NO12G03700, NO12G03700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03700 vs. NCBI_GenBank
Match: OQR93434.1 (glutamate-cysteine ligase catalytic subunit [Achlya hypogyna]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-10 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGLKEEE 74 MGLL VG PL+WEDALP L +VR G+ QFL TY ++ + LKWG+E+E GIF++ PE + L+ E Sbjct: 1 MGLLVVGTPLRWEDALPWLHHVRRNGIQQFLETYHRVKDIRGDVLKWGDELEYGIFELDPETKTARLSLRGSE 73
BLAST of NO12G03700 vs. NCBI_GenBank
Match: XP_009039893.1 (hypothetical protein AURANDRAFT_30964 [Aureococcus anophagefferens] >EGB05512.1 hypothetical protein AURANDRAFT_30964 [Aureococcus anophagefferens]) HSP 1 Score: 71.2 bits (173), Expect = 1.800e-9 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKI 59 MG+L VG+PL WE+ALPHL+YVR+ GVLQF+ Y + + K L +G+E+E G+F + Sbjct: 1 MGVLTVGRPLSWEEALPHLRYVRDHGVLQFINHYRKYEHITKDALYYGDEIEYGLFAL 58
BLAST of NO12G03700 vs. NCBI_GenBank
Match: CBJ30287.1 (Glutamate cysteine ligase [Ectocarpus siliculosus]) HSP 1 Score: 68.9 bits (167), Expect = 9.000e-9 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 2 GLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKI 59 GLL+VG P+ W A+PHL YVR+ GV QF++ Y ++ + ELKWG+E+E I K+ Sbjct: 28 GLLRVGTPMPWGQAMPHLGYVRDHGVKQFVSRYRKVEGIENDELKWGDELEYAILKV 84
BLAST of NO12G03700 vs. NCBI_GenBank
Match: OEU14148.1 (gamma glutamylcysteine synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.9 bits (167), Expect = 9.000e-9 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGLKEEE 74 MGLLKVG P W+D+ L+Y+R+ GV QF++TY ++ L EL WG+E+E GIF I PE + L+ +E Sbjct: 1 MGLLKVGVPKSWDDSKKDLEYIRKAGVRQFISTYNRVKDLKGDELLWGDEVEYGIFHIDPETKKVRLSLRAKE 73
BLAST of NO12G03700 vs. NCBI_GenBank
Match: OEU14149.1 (gamma glutamylcysteine synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.9 bits (167), Expect = 9.000e-9 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGLKEEE 74 MGLLKVG P W+D+ L+Y+R+ GV QF++TY ++ L EL WG+E+E GIF I PE + L+ +E Sbjct: 42 MGLLKVGVPKSWDDSKKDLEYIRKAGVRQFISTYNRVKDLKGDELLWGDEVEYGIFHIDPETKKVRLSLRAKE 114
BLAST of NO12G03700 vs. NCBI_GenBank
Match: EWM21684.1 (glutamate-cysteine ligase, partial [Nannochloropsis gaditana]) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-8 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 2 GLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKI 59 GLLKVG+PL W +LPHL+ VR GV QFL Y L+ + + +L WGEE+E GI K+ Sbjct: 70 GLLKVGRPLFWPSSLPHLRPVRRAGVRQFLNIYHRLKDIQQDDLLWGEEVEYGILKV 126
BLAST of NO12G03700 vs. NCBI_GenBank
Match: OWZ02824.1 (Glutamate-cysteine ligase catalytic subunit [Phytophthora megakarya]) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-8 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIF 57 MGLL G PL W DAL LQ+VR QG+ QFL TY ++ + ELKWG+E+E G+F Sbjct: 1 MGLLVEGSPLDWPDALEWLQHVRTQGIDQFLHTYNRVKDIEGDELKWGDELEYGVF 56
BLAST of NO12G03700 vs. NCBI_GenBank
Match: XP_009537024.1 (hypothetical protein PHYSODRAFT_348222 [Phytophthora sojae] >EGZ07458.1 hypothetical protein PHYSODRAFT_348222 [Phytophthora sojae]) HSP 1 Score: 67.0 bits (162), Expect = 3.400e-8 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGL 70 MGLL G PL W DAL LQ+VR QG+ QFL TY ++ + ELKWG+E+E G+F++ +K+ K L Sbjct: 1 MGLLVEGSPLDWPDALEWLQHVRTQGIDQFLHTYRRVKDIEGDELKWGDELEYGVFQM--DKDSKRARL 67
BLAST of NO12G03700 vs. NCBI_GenBank
Match: ETI53399.1 (hypothetical protein F443_03644 [Phytophthora parasitica P1569]) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-8 Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGL 70 MGLL G PL W DAL LQ+VR QG+ QFL TY ++ + ELKWG+E+E G+F + +KE K L Sbjct: 1 MGLLVEGSPLDWPDALEWLQHVRTQGIDQFLHTYNRVKDIEGDELKWGDELEYGVFHM--DKETKRARL 67
BLAST of NO12G03700 vs. NCBI_GenBank
Match: ETK93237.1 (hypothetical protein L915_03537, partial [Phytophthora parasitica] >ETL99788.1 hypothetical protein L917_03404, partial [Phytophthora parasitica] >ETP23178.1 hypothetical protein F441_03637, partial [Phytophthora parasitica CJ01A1]) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-8 Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0 Query: 1 MGLLKVGQPLKWEDALPHLQYVREQGVLQFLATYEALQTLVKPELKWGEEMEIGIFKIVPEKEGKEEGL 70 MGLL G PL W DAL LQ+VR QG+ QFL TY ++ + ELKWG+E+E G+F + +KE K L Sbjct: 43 MGLLVEGSPLDWPDALEWLQHVRTQGIDQFLHTYNRVKDIEGDELKWGDELEYGVFHM--DKETKRARL 109 The following BLAST results are available for this feature:
BLAST of NO12G03700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03700 ID=NO12G03700|Name=NO12G03700|organism=Nannochloropsis oceanica|type=gene|length=598bpback to top protein sequence of NO12G03700.1 >NO12G03700.1-protein ID=NO12G03700.1-protein|Name=NO12G03700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=91bpback to top Synonyms
Publications
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