NO12G03640, NO12G03640 (gene) Nannochloropsis oceanica

Overview
NameNO12G03640
Unique NameNO12G03640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4547
Alignment locationchr12:998873..1003419 -

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Properties
Property NameValue
DescriptionPeptidase m50
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:998873..1003419 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO12G03640 vs. NCBI_GenBank
Match: XP_005854341.1 (peptidase m50 [Nannochloropsis gaditana CCMP526] >EKU22017.1 peptidase m50 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 899.4 bits (2323), Expect = 1.100e-257
Identity = 455/601 (75.71%), Postives = 511/601 (85.02%), Query Frame = 0
Query:  505 IPDVVFRRIRRKELNADESFQRAMGAFQRMMDTTEGGEGEGGGVEGGMDGDASLLANSLNPSPLGVNLTAIMLEETDAGKVKDGLLEGFLQSIFPTAQ---EGGLXXXXXXXXXXVPPLPEDTWHTIRSEVFGKTAGGAFSLNYVVDFDSKFHVMVGEIGEGPSGATLNTQALRQVLEKRLDYFNLTETVSLFFLRFPPETLFELEDIAMDAAMDQFDENGGPPEGGKGNRQGKRGGARMDEDDGL-DGSDLQLLGELVPRFLGKLAQGRFAILAVAKRDAPDDSSVLDDPIVRLATVAMGSVLQTSETLRYVSPPLFERLDQDLPGFVTHASEFPALTQGVPPVLFPFLGLIVAHEAGHWLAAKRSNMELGPFVPLLDPWFGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAGDSTYLLNNL 1102
            +PDVVFRRIRRK LN DESFQRAMGA QRM++T EGG+    G     +  A+LLA SLNP P G+NLTA+MLEETDAGKVKDGLLE FLQSIFP A+   EGG+          V P+PE  W ++R+EVFGKTAGGAF LNYVVDFD+KFHVMVGE+G  PSG  L+T ALR+VL +RL+YFNLT+ VSLFFLRFPPETLF LEDIAMDAAMDQFDE+GGPPE G G R  + G   + E++ + +G DL+L+GEL+PRFLGKLAQGRFAILAV+K   PDDSSVLDDPIVR A++ MG++LQTSETLR+VSPPLFERLD+D  GF  H SEFPA+T G+PPVL PF GLI AHEAGH+LAA+R N+ LGP VPLLDPWFGY GSL+QLKSYPPTR+AFFDV+AAGPLLGSLVSY     GLWLTKLG LP+GGEFAPALPL+LLQASTFVAEMTNA LPGAFAVVDP HAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVE+LLG+RTA+AASTFTFWGT+AAGIWQ RLDLFFAG+VVR FW RKAVPC+DEVEEV G+RYFLG+AGLILMLGALIPATS FAGDSTYLLNNL
Sbjct:    1 MPDVVFRRIRRKALNPDESFQRAMGALQRMIETEEGGK---EGXXXSEEDAAALLARSLNPPPAGMNLTALMLEETDAGKVKDGLLESFLQSIFPGAEMGAEGGM------QDGEVAPVPEHVWKSLRTEVFGKTAGGAFLLNYVVDFDAKFHVMVGEVGTAPSGVPLSTPALREVLNQRLEYFNLTDAVSLFFLRFPPETLFALEDIAMDAAMDQFDEDGGPPEVGSGGRGARPGDGDLSEEELMQEGLDLRLIGELIPRFLGKLAQGRFAILAVSKGVVPDDSSVLDDPIVRAASLGMGALLQTSETLRFVSPPLFERLDRDFLGFWAHVSEFPAVTVGIPPVLLPFAGLIAAHEAGHYLAARRFNVALGPLVPLLDPWFGYLGSLSQLKSYPPTRQAFFDVAAAGPLLGSLVSYGVFGAGLWLTKLGALPAGGEFAPALPLALLQASTFVAEMTNAILPGAFAVVDPGHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVEALLGRRTAAAASTFTFWGTVAAGIWQGRLDLFFAGLVVRFFWSRKAVPCMDEVEEVGGERYFLGMAGLILMLGALIPATSHFAGDSTYLLNNL 