NO12G02990, NO12G02990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02990 vs. NCBI_GenBank
Match: EWM25739.1 (component of the counting factor complex [Nannochloropsis gaditana]) HSP 1 Score: 356.3 bits (913), Expect = 1.500e-94 Identity = 173/252 (68.65%), Postives = 200/252 (79.37%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKFVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAAWKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEG 254 +YLRSDDDPS+RTEMSGEAL++ MF+AR+ ++TL+WHTGDFALDEIAPNHNVCPAL VE +A S EWA YN S V+EL+ARM ELPGY +E++LDCLGTT CTGR FPP+LT TL DAFVH+A RSFKF WN+AYYSKLGIGPLA ELLENM+ RA GGR+ LKFGLFLGHDTSVLPLLAAW VWDG WPPYAA+L +ELY A G G EG+ K H FRMLY G+EL++E C+G Sbjct: 169 LYLRSDDDPSFRTEMSGEALVQSMFEARREDVTLRWHTGDFALDEIAPNHNVCPALSGVEREAMASAEWAAYNQSAAVRELDARMERELPGYQWEHMLDCLGTTVCTGRAFPPSLTHRTLADAFVHAARTRSFKFAWNDAYYSKLGIGPLARELLENMQARA------GGRSHLKFGLFLGHDTSVLPLLAAWGVWDGAWPPYAAVLAVELYAADGTG-----HGGVEGEGK-HFFRMLYGGRELILEECQG 408
BLAST of NO12G02990 vs. NCBI_GenBank
Match: GAX14564.1 (lysosomal acid phosphatase [Fistulifera solaris]) HSP 1 Score: 133.3 bits (334), Expect = 2.000e-27 Identity = 92/276 (33.33%), Postives = 148/276 (53.62%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMF-DARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKF---------VWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAAW-KVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELV--MEGCEGEA-LCPFSVLE 264 +Y R+DD+ RT MSG LL+G+F + +T+ HT D+ D + N NVCP L + + E+ ++N S Q+L +L ++ LDC TT CT R P + + +D S ++R F + N+A YSKL +GPL E+++N+ R A E T + LF GHDT+++ LLA+ KV+DG WPPYA+ L++E++E ++G R+ + + FR++Y G+ L +EGC +A +C ++L+ Sbjct: 190 LYYRADDE--QRTLMSGRVLLKGLFGNEVTSSLTIPMHTADYERDIVGENENVCPRLTQLRELFYLTDEFRQFNASVEAQQLRDFQRRQL-RTDHDLELDCFMTTICTDRMLPDAINDYAGEDQ-TESMFLRLVNFYIRQYTSFAMANDAEYSKLAMGPLWAEIMDNV-DRVIA---ENDDTYPRLALFSGHDTTIIGLLASLSKVYDGSWPPYASKLLLEIHEIDLDG-----RKDKSLYTTGYGFRLIYNGQVLTDKVEGCPKDAHICDVAILK 452
BLAST of NO12G02990 vs. NCBI_GenBank
Match: CEM39194.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 129.4 bits (324), Expect = 2.900e-26 Identity = 94/306 (30.72%), Postives = 149/306 (48.69%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEM------------TLQWHTGDFALDEIAPNHNVCPALDSVEADASHS---REWAEYNNSQWVQELNARMAVELPGYSYEY---LLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWM-----RSFKFVWNEAYYSKLGIGPLALELLEN-MRGRARARGREGGR----TALKFGLFLGHDTSVLPLLAAWKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKEL--VMEGCEGEA-LCPFSVLETATEKWAFASGDP 277 +Y RSDD RT +SG LL R+GE L HTGD+ LD + PN +VCP L ++ A +S ++W + + + V E + R ++ G +Y + L+DCL T CT P L E + F + +F N+A YSKL P+ ++ + +G + A+ + GG TA L+ GHDT+++P+LAA WDG+WP YA+I+++ELY D +E FR++Y G+ + +++GC+ + LC + + T +FA P Sbjct: 232 VYFRSDD--VQRTLLSGATLLTYFLKGREGETEQEAGEIVSDHPVLHVHTGDYRLDTMYPNDDVCPRLKELKHAARNSEPCKQWRDSDEQKAVLE-SLREIPDIGGPNYHFSHHLMDCLFTATCTEHRVPRGL-EWSADSLFARYVGQVEKEEAACRFSANDAAYSKLAATPVIHDMRQKAAKGLSEAQRKSGGERSPPTAPHIALWSGHDTTLMPVLAAMGAWDGKWPSYASIIILELYTV-------------GADSREAYFRLIYNGEVITSMIKGCDPQQDLCSYDHFDAVT---SFAKDGP 517
