NO12G02740, NO12G02740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02740 vs. NCBI_GenBank
Match: EWM25756.1 (dna excision repair protein ercc-6 [Nannochloropsis gaditana]) HSP 1 Score: 1054.3 bits (2725), Expect = 2.600e-304 Identity = 619/809 (76.51%), Postives = 684/809 (84.55%), Query Frame = 0 Query: 251 GKQKARGFLLVDDFADDDYEHRLDEYEAALRAMGG-SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAREPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFGXXXXXXXDGGRVDEEAPNDTAMEFMEGVVRRSDLKKRGERKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEHAKRIADRA 1059 G ++ +G L+VDDF +++Y RL+EY L A+G XXXXXXXX + P PGSR AQATARREG+ E E AGPL LPGGF LPA INRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGL RSGRL GG L+VAPATLMSQW SEL+AWAP LRVV+LHRSAAAFAAQP KV RFVR+VL G G+GR +VCL+TYESLKLLRKELL H WAYVALDEGQKIRNPDAE+T+CAKQLPT+HRLILSGTPIQNNL+ELWSLFDFCFPGRLGTLPAFETELATPIRLGG+SNA+P+QAQCAYRCALVLRDL+HPYLLRRMKKDIMTILP+PKKTEQVLFCKLT RQ+ALYRA ISSPEIRLI+EGKASHF+AITVLRKICNHADLVAGP+EEG +LM+R+VAGGGWADE XXXXXXXXXXXXXX R AL VT G V RSGK+QVLA VLPRW +QGHRVLLFSQTRQMLD+LER V+ +GW YLRMDG+TNVGARPA+IERFN D +F+FLLTTRTGGLGISLTGANRV+LFDPDWNPQTDIQARERAWRLGQ+R VTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVD KQKRLFSSGELKELFTL+EDF DEEAPNDTAMEFM+GVV+++D++ R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +KILRAVF+GRGL+S+LSHDVVE+G+RNTE+W++MQ A+++ADRA Sbjct: 3 GSRRRQGLLMVDDFLEENYRRRLEEYRVGLGALGSPGEATALDGDEDXXXXXXXXAAPASLSGGQAEGEVTSSPRPGSRGAQATARREGLGENEVAGPLALPGGFVLPASINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLHRSGRLEGGALVVAPATLMSQWVSELFAWAPRLRVVVLHRSAAAFAAQPGPKVSRFVRRVL----GMGRGR---AGLVCLSTYESLKLLRKELLNHPWAYVALDEGQKIRNPDAEVTICAKQLPTIHRLILSGTPIQNNLRELWSLFDFCFPGRLGTLPAFETELATPIRLGGYSNATPTQAQCAYRCALVLRDLVHPYLLRRMKKDIMTILPLPKKTEQVLFCKLTPRQQALYRAVISSPEIRLIVEGKASHFRAITVLRKICNHADLVAGPDEEGTELMARLVAGGGWADEWXXXXXXXXXXXXXXXXXXXXXXRE---ALASVTEGTMGAVCRSGKMQVLAAVLPRWARQGHRVLLFSQTRQMLDLLERFVRSRGWEYLRMDGSTNVGARPALIERFNQDTRVFVFLLTTRTGGLGISLTGANRVILFDPDWNPQTDIQARERAWRLGQRRPVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDAKQKRLFSSGELKELFTLREDFAG-----------DEEAPNDTAMEFMDGVVKKADVE---GRRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNKILRAVFKGRGLASVLSHDVVEAGRRNTELWMEMQARARQVADRA 787
BLAST of NO12G02740 vs. NCBI_GenBank