592          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: XP_005852452.1 (hypothetical protein NGA_0683300, partial [Nannochloropsis gaditana CCMP526] >EKU23380.1 hypothetical protein NGA_0683300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 250.4 bits (638), Expect = 2.600e-62
Identity = 136/207 (65.70%), Postives = 154/207 (74.40%), Query Frame = 0
Query:  124 LLLEVEKMQNKAFREIGILGRPLPPLLLEKLKTDGRLGTAAERDALQKAEEVSPMSSEGQRGMMEALRLRAMAKKLRAEADLAEVEMANEKVNQTMRGLLEGVDVGMVLVNSPRGGRGGWEGEKEEGQLVAMEVARKAFARILGLEGTMAPPLSTVERKMGEVDSEEGGGVWRGGEE---RRPSWVRGEDMWDEDLPDLSIRGEEGG 328
            LLLEVE MQN+AFRE+G+LGRPLPP++LEKLK DGR+GTA ER ALQKA +V P   EGQ+ M+EALRLRAMAKKLRAEADLAEVE+ANEKVN TMR LL GVDVG+ L+N  RGG  G                R+AFAR+LGLE    PPLSTVER+  EVD +E  G+  G  E   RRPSWVRGEDMWDED+PDLSI G E G
Sbjct:  115 LLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGXXXXXXXXXXXXXXXXRQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERG 321          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: EWM25681.1 (hypothetical protein Naga_101294g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 250.4 bits (638), Expect = 2.600e-62
Identity = 136/207 (65.70%), Postives = 154/207 (74.40%), Query Frame = 0
Query:  124 LLLEVEKMQNKAFREIGILGRPLPPLLLEKLKTDGRLGTAAERDALQKAEEVSPMSSEGQRGMMEALRLRAMAKKLRAEADLAEVEMANEKVNQTMRGLLEGVDVGMVLVNSPRGGRGGWEGEKEEGQLVAMEVARKAFARILGLEGTMAPPLSTVERKMGEVDSEEGGGVWRGGEE---RRPSWVRGEDMWDEDLPDLSIRGEEGG 328
            LLLEVE MQN+AFRE+G+LGRPLPP++LEKLK DGR+GTA ER ALQKA +V P   EGQ+ M+EALRLRAMAKKLRAEADLAEVE+ANEKVN TMR LL GVDVG+ L+N  RGG  G                R+AFAR+LGLE    PPLSTVER+  EVD +E  G+  G  E   RRPSWVRGEDMWDED+PDLSI G E G
Sbjct:  115 LLLEVEAMQNRAFRELGVLGRPLPPVVLEKLKVDGRIGTAPERGALQKAGDVGPGGREGQKAMLEALRLRAMAKKLRAEADLAEVELANEKVNGTMRNLLAGVDVGLALLNEARGGMAGXXXXXXXXXXXXXXXXRQAFARVLGLEVRAPPPLSTVERRATEVDHDEEDGMDGGRSEGGMRRPSWVRGEDMWDEDMPDLSIGGSERG 321          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: XP_005712081.1 (unnamed protein product [Chondrus crispus] >CDF32416.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 155.2 bits (391), Expect = 1.200e-33
Identity = 95/250 (38.00%), Postives = 137/250 (54.80%), Query Frame = 0
