct: 3 PHLNSKSDADPNCVEPACKSKVDLFRHFVG--SDKKGK--REASSLTP------QEAEQRKIECPLDREELGRSTWGLMHSIGVYYPEKPSEEYQRHARSFVEALALMYPCSDCAEDFRKEIAKCPPKVESRQAFSMWLCEQHNLVNEKIGKPLFQCNMSTLSERWRTGKKECW 166
BLAST of NO12G03900 vs. NCBI_GenBank
Match: XP_009519041.1 (hypothetical protein PHYSODRAFT_284799 [Phytophthora sojae] >EGZ23753.1 hypothetical protein PHYSODRAFT_284799 [Phytophthora sojae]) HSP 1 Score: 157.1 bits (396), Expect = 7.000e-35 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 17 EEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 + C AC +D KS+ G AT+ +++ P+ CPLD LG+ATWG+LHS YYPD P+P+ Q+ A I +A +YPC HC DFQ + ++PPRVE+R F++W+CEQHN VN K+ K LF C + L++RWRKG+ CWGE+ Sbjct: 7 DPNCVEPACADKMDFFKSSMGK------KATKPAAQPKPATD------------CPLDRQELGNATWGLLHSMGIYYPDKPSPEYQAKAKTFIEALALMYPCVHCADDFQKEIAKSPPRVESRTTFSMWLCEQHNIVNRKIHKPLFECTMEKLEERWRKGKPSCWGED 156
BLAST of NO12G03900 vs. NCBI_GenBank
Match: CCI44583.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 157.1 bits (396), Expect = 7.000e-35 Identity = 74/177 (41.81%), Postives = 110/177 (62.15%), Query Frame = 0 Query: 8 PSQNLLAAVEEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 PS N + + C ACK+ +D+ + + S KG E S S S E+A +KA CPLD LG +TWG++HS YYP+NP+ + Q A I +A +YPC+ C +DF+ + + PPRV++R++F++W+CEQHN VN+K+GK +F CN++TL +RWR G+ CW E Sbjct: 3 PSINSKSDADPNCVEPACKSKVDLFRHF--IKSDKKG-----IKEESRSASV---ESAQQKAECPLDREELGRSTWGLMHSIGMYYPENPSEEYQRHARSFIEALALMYPCSDCAEDFRKEIIKCPPRVKSRQSFSLWLCEQHNLVNEKIGKPIFQCNMSTLSERWRTGKKECWNIE 169
BLAST of NO12G03900 vs. NCBI_GenBank
Match: CBN79383.1 (Mitochondrial intermembrane space Erv1 homolog [Ectocarpus siliculosus]) HSP 1 Score: 156.4 bits (394), Expect = 1.200e-34 Identity = 72/186 (38.71%), Postives = 103/186 (55.38%), Query Frame = 0 Query: 8 PSQNLLAAVEEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAW------------RKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCW 182 PS + +CE AC M D+L+ + + K A ++ + R CPLD LG ATWG++H+TAA+YP+ P+ + Q A L+ G+AGLYPCT+CRKDF+ V++ PP V +R A ++W C+QHN VN+K+GK F C L LD+RW+KG+ CW Sbjct: 2 PSSRRRSKDPADCEDPACADMADLLRKGRALAAKNKQKAASNTATDGKAAGXXXXXXXXXXXXXXXXXXXSRNDGCPLDKGELGAATWGLIHTTAAHYPEKPSKETQDQARALVTGLAGLYPCTYCRKDFREEVRKLPPDVSSRVALSLWACQQHNLVNEKIGKPTFGCTLPALDERWKKGKPSCW 187
BLAST of NO12G03900 vs. NCBI_GenBank
Match: XP_002999133.1 (augmenter of liver regeneration [Phytophthora infestans T30-4] >EEY69279.1 augmenter of liver regeneration [Phytophthora infestans T30-4]) HSP 1 Score: 155.2 bits (391), Expect = 2.700e-34 Identity = 74/168 (44.05%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 17 EEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 + C AC +D KS+ G TK AT+ PA + CPLD LG+ATWG+LHS YYPD P+P+ Q+ A I +A +YPC HC +DFQ V +PPRVE+R F++W+CEQHN VN K+ K +F C + L++RWRKG+ CWGE+ Sbjct: 7 DPNCVEPACADKMDFFKSSMG--KKTKKTATQPK---------PATD-------CPLDRQELGNATWGLLHSMGIYYPDKPSPEYQAKAKTFIEALALMYPCVHCAEDFQKEVAISPPRVESRTTFSMWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGED 156