Match: CBJ29096.1 (SNF2 family protein [Ectocarpus siliculosus]) HSP 1 Score: 632.9 bits (1631), Expect = 1.900e-177 Identity = 404/971 (41.61%), Postives = 520/971 (53.55%), Query Frame = 0 Query: 107 EGEPTVSCPVCGRGVPVQDKTQPDAELSQHLDRCMRTSRRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDXXXXXXXXXXXXXXXXXXXXXXLKTEAPLSLRLPTG-----QRKAVTAAAVKDGKGKKKEK--QMIGGKQKARGFLLVDDFADDDYEHRLDEYEAALRAMGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAREPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQP--AYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED-----FGXXXXXXXDGGRV-----DEEAPNDTAMEFMEGVVRRSDLKKRGERKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEHAKRIADRA 1059 E V CPVC + V V D PD LS+H+DRC R++RRR+ XXXXXXXX V+ + L L TG +RKA A V + + + +++GG Q LVDDF D+D+E R + A G + +A EL G L I ++L+ +QRTGVRW+W+L+RQGAGGI+GDEMGLGKTVQVSAFLG L S +R LI+ PAT++S W +EL+ WAP LRVV+LHR AF A + K+ +R++L VV + +YE +K L+ LL W Y LDEGQ+IRNPDAE+T+ KQ+ TVHRLIL+GTPIQNNL+ELWSLFDF FPGRLGTLPAFE E A PIR+GG++NASP QA+ AYRCALVLRDLI PYLLRR KKD+ I+ +P KTEQVLFC+LT+ QR LY + S E++ +L F+AI +LRK+CNH DLV + V ++ GG +D + + + + +V RSGKL VL ++LP W KQGHRVLLFSQTRQML I+ER V W Y R+DG+T VG R +I+RFN DE++FI LLTTRTGG+G++LTGA+RV+LFDPDWNP TD+QARER+WR+GQ+R VT+YRLVT GTIEEKIY RQIFKTA++NRVL DPKQ+R+FS+ EL +LFTL +D F GRV +++ N E V R++ KK R+ + +L+A++EG LSS+ HD+ E R T +M+E AKR A RA Sbjct: 229 EKNAAVQCPVCAQMVTVDDPANPDICLSRHMDRCTRSARRRSCRQAGEARGLEKGSDASTRPRASSRGXXXXXXXXRGQDSDVNGGHLAAK----------------SRSSALVDHLGTGVTRAKRRKASGQAVVHGSESSETDAALKVLGGGQS-----LVDDFDDEDFETRKAQVVDLSVANGVGE-----------------------------------------------------DSLSANSAELGDGLILDDGIAQRLFQFQRTGVRWMWQLHRQGAGGIVGDEMGLGKTVQVSAFLGALHGSSVMR-RALILCPATVLSHWMAELHIWAPQLRVVVLHRCVQAFNAVSGNSGKLRALIRRIL-----------GWPEVVVVASYEGMKSLKAFLLPCNWDYCVLDEGQRIRNPDAEVTLICKQIRTVHRLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQARLAYRCALVLRDLIQPYLLRRQKKDLEDIIHLPAKTEQVLFCRLTSYQRRLYSEFLESTEVKSVLSRTMRAFRAIGILRKLCNHPDLVCRFGDSVVTRLASHQIWGGDSD---------------------ASEKEEDDTAEESKSDNDHEVQRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERFVVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGVGVNLTGADRVILFDPDWNPSTDMQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRRMFSADELGDLFTLGDDGASDGFTDTIDLFQGEGRVRFPQGEQQGSNSRRSEGASDVRRKNGRKKSPSRR---GNRVARRESASPSSSPLLGTATVTIAPASGDEERKSSVDGDQDSEKSKGDDNAVLQALYEGAPLSSVFHHDLAEGSGRMTMEQKRMEEAAKRAAQRA 1089