Query:  844 PVLFPFLGLIVAHEAGHWLAAKRSNMELG--PFVPLLDPWFGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFA 1092
            PV    + L   HEAGH +AA   ++++G   F+P L    G +G++T L+SYP  RK  FDV+ AGPL+GS+ S +AL  GL +T  G +    ++ P +P +L  AS  V  + +  LP        E A + +HPLA+ GY G++ NALNL+P+GRLDG R++++L G+  AS A+  T      + +  N   L F G+V          PC +EV E  G R  +GV  + LML  LIP     A
Sbjct:  306 PVSIGAIILAFMHEAGHRVAASMRDVKIGLPYFIPSLQ--IGTYGTITPLESYPNLRKDLFDVAVAGPLVGSVASISALIAGLLITSSGQI---ADWFPQVPSALFHASILVGSLADIILPAGLR----EQATIAVHPLAVVGYTGLLANALNLMPIGRLDGGRIMQALYGRAVASRATAITLLLQGFSSLLGNSPLLLFWGLVAVFLQRESDYPCRNEVLEPDGTRTAIGVGAICLMLLVLIPFPDQLA 546          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: WP_035985423.1 (site-2 protease family protein [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 149.1 bits (375), Expect = 8.300e-32
Identity = 91/251 (36.25%), Postives = 135/251 (53.78%), Query Frame = 0
Query:  844 PVLFPFLGLIVAHEAGHWLAAKRSNMELGPFVPLLDP-W-FGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAG 1093
            P L   L +++ HEAGHW++A+R N+ L P  P L P W  G FGSLT+ +S  P R   FD++ AGP  G L+S A L GGL L+  G        A  +P    Q S  +  +    L  A      +   + +HPL + G+ G++  ALNL+P G+LDG RMV+++ G+RT +  + FT    +A     N L L++AG+++ +       PCL+++ E +  R  LG+  L L L  L+P T   AG
Sbjct:  253 PFLVALLAILLTHEAGHWVSARRYNIRLSP--PFLIPAWQIGAFGSLTRFESLLPNRSVLFDIALAGPAAGGLISLAMLMGGLLLSHPG-------SAFQIPSGFFQGSVLIGALARVVLGSAL-----QAPLVDIHPLTIMGWLGLVITALNLMPAGQLDGGRMVQAIYGRRTLNRTTLFTL-VVLALVALANPLALYWAGVIL-ILQRTPERPCLNDISEPNDARAALGLLALFLALTVLLPLTPSLAG 487          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: WP_106867988.1 (MULTISPECIES: site-2 protease family protein [unclassified Cyanobacteria (miscellaneous)] >PSN14718.1 site-2 protease family protein [filamentous cyanobacterium CCT1] >PSN79905.1 site-2 protease family protein [filamentous cyanobacterium CCP4])

HSP 1 Score: 149.1 bits (375), Expect = 8.300e-32
Identity = 94/251 (37.45%), Postives = 133/251 (52.99%), Query Frame = 0
Query:  844 PVLFPFLGLIVAHEAGHWLAAKRSNMELGPFVPLLDP-W-FGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAG 1093
            P L   L ++VAHEAGHW+ A+R N+ L P  P L P W  G FGSLT+ +S  P R   FD++ AGP  G LVS A L GGL L+  G        A  +P    Q S  +  +    L  A      +   + +HPL + G+ G++  ALNL+P G+LDG R+V+ + G++T S  + FT    +A     N L L++A ++V L       PCL+++ E +  R  LG+  L L L  L+P T   AG
