NO12G03530, NO12G03530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03530 vs. NCBI_GenBank
Match: EWM25692.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 604.4 bits (1557), Expect = 3.500e-169 Identity = 302/345 (87.54%), Postives = 321/345 (93.04%), Query Frame = 0 Query: 192 SFRFPFFRPSLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKPLREGGREGGMAAGWEGMKAWARRRVPSLAPGSESPLSEPPLSEIFDEIEDAN 537 SF F F P+LPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKG+ EL+NLN QILTRGAGAQFALSLPHGALAFAVLEATK+TLSSWFPV FAGPAFDFVSSAVSTT+CSVISTPQMVLTDRIMAGYYPNL++GV TV+K DGV+GLYAGWFAALAQKIPSYGLTWVFFQQLK+AR RW++HEATN ENFGMGA AAAATVCVMIPLDTVKTRIVTQAANP AGVHYKGV DCF+RVL+EEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEK RE REGG GW+ +KAW RR+VPSLAP S+SPLS+PPLSEIFDEIEDAN Sbjct: 201 SFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERREGG---GWDAVKAWGRRKVPSLAPESDSPLSQPPLSEIFDEIEDAN 542
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBN76640.1 (Putative mitochondrial carrier protein PET8 [Ectocarpus siliculosus]) HSP 1 Score: 318.9 bits (816), Expect = 2.900e-83 Identity = 165/273 (60.44%), Postives = 206/273 (75.46%), Query Frame = 0 Query: 211 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGS-AELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPE 483 LTFWG M+AGAVSRS AQT++HPANV+KTLLQTKGS + L + L+RGAGAQF LSLP+GAL FAVLE TK+ ++ FP+ A DF S + +T LCSV+STPQMVLT+RIMAG YPNL GV ++++ G RG YAGW+ L QKIPSYGLTWV FQQ+K R +N ENF +G AAA +V +MIP+DTVKTR+VTQ++ + V Y G+ +CFTR+LREEG+ +FY L+PRLVSVVPMIG+Q+ VYEFMKR +A +PE Sbjct: 125 LTFWGCMVAGAVSRSVAQTSLHPANVIKTLLQTKGSFRAILPLTWTTLSRGAGAQFLLSLPNGALHFAVLENTKSRMAEMFPLKTASFLLDFASCSAATALCSVMSTPQMVLTNRIMAGVYPNLWTGVRSIIQEKGARGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYRMAKRLPSNTENFWLGCIAAAGSVTIMIPMDTVKTRLVTQSS--ASTVMYSGIFNCFTRMLREEGVTSFYNSLSPRLVSVVPMIGVQYLVYEFMKRLMAEVPE 395
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBJ30331.1 (mitochondrial energy transfer protein [Ectocarpus siliculosus]) HSP 1 Score: 312.0 bits (798), Expect = 3.600e-81 Identity = 169/277 (61.01%), Postives = 203/277 (73.29%), Query Frame = 0 Query: 217 MLAGAVSRSCAQTAMHPANVVKTLLQTKGSA-ELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGF---AGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAG-VHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTI---AGMPEKPL 486 M AGAVSRS AQT M PANVVKTLLQ +G+A +LSNL+F++LTRGAGAQF +SLPHGA +A LE + FP + AGP DF+SS+V+T +CSV+STPQMVLTDRIMAG YPNL +GV + + G+ G Y GW A +AQKIPSYGLTWVFFQQ K + + TN ENF +GA AA ATVC+MIP+DTVKTR+VTQ A AG V YKGVL TR++REEGL Y L PRLVSVVPMIGIQFG+YEF+++ + G +KPL Sbjct: 1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTA--QAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKELMNRKGEEKKPL 275
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CEM38396.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 285.4 bits (729), Expect = 3.600e-73 Identity = 157/290 (54.14%), Postives = 200/290 (68.97%), Query Frame = 0 Query: 201 SLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL---NFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVH-YKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKPLR 487 SLP LH LTFWGNMLAGA+SRS AQTA+HP VKTLLQ + + + + I RGAGAQF +SLPHGA+ FAVL K ++ P+ AG FDF S A +T LCSVISTPQMVL DRI+ G YPNL++G+S +++ +GVRGLY GWF + QKIPSY LTWV +QQL+ + + ++AENF +GA AA V +MIP+DTVKTR+VTQA + V YKG++DCF RV++EEG+ Y L RL+SVVPMIGIQFGVYE++K + P ++ Sbjct: 105 SLP-LHDKGKLTFWGNMLAGALSRSVAQTAVHPLIGVKTLLQGRNTWQGWGYFLGHPGIWWRGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPIKQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAGIVVAIMIPVDTVKTRLVTQAT--LGAVQPYKGIIDCFLRVIKEEGVGRLYRALPMRLMSVVPMIGIQFGVYEYVKSRLLSDPHMAVK 391
BLAST of NO12G03530 vs. NCBI_GenBank
Match: OEU09974.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 282.3 bits (721), Expect = 3.100e-72 Identity = 155/287 (54.01%), Postives = 190/287 (66.20%), Query Frame = 0 Query: 209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQ-TKGSAELSNLN------FQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVG--------FAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGM 481 + L FW +M++GAVSRS AQT MHPAN +KT++Q T G + L+ + F+ L+ GAGA F LSLPHGA FAVLEA + +SS GP DF+SSA++T CSV+STPQM++TD IMAG YPNLI+ S + GV G Y GW+ L KIPSY LTW FFQQLK R + A N EN MG A+AA VC+MIP+DT+KTR+VTQ A + YKG++DC RV REEG+ TFY L PRL+SVVPMIGIQFGVYE MKR + M Sbjct: 84 RPLYFWESMVSGAVSRSIAQTVMHPANTMKTMMQSTVGPSRLTLRDLIKPQMFRRLSVGAGANFILSLPHGAFNFAVLEAVRAQMSSLVESNPKLERNKEKMGPGLDFISSAIATICCSVVSTPQMMITDNIMAGNYPNLISASSGLYTDRGVMGFYTGWWPGLVGKIPSYALTWTFFQQLKRVRNIMSDRPAKNYENTIMGCVASAACVCIMIPMDTIKTRLVTQVA-MKGNIPYKGIIDCGLRVAREEGINTFYRGLTPRLMSVVPMIGIQFGVYEAMKREVTKM 369
BLAST of NO12G03530 vs. NCBI_GenBank
Match: XP_002286310.1 (mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335] >EED95951.1 mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 275.8 bits (704), Expect = 2.900e-70 Identity = 150/271 (55.35%), Postives = 183/271 (67.53%), Query Frame = 0 Query: 213 FWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GSAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVG-FA-------GPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYE 472 FW M+ GA+SRS AQT MHPAN +KT+LQ+ G LSN LTRGAGAQ LS+PHGA+ FAVLE + +++ +A GP DF+SSA+ST CSV+STPQM++ D IMAG YPNL+ + +MK GV G Y GW+ +A KIPSYGLTW F+Q+K RTR A + EN MG A+A TVC+MIP+DTVKTR+VTQ P V YKG+ DCF RVL+EEG+ FY L PRL+SVVPMIGIQFGVYE Sbjct: 1 FWEAMICGAISRSAAQTIMHPANTMKTILQSSRSVPGKTPLSN-----LTRGAGAQLILSIPHGAVNFAVLEFVRRQMNNVVSQSRYADAINRNFGPGMDFLSSALSTICCSVVSTPQMMICDNIMAGTYPNLVAATNGLMKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRVRTRMFKRPAKDIENSIMGCIASATTVCIMIPMDTVKTRLVTQMNYPDL-VAYKGINDCFRRVLQEEGIGAFYRGLTPRLLSVVPMIGIQFGVYE 265
BLAST of NO12G03530 vs. NCBI_GenBank
Match: GAX26310.1 (hypothetical protein FisN_16Lh148 [Fistulifera solaris]) HSP 1 Score: 271.6 bits (693), Expect = 5.400e-69 Identity = 154/292 (52.74%), Postives = 185/292 (63.36%), Query Frame = 0 Query: 199 RPSLP-----ALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL----NFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSW-----FPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWL-NHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKR 476 RP+ P L + L FW NM+ GA+SRS AQT MHPAN KTLLQ+ L F L+ GAGA LSLPHGA+ FAVLEA + L P F PA DFVSS +ST CS +STPQMV+ D IMAG YP+L ++ + + GV G Y GW L KIP+Y LTW FFQ+ K R R + + A+N EN MG+ A+A TVC+MIP+DT+KTR+VTQA + YKG++DC VLREEGL +FY L PRLVSVVPMIGIQFGVYE MKR Sbjct: 110 RPARPTSQKTTLATIRPLVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKRFDTPAHF-DPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKR 399