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002286143.1 (rad54-like protein, partial [Thalassiosira pseudonana CCMP1335] >EED95784.1 rad54-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 596.3 bits (1536), Expect = 1.900e-166 Identity = 305/573 (53.23%), Postives = 389/573 (67.89%), Query Frame = 0 Query: 346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGD---VARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 G + GG ++PA IN +L+ YQR G+RW+WELY GAGG +GDEMGLGKTVQVS+FLG + + R L+V PAT++S W SEL WAP LR +++HRS + + + + G G +V +TTYES++ W+YV LDEGQKIRNPDAE+T+ K+L T +RL++SGTPIQN+L+ELWSLFDF FPGRLGTLPAFE E A PI+ GG+SNASP Q Q AYRCA+VLRDLI+PYLLRR KKDI + MP KTEQVLFC+L+++QR+LY + S E+ ++ G KA+TVLRKICNH DLV GP+ +D + + D YGD V SGKLQVLA++LP W KQGHR +LF Q R+ L+I+E+ ++Q W + R+DGNTNV +R ++++FN DE+ F L+TTRTGG+G+++TGANRVV+FDPDWNPQTD QARERAWR GQK+ VT+YRL+T GTIEEKIYQRQIFKTAI+N+VL DPKQ+RLFS +LK+LFTLK D Sbjct: 15 GAVVYEGGLEVPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAM-AANRFIDSVLVVCPATMLSHWLSELAVWAPGLRRIMVHRSG---------ETDDYEEQGADAFCGTG--------IVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRDLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGSVQLLKAVTVLRKICNHPDLVVGPDGRTLDSVQEESSSDNDDD-----------------------------------GCFYGDERFVEVSGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKFARLDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQTDAQARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRLFSQKDLKDLFTLKAD 534
BLAST of NO12G02740 vs. NCBI_GenBank
Match: ORY79839.1 (SNF2 family N-terminal domain-domain-containing protein [Protomyces lactucaedebilis]) HSP 1 Score: 569.7 bits (1467), Expect = 1.900e-158 Identity = 307/591 (51.95%), Postives = 383/591 (64.81%), Query Frame = 0 Query: 327 SRAAQATARREGMME----GETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILER-LVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913 +RAAQ E M E T L GGF++P I+ L+ YQ+T V+WLWEL+ QG GGI+GDEMGLGKTVQV +FL GL SG+L G LIVAPAT+M W E + W P LRV +LH S A A G VRKV++ G V +TTY L R+ L AW+Y LDEG KIRNPDAE+++ AKQL TVHRLILSGTPIQNNL ELWSLFDFCFPGRLGTLP F + A PI +GG++NAS Q Q A++CA VLRDLI PYLLRRMK D+ +PKK+EQVLFCKLT +QR Y ++S E+ IL GK + VLRKICNH DLV + + L R +DYGD ++SGK+QV+ +L W+++GHR LLF+Q RQMLDILER +V +G+ Y RMDG T + R A+++ FNT+ +I +FLLTTR GGLG++LTGA+RVV++DPDWNP TD+QARERAWRLGQK+ VTI+RL+T+GTIEEKIY RQIFK ++N++L DPKQ+R F +L +LF+L Sbjct: 261 