Sbjct:  253 PFLVALLVILVAHEAGHWVTARRYNIRLSP--PFLIPAWQIGAFGSLTRFESLLPNRSVLFDIALAGPAAGGLVSLAMLLGGLLLSHPG-------SAFQIPSGFFQGSILIGALARVVLGSAL-----QEPLVDIHPLTIMGWLGLVITALNLMPAGQLDGGRLVQGIYGRKTLSRTTLFTL-VVLALVALANPLALYWAAVIV-LLQRTPERPCLNDISEPNDARAALGLLALFLALTVLLPLTPSLAG 487          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: WP_017296618.1 (site-2 protease family protein [Nodosilinea nodulosa])

HSP 1 Score: 148.7 bits (374), Expect = 1.100e-31
Identity = 92/251 (36.65%), Postives = 132/251 (52.59%), Query Frame = 0
Query:  844 PVLFPFLGLIVAHEAGHWLAAKRSNMELGPFVPLLDP-W-FGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAG 1093
            P L   L +++AHEAGHW  A+R N+ L P  P L P W  G FGSLT+ +S  P R   FD++ AGP  G LVS A L GGL L+  G        A  +P    Q S  +  +    L  A      +   + +HPL + G+ G++  ALNL+P G+LDG RMV+++ G++T +  + FT    +A     N L L++AG++  L       PCL+++ E +  R  L +  L L L  L+P T   AG
Sbjct:  253 PFLLALLAILIAHEAGHWTTARRYNIRLSP--PFLIPAWQIGAFGSLTRFESLLPNRSVLFDIALAGPAAGGLVSLAMLVGGLLLSHPG-------SAFQIPAGFFQGSILIGALARVVLGAAL-----QEPLVDIHPLTIMGWLGLVITALNLMPAGQLDGGRMVQAIYGRKTLNRTTVFTL-VVLALVSLANPLALYWAGVIF-LLQRAPERPCLNDISEPNDARAALSLLALFLALTVLLPLTPSLAG 487          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: OKH51261.1 (site-2 protease family protein [Phormidium tenue NIES-30])

HSP 1 Score: 146.4 bits (368), Expect = 5.400e-31
Identity = 91/256 (35.55%), Postives = 136/256 (53.12%), Query Frame = 0
Query:  840 QGVPPVLFPFLGLIVAHEAGHWLAAKRSNMELGP--FVPLLDPW-FGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAG 1093
            Q   P L   L ++++HE+GHW+AA+R  + L P  F+P    W  G FGSLT+ +S    R   FD+S AGP  G +VS A L GGL L+  G        A  +P    Q S  +  +    L  A      +   + +HPL + G+ G++  ALNL+P G+LDG RMV+++ G++TA+  + FT    +A     N L L++AG++V +       PCL+++ E +  R  LG+  L L L  L+P T   AG
Sbjct:  247 QAALPFLVALLVILLSHESGHWIAARRYGVRLSPPFFIP---AWQIGAFGSLTRFESLLANRSVLFDISLAGPAAGGIVSLAMLVGGLLLSHPG-------SAFQIPSGFFQGSVLIGALAKVVLGSAL-----QAPLVDIHPLTIMGWLGLVITALNLMPAGQLDGGRMVQAIYGRKTANRTTVFTL-VVLALVALANPLALYWAGVIV-ILQRTLERPCLNDISEPNDARAALGLLALFLALTVLLPLTPSLAG 485          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: WP_084172857.1 (site-2 protease family protein [Phormidium tenue])

HSP 1 Score: 146.4 bits (368), Expect = 5.400e-31
Identity = 91/256 (35.55%), Postives = 136/256 (53.12%), Query Frame = 0