BLAST of NO12G03900 vs. NCBI_GenBank
Match: KUF98447.1 (T-complex protein 1 subunit zeta [Phytophthora nicotianae]) HSP 1 Score: 151.4 bits (381), Expect = 3.900e-33 Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 17 EEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 + C AC + KS+ G K ++ + + PA + CPLD LG +TWG+LHS YYPD P+P+ Q+ A + +A +YPC HC +DFQ + ++PPRVE+R F++W+CEQHN VN K+ K +F C L L++RWRKG+ CWGE+ Sbjct: 7 DPNCVEPACADKMGFFKSSMG-----------KKTKKTAAQPKPATD-------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTLEKLEERWRKGKPACWGED 156
BLAST of NO12G03900 vs. NCBI_GenBank
Match: ETI49773.1 (hypothetical protein F443_06548 [Phytophthora parasitica P1569] >ETK89537.1 hypothetical protein L915_06417 [Phytophthora parasitica] >ETL42938.1 hypothetical protein L916_06363 [Phytophthora parasitica] >ETL96114.1 hypothetical protein L917_06231 [Phytophthora parasitica] >ETM49268.1 hypothetical protein L914_06344 [Phytophthora parasitica] >ETO78396.1 hypothetical protein F444_06614 [Phytophthora parasitica P1976] >ETP19410.1 hypothetical protein F441_06553 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 150.6 bits (379), Expect = 6.600e-33 Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 17 EEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 + C AC + KS+ G K ++ + + PA + CPLD LG +TWG+LHS YYPD P+P+ Q+ A + +A +YPC HC +DFQ + ++PPRVE+R F++W+CEQHN VN K+ K +F C + L++RWRKG+ CWGE+ Sbjct: 7 DPNCVEPACADKMGFFKSSMG-----------KKTKKTAAQPKPATD-------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGED 156
BLAST of NO12G03900 vs. NCBI_GenBank
Match: XP_008892099.1 (hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >ETN22879.1 hypothetical protein PPTG_02650 [Phytophthora parasitica INRA-310] >ETP47329.1 hypothetical protein F442_06592 [Phytophthora parasitica P10297]) HSP 1 Score: 150.6 bits (379), Expect = 6.600e-33 Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 17 EEECEHAACKTMLDVLKSAAGMPSSTKGNATRKSSESSPSVSFPADEAAWRKAHCPLDINALGDATWGMLHSTAAYYPDNPTPQEQSLAAGLIHGIAGLYPCTHCRKDFQACVKEAPPRVENREAFAVWVCEQHNAVNDKLGKSLFPCNLATLDKRWRKGEARCWGEE 185 + C AC + KS+ G K ++ + + PA + CPLD LG +TWG+LHS YYPD P+P+ Q+ A + +A +YPC HC +DFQ + ++PPRVE+R F++W+CEQHN VN K+ K +F C + L++RWRKG+ CWGE+ Sbjct: 7 DPNCVEPACADKMGFFKSSMG-----------KKTKKTAAQPKPATD-------CPLDRQELGKSTWGLLHSMGIYYPDKPSPEYQAKAKTFVEALALMYPCVHCAEDFQKEIAKSPPRVESRTTFSIWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGED 156 The following BLAST results are available for this feature:
BLAST of NO12G03900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03900 ID=NO12G03900|Name=NO12G03900|organism=Nannochloropsis oceanica|type=gene|length=765bpback to top protein sequence of NO12G03900.1 >NO12G03900.1-protein ID=NO12G03900.1-protein|Name=NO12G03900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
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