ARAAQGAGVDEDMDEVLQPHPTEPSLAFNGGFQIPGDIHPSLFDYQKTCVQWLWELHAQGCGGIIGDEMGLGKTVQVISFLAGLSHSGKLDGPVLIVAPATVMQMWVKEFHKWWPPLRVCILHSSGEATRA------GSNVRKVVQNVVNEGH--------VLVTTYAGLTSYREMLGPVAWSYAILDEGHKIRNPDAEVSLAAKQLRTVHRLILSGTPIQNNLTELWSLFDFCFPGRLGTLPIFHAQFALPINIGGYANASNVQVQTAFKCACVLRDLISPYLLRRMKADVAA--DLPKKSEQVLFCKLTDKQRTAYERFLASGEMEAILNGKRQVLFGVDVLRKICNHPDLV-----DRLQLQKR---------------------------------------------SDYGDSSKSGKMQVVKALLELWKREGHRTLLFAQGRQMLDILERYVVSLEGFNYRRMDGTTPIVQRQALVDEFNTNADIHVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDVQARERAWRLGQKKDVTIFRLMTSGTIEEKIYHRQIFKQFLTNKILRDPKQRRFFKMNDLHDLFSL 785
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002176801.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51264.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 565.8 bits (1457), Expect = 2.800e-157 Identity = 287/543 (52.85%), Postives = 374/543 (68.88%), Query Frame = 0 Query: 375 LWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFG 918 +W+L+++ AGGI+GDEMGLGKTVQ S+F+G L S +L+ LI++PAT++ W +EL WAP LR +L+H+S P++ G G V LTTYE+++ HAW+YV LDE QKIRNPDA+IT+ K++ T HRL +SGTPIQN+LKELWSLFDF FPGRLGTLPAFE E A I+ GG+SNASP Q Q AYRCA+VLRDLI+PYLLRR KKD++ + MP KTE VLFC+L+ RQRALY A + S E+ +++G F A+T+LRKICNH DL P+E + R G+ ++ E + V RSGKL+VL+++LP W+KQGHRVL+F Q R+MLDI+ERL+ + W + R+DGNTNV +R ++++FN+DE+ F L TTRTGG+G++LTGANR++L+DPDWNPQTD QARERAWR GQ+R VT+YRL+T GTIEEKIYQRQIFKTA+SN+VL DP+Q+RLFS +L++LFTLK D G Sbjct: 1 MWKLHQEEAGGIIGDEMGLGKTVQASSFIGVLAASRKLK-SVLIISPATMLQHWLNELAVWAPGLRRILIHQSGEDLETLPSHSF-------------CGTG------YVVLTTYENVRRNTDIYTEHAWSYVVLDEAQKIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGRLGTLPAFEQEFADTIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKKDVIEVSRMPGKTEHVLFCRLSQRQRALYEAFLLSDEVTKVVKGSKQLFAAVTMLRKICNHPDLACDPDEASFESFVR----NGYVNQGDLDEDLSDLDSDIGEEKSL--------------------VERSGKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRLVDQFNSDESYFGMLCTTRTGGVGLNLTGANRIILYDPDWNPQTDAQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRRLFSQKDLRDLFTLKADAG 499
BLAST of NO12G02740 vs. NCBI_GenBank
Match: GAX09892.1 (DNA excision repair protein ERCC-6 [Fistulifera solaris]) HSP 1 Score: 565.5 bits (1456), Expect = 3.700e-157 Identity = 292/587 (49.74%), Postives = 384/587 (65.42%), Query Frame = 0 Query: 346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRS------AAAFAAQPAYKVGRFVRKV----LEMANGGGQGRXXXXXVVC------LTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASH-FKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 G +L GG +PA IN +L+ YQR + W+WEL++Q GGI+GDEMGLGKTVQVS+FLG + S +LR L+VAPAT++ W +EL