Query:  840 QGVPPVLFPFLGLIVAHEAGHWLAAKRSNMELGP--FVPLLDPW-FGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAG 1093
            Q   P L   L ++++HE+GHW+AA+R  + L P  F+P    W  G FGSLT+ +S    R   FD+S AGP  G +VS A L GGL L+  G        A  +P    Q S  +  +    L  A      +   + +HPL + G+ G++  ALNL+P G+LDG RMV+++ G++TA+  + FT    +A     N L L++AG++V +       PCL+++ E +  R  LG+  L L L  L+P T   AG
Sbjct:  269 QAALPFLVALLVILLSHESGHWIAARRYGVRLSPPFFIP---AWQIGAFGSLTRFESLLANRSVLFDISLAGPAAGGIVSLAMLVGGLLLSHPG-------SAFQIPSGFFQGSVLIGALAKVVLGSAL-----QAPLVDIHPLTIMGWLGLVITALNLMPAGQLDGGRMVQAIYGRKTANRTTVFTL-VVLALVALANPLALYWAGVIV-ILQRTLERPCLNDISEPNDARAALGLLALFLALTVLLPLTPSLAG 507          
BLAST of NO12G03640 vs. NCBI_GenBank
Match: XP_005705620.1 (peptidase, M50 family protein [Galdieria sulphuraria] >EME29100.1 peptidase, M50 family protein [Galdieria sulphuraria])

HSP 1 Score: 144.1 bits (362), Expect = 2.700e-30
Identity = 88/245 (35.92%), Postives = 130/245 (53.06%), Query Frame = 0
Query:  844 PVLFPFLGLIVAHEAGHWLAAKRSNMELGPFVPLLDP--WFGYFGSLTQLKSYPPTRKAFFDVSAAGPLLGSLVSYAALAGGLWLTKLGV-LPSGGEFAPALPLSLLQASTFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGRLDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFWYRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIP 1086
            P+    + +++ HE GH + A   N++LG  +PL  P    G +G++T LK +P  R  FFDV+ AGPL+G + S      GL L++  +   +  ++ P +P  L +AS  V  +     P     +D  H  + +HPL + GY G++ NALNLLP+GRLDG R+V+ + G+ TAS     T        +  N   L F GI V LF     +PC DE+ E +  R  LG+  L +ML  LIP
Sbjct:  379 PISLGAIAIVLLHEMGHRIVASMKNIKLG--LPLTVPSLQIGSYGTITPLKDFPKNRSDFFDVTVAGPLVGVVTSVTLFVVGLTLSQQSLDSQTIPDWFPQVPSLLFRASMLVGSLAKIIAP----YLDLSHNTVAVHPLTVVGYTGLLINALNLLPIGRLDGGRIVQCIFGRSTASRVGGITLLLQGLGAVLGNSPLLLFWGIFVVLFQREMDLPCEDELTEPNNKRSALGLVLLFVMLFTLIP 617          
The following BLAST results are available for this feature:
BLAST of NO12G03640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854341.11.100e-25775.71peptidase m50 [Nannochloropsis gaditana CCMP526] >... [more]
XP_005852452.12.600e-6265.70hypothetical protein NGA_0683300, partial [Nannoch... [more]
EWM25681.12.600e-6265.70hypothetical protein Naga_101294g1, partial [Nanno... [more]
XP_005712081.11.200e-3338.00unnamed protein product [Chondrus crispus] >CDF324... [more]