BLAST of NO12G02990 vs. NCBI_GenBank
Match: GAX22094.1 (lysophosphatidic acid phosphatase type 6 [Fistulifera solaris]) HSP 1 Score: 129.4 bits (324), Expect = 2.900e-26 Identity = 90/273 (32.97%), Postives = 145/273 (53.11%), Query Frame = 0 Query: 5 RSDDDPSYRTEMSGEALLRGMF-DARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKF---------VWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAAW-KVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELV--MEGCEGEA-LCPFSVLE 264 R+DD+ RT MSG LL+G+F + +T+ HT D+ D + N N+CP L + + E+ ++N S Q+L +L ++ LDC TT CT R P + + ++ S ++R F + N+A YSKL +GPL E+++N+ R A E G + LF GHDT+++ LLA+ KV+DG WPPYA+ L++E++E ++G R+ + + FR++Y G+ L +EGC + +C SVL+ Sbjct: 172 RADDE--QRTLMSGRVLLKGLFGNEVTAPLTIPMHTADYERDVVGENENLCPRLTQLRELFYGTDEFRQFNASAEAQQLRDFQRRQL-HTDHDLELDCFMTTICTDRTLPDAINDYAGEEQ-TESMFLRLVNFYIRQYTSFAMANDAEYSKLAMGPLWAEIMDNV-DRVIA---ENGTAYPRLALFSGHDTTIIGLLASLSKVYDGSWPPYASKLLLEIHEIDLDG-----RKDKALYTTGYGFRLIYNGQVLTDQVEGCPKDTHICDVSVLK 431
BLAST of NO12G02990 vs. NCBI_GenBank
Match: XP_009838149.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV72467.1 hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 127.1 bits (318), Expect = 1.500e-25 Identity = 88/276 (31.88%), Postives = 123/276 (44.57%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEY-NNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFK-FVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAA--WKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEALCPFSVLETATEKWAFAS 274 I+L S D +RT MSG+ ++ MF + WH GD AL PN CP L ++A S + + N V +L Y L DCL T+ C+ P L ++ D V + K +V ++A Y+K I + L + M R R GG +F L+ GHD +V+PLLAA W +WPPYAA L ELY E + H R +Y+G+ L + GC+ + LCP V T AFA+ Sbjct: 189 IFLSSTD--MHRTVMSGQLVVDAMFPPPSSSAVVPWHVGDIALSSYVPNPTACPKLVEIKAQFEASPGYVAWMANQSAVVDLT---RATFQSYDARMLFDCLVTSRCSQPQSLPHLLSSSHYDQIVTYERDKRMKIYVDSDAVYAKASIAKVMLAIRNRMLLRVR-----GGANTSRFALYSGHDDTVMPLLAALGGSQWLQDWPPYAAYLSFELY---------------ENNSGSHFVRFVYQGQPLTVPGCQDDKLCPLDVFTNMT---AFAT 436
BLAST of NO12G02990 vs. NCBI_GenBank