WAP +R +++H S + ++ K+ +++++V + A C +TTYE+++ H W+YV LDE QKIRNPDAEIT+ K++ T HRL +SGTPIQN+L+ELWSLFDF +PGRLGTLPAFETE PI+ GG+SNASP Q Q AYRCAL LRDLI+PYLLRR KK++ + MP KTE VLFC++T RQR +Y A I S + +L G+++ AIT+LRKICNH DLV P+E E E M RSGKL+VL+++LP W KQGHRVL+F Q + MLDI++R + +GW + R+DGNTNVGAR +++ FN+DE+ F L TTRTGG+G++LTGANR++L+DPD+NP TD QARERAWR GQ++ VTIYRL+ GTIEEKIYQRQIFKTA+SN++L DPKQ+RLFS E+ +LF+L D Sbjct: 372 GERKLQGGLYIPAWINNRLFGYQRESLEWMWELHQQQVGGIIGDEMGLGKTVQVSSFLGVMAASRKLR-SILVVAPATMLQHWLNELSTWAPGIRRIVIHSSGELDGESRTMSSAFLRKMDQWLKRVRVDRVNEAIDAEDRENMEPHCFCGTGYAVVTTYENVRRNADIYANHNWSYVVLDEAQKIRNPDAEITLACKKIRTPHRLAMSGTPIQNDLRELWSLFDFVYPGRLGTLPAFETEFGDPIKRGGYSNASPMQVQLAYRCALTLRDLINPYLLRRQKKEVKEVSRMPSKTEHVLFCRITQRQRDMYEAYIRSDNVTGLLRGRSNRLLAAITMLRKICNHPDLVCDPDESSFQAFLNNGNSNKPGRESDSEDALTDFEDVKDEETLM---------------------ERSGKLEVLSKILPLWNKQGHRVLIFCQWKMMLDIIQRFMLLKGWKFGRLDGNTNVGARQRLVDEFNSDESYFALLCTTRTGGVGLNLTGANRIILYDPDFNPSTDAQARERAWRFGQEKEVTIYRLICAGTIEEKIYQRQIFKTALSNKILQDPKQRRLFSQREIHDLFSLSAD 936
BLAST of NO12G02740 vs. NCBI_GenBank
Match: GAX14417.1 (DNA excision repair protein ERCC-6 [Fistulifera solaris]) HSP 1 Score: 562.8 bits (1449), Expect = 2.400e-156 Identity = 291/588 (49.49%), Postives = 386/588 (65.65%), Query Frame = 0 Query: 346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKV-----------------LEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASH-FKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 G +L GG +PA IN +L+ YQR + W+WEL++Q GGI+GDEMGLGKTVQVS+FLG + S +LR L+V+PAT++ W +EL WAP +R +++H S G F+RK+ E + +TTYE+++ H W+YV LDE QKIRNPDAEIT+ K++ T HRL +SGTPIQN+L+ELWSLFDF +PGRLGTLPAFETE PI+ GG+SNASP Q Q AYRCAL LRDLI+PYLLRR KK++ + MP KTE VLFC++T RQR +Y A I S + +L G+++ AIT+LRKICNH DLV P+E ++ G +++ + K VT + RSGKL+VL+++LP W KQGHRVL+F Q + ML+I++R + +GW + R+DGNTN+GAR +++ FN+DE+ F L TTRTGG+G++LTGANR++L+DPD+NP TD QARERAWR GQ++ VTIYRL+ GTIEEKIYQRQIFKTA+SN++L DPKQ+RLFS E+ +LF+L D Sbjct: 370 GEQKLQGGLYIPAWINNRLFGYQRESLEWMWELHQQQVGGIIGDEMGLGKTVQVSSFLGVMAASRKLR-SILVVSPATMLQHWLNELATWAPGIRRIVIHSSGELDGESRNISSG-FLRKLDQWLKRVRVDRVNEAIDAEDRDSMEPHSFCGTGYAIVTTYENVRRNADIYANHNWSYVVLDEAQKIRNPDAEITLACKKIRTPHRLAMSGTPIQNDLRELWSLFDFVYPGRLGTLPAFETEFGDPIKRGGYSNASPMQVQLAYRCALTLRDLINPYLLRRQKKEVKEVSRMPSKTEHVLFCRITQRQREMYEAYIRSDNVTGLLRGRSNRLLAAITMLRKICNHPDLVCDPDES-----FQVFLNNGNSNKPGRESDSEDALSDFDD---------VKDVKDEVTLME-----RSGKLEVLSKILPLWNKQGHRVLIFCQWKMMLNIIQRFMLLKGWKFGRLDGNTNIGARQRLVDEFNSDESYFALLCTTRTGGVGLNLTGANRIILYDPDFNPSTDAQARERAWRFGQEKEVTIYRLICAGTIEEKIYQRQIFKTALSNKILQDPKQRRLFSQREIHDLFSLSAD 936