WP_035985423.18.300e-3236.25site-2 protease family protein [Leptolyngbya sp. K... [more]
WP_106867988.18.300e-3237.45MULTISPECIES: site-2 protease family protein [uncl... [more]
WP_017296618.11.100e-3136.65site-2 protease family protein [Nodosilinea nodulo... [more]
OKH51261.15.400e-3135.55site-2 protease family protein [Phormidium tenue N... [more]
WP_084172857.15.400e-3135.55site-2 protease family protein [Phormidium tenue][more]
XP_005705620.12.700e-3035.92peptidase, M50 family protein [Galdieria sulphurar... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010338NSK010338Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03640.1NO12G03640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592885gene_5541Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101294g1gene4833Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03640.1NO12G03640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03640 ID=NO12G03640|Name=NO12G03640|organism=Nannochloropsis oceanica|type=gene|length=4547bp
AGTAGGTAGGGTTTGTCTCTCTGTGTGTTGGTAAGGTGTGTACAAGTGAG
AGGGAGGAAGGATGGGTTGGGGCGTTGTGGGAAGGAGATAAAGCTGTCAA
CAAACGCCGCCTGGAACATCTAGAAGGCAGATATAATTGTCACACGCTTG
AGCTGGGACAGTAGCGATGGTTGTGCGTGCATAGCAAGCGTGGGAGGGCA
CGGAGTGGGAGAGTAGGGTGAGGATGAACGCCTGGCCACTGCTTCTTCTG
AAGGACAACGACTTGCTTCGGCTCCCATGTCCTTCATGTTTGTGGAGCTG
CCACGCCCGCAGGAATTATTCTGCAATAGTATGAATGCAGCATCCATGAC
TCAGCCTACACAATCAACAGATAAGTCGATGGGAATGGGTAAAGAAAGCA
GTGGAGCACCGCACAGACAACACTAAACCAGCACGCAGAGACGGAAGACT
CTCTGGGCATTGCGCGAGCGACGGCGAGAAACATGAGGAGCGCTGCCGAG
gcatgttcgagtagcttgtccctacgcgtccttcaccctttgaatattct
tgtgcatatctgtgtatcctggtgcacgttggttgcagtgtctgccatca
tgctcttaccgctttctcatacacctgttgcatcattccacactcatcga
acagACACAGGAAGGCTGCTGCTTGCCGTCGTTCTTTTTCCTTCCTTTGG
CTTTGACTGTGTGATACGTCGTCTGGGAATCAAGATAGACGCCACCGGCA
CAAAAGCGCAGGATTGAAGCCAGGTCCAAAGGCGTGGGGCCCGTTGGATT
CGGCCGCAGCGGGGAAAGGGTGAGCAAGATTCACCTCTTAGCTTCGACAC
CCTAAACCTCAAGCACGCCGCGGCGAGTAGCAATAGCATTGCAGACTGCA
GCAGGAGTGGTGATAAATTTAAGTGGCAGCAACATTAATAGTCATCATCG
TAGCAAGAGGCAGGACCAGCCGCAAGCAACCGCCGTCTCATTTTTGTGGT
CACGCGTCAGCAGCCGCAAGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGGATAGCCACGACAGGTACCACAACCAAGAAGTCA
GCGGCATCACCAGCATTATCGGGGGAGCATGCTCTTGTCCAGTAGAATAA
GAAAGAGACCCGAAGCACCGACACCGGCGTCACCACCTCTGGCAGCGGAT
AGCCACAGGAGGTGTGGGAGTACTCTCCTCCCTTCATCCTCCTCATCGTC
CTTCCTTCTTCTCCTCCTTCTCCTTCTAGCTACCGCCGCTTCCACTGGCG
CCTTTCTCGTCCTTCCCCCTAGTTTCAGCCATTACCAGCAGGTTTTTTCC