Match: XP_008867799.1 (hypothetical protein H310_04983 [Aphanomyces invadans] >ETW03570.1 hypothetical protein H310_04983 [Aphanomyces invadans]) HSP 1 Score: 124.0 bits (310), Expect = 1.200e-24 Identity = 82/270 (30.37%), Postives = 123/270 (45.56%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMF-DARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEAD-ASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACT-GRPFPPTLTETTLQDAFVHSAWMRSFKFVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAA--WKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEALCPFSVLETAT 267 ++L S D +RT MSG+ ++ MF R + WH GD AL PN CP L ++A S R A N V EL Y L DCL T+ C+ + P L+ + + F + R K + Y+K+ + + L + + R +G T +F L+ GHD +V+P+LAA W +WPPYAA L ELY +K G H R +Y+G+ L++ GC+ ++LCP + + T Sbjct: 177 VFLSSTD--MHRTVMSGQLVVDAMFPPTRPSSALVPWHVGDIALSSYVPNPTACPKLAEIQARYESSPRYTAWLANQSHVVELT---KATFQSYDPSVLFDCLLTSRCSQPQSLPDWLSPSHYNEIFTYERDKR-MKIYLEDPSYAKVSMAKVILAIRNRILSRV-----DGNSTGPRFALYSGHDDTVMPVLAALGGAEWLQDWPPYAAFLSFELYASKAGG---------------HFVRFVYQGQPLLLPGCQSDSLCPLELFKNLT 420
BLAST of NO12G02990 vs. NCBI_GenBank
Match: XP_002908814.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57628.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 122.1 bits (305), Expect = 4.700e-24 Identity = 85/279 (30.47%), Postives = 133/279 (47.67%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMTLQ------WHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKFVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAA--WKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEALCPFSVLETATEKWAFA 273 IYLRSDD RT SG+AL+ G+F G M+LQ W+ D ++D I N N+CP + + ++ S E+ + E+ + +S+ L+CL T C G P + E T + +S +N+++Y+KL + PLA ++L + G G A K + + HD++++P LAA + WD W PYA +LVIE+Y+ K SG H RM++ G+ + C + LC +E E +AFA Sbjct: 174 IYLRSDDQE--RTLGSGQALIDGLFPV-DGTMSLQLHRMLMWNVADISVDYINANENICPFMGHIGELSNESPEFWAHLRDPVTVEIEHHFNDLVGNFSWSSALECLSTARCNGLELPTGIDEETFTKTYHEVEVRQSIFLTYNDSWYAKLAMQPLAHDMLTRLDGVL-----IGDSDAYKLSVTMAHDSTIMPFLAASVKENWDRLWTPYAGMLVIEVYKTK-----SG----------SHAVRMIFHGEPQHIPECR-DTLCD---IEEFIEAFAFA 425
BLAST of NO12G02990 vs. NCBI_GenBank
Match: CCA16101.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 119.8 bits (299), Expect = 2.300e-23 Identity = 78/263 (29.66%), Postives = 123/263 (46.77%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMT-----LQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKFVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAAW--KVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEALC 258 IYLRSDD RT SG+ L F E T L W D++ D I N N+CP + + +S S+ + ++ S V EL R + +S+ +L+CL C P P + + + + +N+++YSK+ + PL +++ N+ A +E + K +F+GHD +++P LAA + W+ W PYAA V+ELY+ SG H R LYRGK + + C+ +LC Sbjct: 178 IYLRSDDQE--RTLGSGQVLFDAFFPPDASESTLLDDLLTWRVADYSTDHINANENICPIMRYIADLSSTSKTFHDHITSLPVVELEERFTASVGNFSWNTVLECLSVARCNNLPLPNGVDGALFTKIYQEVEFRQGLFLTYNDSWYSKVAMQPLFRDMINNLDD---AIAKE--QDYAKLAIFMGHDATLMPFLAALQRENWNRSWTPYAAAFVLELYKT-----TSG-----------HAVRPLYRGKPIKIPECQ-NSLC 416
BLAST of NO12G02990 vs. NCBI_GenBank