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PRW57121.1 (CHROMATIN REMODELING 8 [Chlorella sorokiniana]) HSP 1 Score: 561.6 bits (1446), Expect = 5.300e-156 Identity = 286/565 (50.62%), Postives = 377/565 (66.73%), Query Frame = 0 Query: 352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917 GG++LPA + +L+ YQRT V+W+WEL+ Q AGGI+GDEMGLGKT+QV +FL GL SG R LIV PAT++ QW EL AW P RV LLH SA + +A A + RF R + E+A + LTTYE+++L R EL+G W YV LDEG KIRNPDAE+T+ AKQ+ TVHR+++SG+PIQN L ELWSLFDF FPG+LGTLP F + A PI++GG++NA+P Q AY+CA++LRDLI PYLLRR K D+ +P+KTEQVLFC LT QR LY+ +SS E++ I G + I +LRKICNH DL+ E A DYG+ RSGK+QVLA+VL W +QGH+ L+F+QT+QMLDI+E+ + QG+ Y RMDG+T+V R +I+ FN + +F FLLTTR GGLG++LTGANRV+L+DPDWNP TD+QARERAWR+GQ R V IYRL+T+GTIEEK+Y RQ++K ++++VL DP+Q+R F + +L +LFTL +++ Sbjct: 514 GGYRLPADVWNRLFDYQRTAVKWMWELHTQRAGGIIGDEMGLGKTIQVISFLAGLHHSGLFR-PSLIVCPATVLRQWLRELRAWWPLFRVALLHDSARSGSAAGA-RPSRF-RLIQEIARS--------DCGILLTTYETMRLQRAELVGVDWGYVVLDEGHKIRNPDAEVTLAAKQMQTVHRIVMSGSPIQNRLTELWSLFDFVFPGKLGTLPVFTAQFALPIQIGGYANANPLQVSTAYKCAVILRDLIAPYLLRRRKVDVRA--QLPQKTEQVLFCTLTGEQRTLYKGYLSSKELQEIFAGSRTALAGIDILRKICNHPDLLERAKWE--------------------------------------------------AAQDYGNPERSGKMQVLAKVLRHWREQGHKALVFTQTQQMLDIVEKHAQAQGYTYHRMDGSTSVATRARLIDDFNNNPEVFCFLLTTRVGGLGVNLTGANRVLLYDPDWNPSTDVQARERAWRIGQTREVVIYRLITSGTIEEKVYHRQVYKHFLTDKVLRDPRQRRFFKAKDLTDLFTLGDEY 1015
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PSC71103.1 (CHROMATIN REMODELING 8 [Micractinium conductrix]) HSP 1 Score: 561.6 bits (1446), Expect = 5.300e-156 Identity = 285/568 (50.18%), Postives = 376/568 (66.20%), Query Frame = 0 Query: 352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLH---RSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917 GGF+LP+ + +L+ YQRT V+W+WEL+ Q AGGI+GDEMGLGKT+Q+ AFL GL SG R LIV PAT++ QW EL AW P RV LLH RS A A +P+ R ++++ + +G + LTTYE+++L R ELL W YV LDEG KIRNPDAE+T+ AKQ+ TVHR+I+SG+PIQN L ELWSLFDF FPG+LGTLP F + A PI++GG++NASP Q AY+CA++LRDLI PYLLRR K D+ T +P KTEQVLFC LT QR+LYR ++S E++ I G + I +LRK+CNH DL+ E + DYG+ RSGK+QVLA VL W GH+ L+F+QT+QMLDILE+ QG+ Y RMDG+T+V R +++ FNT+ ++F FLLTTR GGLG++LTGANRV+L+DPDWNP TD+QARERAWR+GQ R V IYRL+T+GTIEEK+Y RQ++K ++++VL DP+Q+R F + +L +LFTL +++ Sbjct: 485 