AGGAATGCACCTTATTCTTCCTCCTCCCCCTCCTCCTTGTCCACCGCACA
TTACCCCCTTTATGCGATCCCGCCCCCCTCCTCCGAAAACAAACGCCCTT
CTTCCTCCTCCTCGAGCAGCAGCAAGAGCAACGAGGACCTAAATCTTCTC
CTCTTAGAGGTGGAAAAAATGCAAAACAAGGCCTTTCGGGAGATAGGAAT
TCTGGGTCGACCCCTCCCTCCCCTGCTCCTCGAGAAACTCAAGACAGACG
GCAGGCTAGGCACGGCTGCCGAGCGGGACGCCTTGCAGAAGGCAGAAGAG
GTGAGCCCTATGAGCAGTGAGGGACAGAGGGGGATGATGGAGGCGTTACG
GCTTAGGGCTATGGCAAAAAAGCTGAGAGCAGAGGCTGATTTGGCGGAAG
TAGAGATGGCGAATGAAAAAGTAAACCAAACGATGAGAGGGTTATTGGAA
GGGGTGGATGTGGGGATGGTGCTTGTTAATTCCCCTAGGGGTGGAAGGGG
AGGGTGGGAGGGTGAGAAAGAAGAAGGACAGTTGGTAGCGATGGAGGTAG
CACGGAAGGCTTTTGCAAGGATTCTGGGGTTGGAGGGGACTATGGCCCCG
CCCTTGTCGACCGTTGAGAGGAAGATGGGGGAGGTGGATAGCGAGGAGGG
AGGGGGGGTATGGAGGGGGGGAGAAGAGAGGAGACCGAGCTGGGTCCGGG
GGGAGGATATGTGGGACGAGGACTTGCCAGATTTGAGTATCCGGGGAGAG
GAGGGAGGGGGGCAGGGAGGGGTAGCCAAGAAGGCAGCGATGGAGAGGAA
GAGAGTAAAGAGGGAGCAGGAAGAGGAGCGAGAGAGGGATAAGGAAGACG
CGGCGTTGATCGGGCGGGGAGGAGGGGAGGGAGGGGGGGAGGGAGGGCGG
GAAGGAGGGCGGGGGAGGGACGAAGATTTGTCGGCGCGTGTCCAAAATGA
CTTCATGCGAGAGGCTGAAAAGGCTGCAGCAGAGCAGCAGCAGCAGCGCA
CGCAGGATGACGAGGAGGTTCAGAGACTTGTTGGTTCGTCCTCCACCTCC
TCCTCCTCCGACAAGGATCGAACCACCACCATTGAGATCTCCTTCGGCAC
CGGCCAATCAGAGCAACAACCACAAGAACCCGCCCAGGACGAAAAGGAAG
GAGAGGACGAAACCTTTTACACCCTCTCCGTCGACAACAATGCCTCCTCC
CCCGGCTCTTTCAGCTTCAACAAGAGCGACTCCAACCCCATTGGACTTCT
CGCCTATGAGCTGGTGGGGACGCAGGAGCCTCTGCCAGGGATACCTGACG
TGGTTTTTCGTAGGATCCGTCGGAAGGAATTGAATGCAGACGAGTCGTTC
CAACGGGCCATGGGTGCATTTCAACGCATGATGGACACGACGGAGGGAGG
CGAGGGAGAGGGAGGGGGGGTGGAGGGAGGGATGGACGGGGATGCGTCCT
TGTTGGCCAACTCGTTGAATCCCTCGCCATTGGGCGTTAATCTGACAGCG
ATTATGTTGGAGGAAACAGACGCGGGCAAAGTGAAGGACGGGCTGCTCGA
GGGGTTCCTGCAATCTATCTTTCCTACGGCTCAGGAAGGGGGGTTGGGAG
GGGAGGGAGGGGAAGGGAAGGAGGAAGTGCCGCCTCTGCCGGAAGATACC
TGGCATACGATCAGATCCGAGGTATTTGGTAAGACCGCTGGGGGCGCCTT
CTCGCTGAATTATGTGGTTGATTTCGATTCCAAGTTTCACGTGATGGTGG
GGGAGATCGGGGAGGGTCCCTCGGGCGCGACGTTAAACACCCAGGCGTTG
CGTCAAGTGTTGGAGAAGAGATTGGATTATTTCAATCTGACGGAGACTGT
GTCGTTGTTCTTTTTGCGATTTCCTCCCGAGACCCTGTTTGAGTTGGAAG
ACATTGCTATGGACGCGGCGATGGACCAGTTTGATGAGAATGGAGGGCCG
CCGGAGGGAGGAAAGGGAAACCGTCAGGGAAAGCGGGGGGGGGCACGTAT
GGATGAGGACGATGGGCTGGACGGGTCAGATTTGCAGTTACTGGGGGAGT
TAGTTCCTCGGTTTTTGGGCAAACTGGCTCAGGGTCGATTTGCTATTCTG
GCCGTGGCGAAACGGGACGCGCCTGACGATTCTAGTGTGTTGGACGATCC
GATTGTGCGCCTGGCGACCGTTGCGATGGGATCTGTGTTGCAGACTTCGG
AGACCTTGCGCTATGTCTCTCCACCGCTGTTTGAGCGGCTGGACCAGGAC
CTGCCCGGCTTTGTGACACACGCATCCGAGTTTCCAGCGCTGACCCAAGG