BLAST of NO12G03530 vs. NCBI_GenBank
Match: GAX29412.1 (hypothetical protein FisN_16Hh148 [Fistulifera solaris]) HSP 1 Score: 270.4 bits (690), Expect = 1.200e-68 Identity = 148/276 (53.62%), Postives = 179/276 (64.86%), Query Frame = 0 Query: 209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL----NFQILTRGAGAQFALSLPHGALAFAVLEATKTTL----SSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWL-NHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKR 476 + L FW NM+ GA+SRS AQT MHPAN KTLLQ+ L F L+ GAGA LSLPHGA+ FAVLEA + L + PA DFVSS +ST CS +STPQMV+ D IMAG YP+L ++ + + GV G Y GW L KIP+Y LTW FFQ+ K R R + + A+N EN MG+ A+A TVC+MIP+DT+KTR+VTQA + YKG++DC VLREEGL +FY L PRLVSVVPMIGIQFGVYE MKR Sbjct: 98 RPLVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKQFHTPAHFDPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKR 372
BLAST of NO12G03530 vs. NCBI_GenBank
Match: EJK75966.1 (hypothetical protein THAOC_02295 [Thalassiosira oceanica]) HSP 1 Score: 268.5 bits (685), Expect = 4.600e-68 Identity = 149/281 (53.02%), Postives = 187/281 (66.55%), Query Frame = 0 Query: 209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GSAELSNLNF------QILTRGAGAQFALSLPHGALAFAVLE---------ATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVY 471 + L FW M+ GA+SRS AQT MHPANV+KT+LQ+K G A L+ +F Q L+RGAGAQ LSLPHGA+ FAVLE +K+ + F G DF+SSA+ST CSV+STPQM++ D IMAG YPNL + S ++K GV G Y GW+ +A KIPSYGLTW F+Q+K R + A + EN MG A+A TVCVMIP+DTVKTR+VTQ+ P V Y+G+ DCF R+++EEG+ FY L PRL+SVVPMIGIQFGVY Sbjct: 92 RKLAFWEAMVCGAISRSTAQTIMHPANVMKTILQSKRTIPGQAPLTVASFTQWRYAQKLSRGAGAQLLLSLPHGAVNFAVLEFVRRQMHGLVSKSPYAEQINRNF-GAGMDFLSSAISTVCCSVVSTPQMMICDNIMAGTYPNLASATSNLIKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRIRATISDRPAMDLENSIMGCIASATTVCVMIPMDTVKTRLVTQSKFPDL-VPYEGINDCFRRIMQEEGVGAFYRGLTPRLLSVVPMIGIQFGVY 370
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBJ32170.1 (mitochondrial energy transfer protein [Ectocarpus siliculosus]) HSP 1 Score: 225.3 bits (573), Expect = 4.400e-55 Identity = 119/230 (51.74%), Postives = 155/230 (67.39%), Query Frame = 0 Query: 241 LQTKG-SAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGF---AGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQ 467 +Q +G SA+LS+L+ ++L RGAGAQF +SLPHGA +A LE + +FP + AGP DFV+S V+T LCSV+STPQ+V+ DRIM G YPNL++G + + +G+RG Y GW A ++QKIPSYGLTWVF+Q K + + T E+F +GA AA VCVM+PLDTV TR+VTQ A P V YKG R++ EEGL Y+ L +LVSVVP IGIQ Sbjct: 1 MQGRGTSAQLSSLSLKLLRRGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQP-GFVPYKGAFRTLGRIVNEEGLGAMYSSLPAKLVSVVPAIGIQ 229 The following BLAST results are available for this feature:
BLAST of NO12G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03530 ID=NO12G03530|Name=NO12G03530|organism=Nannochloropsis oceanica|type=gene|length=1611bpback to top protein sequence of NO12G03530.1 >NO12G03530.1-protein ID=NO12G03530.1-protein|Name=NO12G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=537bpback to top Synonyms
Publications
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