GGFRLPSDVWERLFDYQRTAVKWMWELHTQRAGGIIGDEMGLGKTIQIIAFLAGLHHSGLFR-PTLIVCPATVLRQWLRELRAWWPLFRVALLHDSARSGAGAARRPSRT--RIIKEIGQSGSG-----------ILLTTYETMRLQRGELLDVEWGYVVLDEGHKIRNPDAEVTLVAKQVQTVHRIIMSGSPIQNRLTELWSLFDFVFPGKLGTLPIFTAQFALPIQIGGYANASPLQVSTAYKCAVILRDLIAPYLLRRRKADVRT--QLPAKTEQVLFCTLTPEQRSLYRGYLASKELQEIFAGNRAALAGIDILRKVCNHPDLLERAKWEATE--------------------------------------------------DYGNAERSGKMQVLARVLQHWHAAGHKALVFTQTQQMLDILEKHTAAQGYTYHRMDGSTSVAQRARLMDDFNTNPDVFCFLLTTRVGGLGVNLTGANRVLLYDPDWNPSTDVQARERAWRIGQTREVVIYRLITSGTIEEKVYHRQVYKHFLTDKVLRDPRQRRFFKAKDLTDLFTLGDEY 986
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PRP77131.1 (hypothetical protein PROFUN_14545 [Planoprotostelium fungivorum]) HSP 1 Score: 555.4 bits (1430), Expect = 3.800e-154 Identity = 288/595 (48.40%), Postives = 384/595 (64.54%), Query Frame = 0 Query: 322 EPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917 E I S + A ++ +MEG+ ++LP +++ L+ YQRTGVRW+WEL+ Q AGGI+GDEMGLGKT+Q FL GL S L G +IV+PATLM QW +E++ W P RVVLLH S++ K R +KV++ G G V +TTYE ++L + LL W Y+ LDEG +IRNPDA+ T+ K+ PT HRL+LSG+PIQNNL ELWS+FDF FPG+LGTLP F+ E PI LGG+ NASP Q AY+CA++LR+LI PYLLRR+K +++ +PKK EQVL C LT QR +Y + S E+ IL+GK + I +LRKICNH DL+ + E + DYG+V RSGKL+V+ ++LP W +GH+VLLF+QT+QM+DILE + +G YLRMDG+T + +R ++E +NTD +I++FLL+T+ GGLG++L GANRV++FDPDWNP D+QARERAWR+GQKR VTIYRL+T+GTIEEKIY RQIFK +++R+L DPKQKRLF LK+LFTL E++ Sbjct: 429 ETIVSSTSFSADREKDTVMEGD----------YRLPYQMSEALFEYQRTGVRWMWELHTQAAGGIIGDEMGLGKTIQTICFLAGLHYSKLLDGPIIIVSPATLMQQWVNEIHKWWPPFRVVLLHDSSSV-------KGNR--KKVMKTVTGRKGG-------VLITTYEGVRLNQDLLLSEYWDYIVLDEGHRIRNPDADTTLAMKRFPTPHRLVLSGSPIQNNLTELWSVFDFVFPGKLGTLPTFQQEFVYPISLGGYVNASPIQLTTAYKCAVLLRELIKPYLLRRLKSNVLQ--QLPKKNEQVLLCHLTREQRDVYEKFLKSDEVVSILDGKRNALYGIDILRKICNHPDLLERKSNERPE--------------------------------------------------DYGNVDRSGKLKVMEQLLPLWRDEGHKVLLFAQTKQMMDILETFLVMKGMSYLRMDGDTPIKSRAYIVESYNTDTSIYVFLLSTKVGGLGLNLVGANRVIIFDPDWNPSNDMQARERAWRIGQKRDVTIYRLITSGTIEEKIYHRQIFKQFLTDRILKDPKQKRLFKYKHLKDLFTLGEEY 945 The following BLAST results are available for this feature:
BLAST of NO12G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02740 ID=NO12G02740|Name=NO12G02740|organism=Nannochloropsis oceanica|type=gene|length=3410bpback to top protein sequence of NO12G02740.1 >NO12G02740.1-protein ID=NO12G02740.1-protein|Name=NO12G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1088bpback to top Synonyms
Publications
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