TGTGCCTCCTGTCCTCTTTCCCTTTTTGGGACTGATTGTCGCGCATGAAG
CTGGACACTGGCTGGCCGCAAAGCGCTCGAATATGGAGCTGGGCCCGTTT
GTGCCTCTGCTTGATCCCTGGTTTGGCTACTTTGGAAGTTTGACTCAACT
AAAATCGTACCCGCCCACGCGCAAGGCGTTCTTTGACGTGTCGGCTGCGG
GACCCTTGTTAGGATCCCTGGTGAGTTATGCGGCGCTTGCGGGTGGGCTG
TGGCTGACCAAGTTGGGAGTGTTGCCGTCGGGGGGTGAGTTCGCCCCGGC
GTTGCCCCTGTCGTTGCTGCAGGCGTCGACCTTTGTAGCGGAGATGACGA
ACGCCTTCTTGCCGGGAGCCTTTGCGGTTGTGGACCCCGAGCATGCAGCC
CTCACGCTGCATCCGTTGGCGCTGGCGGGGTATTGGGGCGTGATGTTTAA
TGCACTGAACCTCTTGCCTATGGGTCGCTTGGATGGGGCACGTATGGTGG
AATCGCTTCTGGGAAAGCGCACGGCGTCGGCAGCCTCGACTTTTACGTTT
TGGGGGACCATTGCCGCGGGTATTTGGCAGAATCGGTTGGACCTGTTTTT
TGCAGGAATCGTAGTGCGCTTGTTTTGGTATCGCAAGGCCGTGCCGTGTC
TAGATGAGGTGGAGGAAGTGAGTGGAGACAGGTATTTCCTGGGCGTGGCG
GGATTGATATTGATGCTGGGCGCCTTGATACCGGCGACATCGATGTTCGC
GGGGGATAGTACGTACCTGTTGAATAATCTTTAGAGGAAGTGGAAGCAGG
AGTAAGGGGAAGTGTTTCAAGTATGACTGGAAAGAATCAGAGAGCAGAGT
ATAAAGAATTGAGGAAGATAGTAAGTCGGTGGAGAAAATGGTGAAAA
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protein sequence of NO12G03640.1

>NO12G03640.1-protein ID=NO12G03640.1-protein|Name=NO12G03640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1102bp
MLLSSRIRKRPEAPTPASPPLAADSHRRCGSTLLPSSSSSSFLLLLLLLL
ATAASTGAFLVLPPSFSHYQQVFSRNAPYSSSSPSSLSTAHYPLYAIPPP
SSENKRPSSSSSSSSKSNEDLNLLLLEVEKMQNKAFREIGILGRPLPPLL
LEKLKTDGRLGTAAERDALQKAEEVSPMSSEGQRGMMEALRLRAMAKKLR
AEADLAEVEMANEKVNQTMRGLLEGVDVGMVLVNSPRGGRGGWEGEKEEG
QLVAMEVARKAFARILGLEGTMAPPLSTVERKMGEVDSEEGGGVWRGGEE
RRPSWVRGEDMWDEDLPDLSIRGEEGGGQGGVAKKAAMERKRVKREQEEE
RERDKEDAALIGRGGGEGGGEGGREGGRGRDEDLSARVQNDFMREAEKAA
AEQQQQRTQDDEEVQRLVGSSSTSSSSDKDRTTTIEISFGTGQSEQQPQE
PAQDEKEGEDETFYTLSVDNNASSPGSFSFNKSDSNPIGLLAYELVGTQE
PLPGIPDVVFRRIRRKELNADESFQRAMGAFQRMMDTTEGGEGEGGGVEG
GMDGDASLLANSLNPSPLGVNLTAIMLEETDAGKVKDGLLEGFLQSIFPT
AQEGGLGGEGGEGKEEVPPLPEDTWHTIRSEVFGKTAGGAFSLNYVVDFD
SKFHVMVGEIGEGPSGATLNTQALRQVLEKRLDYFNLTETVSLFFLRFPP
ETLFELEDIAMDAAMDQFDENGGPPEGGKGNRQGKRGGARMDEDDGLDGS
DLQLLGELVPRFLGKLAQGRFAILAVAKRDAPDDSSVLDDPIVRLATVAM
GSVLQTSETLRYVSPPLFERLDQDLPGFVTHASEFPALTQGVPPVLFPFL
GLIVAHEAGHWLAAKRSNMELGPFVPLLDPWFGYFGSLTQLKSYPPTRKA
FFDVSAAGPLLGSLVSYAALAGGLWLTKLGVLPSGGEFAPALPLSLLQAS
TFVAEMTNAFLPGAFAVVDPEHAALTLHPLALAGYWGVMFNALNLLPMGR
LDGARMVESLLGKRTASAASTFTFWGTIAAGIWQNRLDLFFAGIVVRLFW
YRKAVPCLDEVEEVSGDRYFLGVAGLILMLGALIPATSMFAGDSTYLLNN
L*
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Synonyms
Publications