Match: XP_009838148.1 (hypothetical protein H257_12584 [Aphanomyces astaci] >ETV72466.1 hypothetical protein H257_12584 [Aphanomyces astaci]) HSP 1 Score: 119.0 bits (297), Expect = 4.000e-23 Identity = 82/259 (31.66%), Postives = 115/259 (44.40%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMTLQWHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEY-NNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFK-FVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAA--WKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEAL 257 I+L S D +RT MSG+ ++ MF + WH GD AL PN CP L ++A S + + N V +L Y L DCL T+ C+ P L ++ D V + K +V ++A Y+K I + L + M R R GG +F L+ GHD +V+PLLAA W +WPPYAA L ELY E + H R +Y+G+ L + GC+G L Sbjct: 189 IFLSSTD--MHRTVMSGQLVVDAMFPPPSSSAVVPWHVGDIALSSYVPNPTACPKLVEIKAQFEASPGYVAWMANQSAVVDLT---RATFQSYDARMLFDCLVTSRCSQPQSLPHLLSSSHYDQIVTYERDKRMKIYVDSDAVYAKASIAKVMLAIRNRMLLRVR-----GGANTSRFALYSGHDDTVMPLLAALGGSQWLQDWPPYAAYLSFELY---------------ENNSGSHFVRFVYQGQPLTVPGCQGPTL 422
BLAST of NO12G02990 vs. NCBI_GenBank
Match: XP_009529886.1 (hypothetical protein PHYSODRAFT_560654 [Phytophthora sojae] >EGZ16137.1 hypothetical protein PHYSODRAFT_560654 [Phytophthora sojae]) HSP 1 Score: 117.5 bits (293), Expect = 1.100e-22 Identity = 84/294 (28.57%), Postives = 137/294 (46.60%), Query Frame = 0 Query: 2 IYLRSDDDPSYRTEMSGEALLRGMFDARQGEMTLQ------WHTGDFALDEIAPNHNVCPALDSVEADASHSREWAEYNNSQWVQELNARMAVELPGYSYEYLLDCLGTTACTGRPFPPTLTETTLQDAFVHSAWMRSFKFVWNEAYYSKLGIGPLALELLENMRGRARARGREGGRTALKFGLFLGHDTSVLPLLAA--WKVWDGEWPPYAAILVIELYEAKVEGEESGERRGQEGDQKEHLFRMLYRGKELVMEGCEGEALCPFSVLETATEKWAFASG-----DPKRPCQK 283 IYLRSDD RT SG+AL+ G+F G ++L+ W D ++D I N N+CP + + ++ S E+ + E+ + +S+ L+CL T C PP + E T + + +N+++Y+K+ + PLA ++L + G G A K + + HD++++P LAA + W+ W PYA +LVIE+Y+ K SG H RM++ G+ + C + LC +E ++ +AFA D K P QK Sbjct: 175 IYLRSDDQE--RTLGSGQALIDGLFPV-DGTLSLELHRMLSWDVADISVDYINANENICPFMGHIGQLSNESPEFWNHLRDPATVEIEHHFNDLVGNFSWGSALECLSTARCNDLELPPGIDEETFTKTYHEVEVRQGIFLTYNDSWYAKVAMQPLAHDMLTRLDGVL-----NGDADAYKLSVTMAHDSTIMPFLAASVKENWNRTWTPYAGMLVIEVYKTK-----SG----------SHAVRMIFHGEPQQLPDCH-DTLCD---IEEFSKAFAFARNPRTEHDCKLPKQK 441 The following BLAST results are available for this feature:
BLAST of NO12G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02990 ID=NO12G02990|Name=NO12G02990|organism=Nannochloropsis oceanica|type=gene|length=2783bpback to top protein sequence of NO12G02990.2 >NO12G02990.2-protein ID=NO12G02990.2-protein|Name=NO12G02990.2|organism=Nannochloropsis oceanica|type=polypeptide|length=474bpback to top protein sequence of NO12G02990.1 >NO12G02990.1-protein ID=NO12G02990.1-protein|Name=NO12G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=674bpback to top Synonyms
Publications
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