NO12G01940, NO12G01940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_005856119.1 (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526] >EKU20255.1 rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 880.6 bits (2274), Expect = 3.700e-252 Identity = 472/787 (59.97%), Postives = 554/787 (70.39%), Query Frame = 0 Query: 3 WRRHRQAFFSLSILFLQLDSTQALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSGPG--ANDCGTGF--TTMMLAATAATPXXXXXXXXXXXXXXXXXXXXXSRKEAMMTV-TSFTMLMMGAVLGAGAWQRPKQTAAV--AVAGTPLHSFSIRNSYDSYAANYDDLDGGSAARWLGLEAARQELIGRAHGRVLECGVGTGLNFPFYKF-QKDGNLVALDAIDLSPGMLREARAKAALLGLGEERVRFHEMDVANLVFADGSFDYVCDTFSLCVYPDPLKALKEMTRVCKPGVGRVLLLENSRSDLQILAAYQDATAHVVARIGGKSCVYNQDVPKLAQAAGLQVVRREKIAGGLFTMLECTR 782 WR + SL L L D QA S PPLK YFAPCSGGL+ +LGQELL QIG +++VQKRGCAFL TEEAAYRALLWSRTANG+WQLMVRQRG+ +R DLY M RR+ W EAMSV+DS+AV CV+GGGE++ DI HTH+SSLT+KNA+VD+FRER+GG+RP+VDA+DPVLPLVLFLQ DEAWLYRSLSG SLHKRGYRQQMHKSSLRETTAAA+L+LAGY+P H+L+DPMCGSGT+AIEAAL+AR++APGL RLKRE DL+VLTP+RWPDTD ALLR++V EA +EL +APLPI NDWHPAA+ELAKRDAG+AGVFHD+ FS++D D +L +V+CNPPWDLRLN GA ESWE LGRFLKREAG +AFLLSGNPDVTR L MK KIPIDQAGMSLRLL Y VLP + +GP A+D T T+ L+ T P SR +A+ +S T L +G +LG P V + + S S++ +YD YA++YD LDGG AAR+LGL+AAR+ELIGRA G VLECGVGTGLN PFY+F V+LDAIDLSPGMLREAR+KAA L LG + VRF EMDVA + FAD SFD VCDTFSLCVY DP +ALKEM RVCK GRVLLLENSRS+L +AAYQD TA +VAR GGK CVYNQDV LA+ AGL+V+ ++ + GGL TMLEC R Sbjct: 28 WRPIKALLASLLPLAL-FDRAQAFS---GHPPLKHYFAPCSGGLATVLGQELLSTQIGAAEVEVQKRGCAFLGTEEAAYRALLWSRTANGVWQLMVRQRGICNRKDLYDMVRRIAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGLTRLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASD--HRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQVLP---------------------------PRLAGGESEGRAASLRGGPASQATGPSERADDTQTPLRATSTRLSVTPPPP--------QRLARPGIAPVRASRAQALSGAGSSLTTLAVGLLLGCQRSSSPALARNVFDVPSSSVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKELIGRARGHVLECGVGTGLNLPFYEFGSGSAPTVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFREMDVAKMDFADESFDCVCDTFSLCVYLDPAQALKEMARVCKAESGRVLLLENSRSNLLPVAAYQDVTAGIVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLMTMLECAR 773
BLAST of NO12G01940 vs. NCBI_GenBank
Match: EWM25792.1 (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 879.8 bits (2272), Expect = 6.300e-252 Identity = 472/787 (59.97%), Postives = 551/787 (70.01%), Query Frame = 0 Query: 3 WRRHRQAFFSLSILFLQLDSTQALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSGPGANDCG----TGFTTMMLAATAATPXXXXXXXXXXXXXXXXXXXXXSRKEAMMTV-TSFTMLMMGAVLGAGAWQRPKQTAAV--AVAGTPLHSFSIRNSYDSYAANYDDLDGGSAARWLGLEAARQELIGRAHGRVLECGVGTGLNFPFYKF-QKDGNLVALDAIDLSPGMLREARAKAALLGLGEERVRFHEMDVANLVFADGSFDYVCDTFSLCVYPDPLKALKEMTRVCKPGVGRVLLLENSRSDLQILAAYQDATAHVVARIGGKSCVYNQDVPKLAQAAGLQVVRREKIAGGLFTMLECTR 782 WR + SL L L D QA S PPLK YFAPCSGGL+ +LGQELL QIG +++VQKRGCAFL TEEAAYRALLWSRTANG+WQLMVRQRG+ +R DLY M RRV W EAMSV+DS+AV CV+GGGE++ DI HTH+SSLT+KNA+VD+FRER+GG+RP+VDA+DPVLPLVLFLQ DEAWLYRSLSG SLHKRGYRQQMHKSSLRETTAAA+L+LAGY+P H+L+DPMCGSGT+AIEAAL+AR++APGL RLKRE DL+VLTP+RWPDTD ALLR++V EA +EL +APLPI NDWHPAA+ELAKRDAG+AGVFHD+ FS++D D +L +V+CNPPWDLRLN GA ESWE LGRFLKREAG +AFLLSGNPDVTR L MK KIPIDQAGMSLRLL Y VLP + GP + G T L AT +T SR +A+ +S T L +G +LG P V + + S S++ +YD YA++YD LDGG AAR+LGL+AAR+ELIGRA G VLECGVGTGLN PFY+F V+LDAIDLSPGMLREAR+KAA L LG + VRF EMDVA + FAD SFD VCDTFSLCVY DP +ALKEM RVCK GRVLLLENSRS+L +AAYQD TA +VAR GGK CVYNQDV LA+ AGL+V+ ++ + GGL TMLEC R Sbjct: 28 WRPIKALLASLLPLAL-FDRAQAFS---GHPPLKHYFAPCSGGLATVLGQELLSTQIGAAEVEVQKRGCAFLGTEEAAYRALLWSRTANGVWQLMVRQRGICNRKDLYDMVRRVAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGLTRLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASD--HRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQVLPPRLAGGESEGRAASL----------------------------------RGGPASQATGPSERVDDTQTPLRAT-STRLSVTPPPPQRLARPGIAPVRASRAQALSGAGSSLTTLAVGLLLGCQRSSSPALARNVFDVPSSSVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKELIGRARGHVLECGVGTGLNLPFYEFGSGSAPTVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFREMDVAKMDFADESFDCVCDTFSLCVYLDPAQALKEMARVCKAESGRVLLLENSRSNLLPVAAYQDVTAGIVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLMTMLECAR 773
BLAST of NO12G01940 vs. NCBI_GenBank
Match: CBJ31304.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 304.3 bits (778), Expect = 1.100e-78 Identity = 170/412 (41.26%), Postives = 236/412 (57.28%), Query Frame = 0 Query: 30 PRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRG------VQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKR-----ERDLSVLTP--SRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429 P P + YFA C GL +L EL+ +G + RGC F + Y+A+LW RTA+ + +L V + G + + LYG A V W M +L V ++ G + +TH+H+++LT+KNAVVD R+ GKRP+VD E+ LPLV++L A LYRSLSGT S+HKRGYR MH +SL+E AA LLL +G++P L DPMCGSGT+ IEAALIA + APGL+ + ++ P + WPD D L R+ V EA++ + + P I NDWH A+ LA RDA AGV +T +EDV + + + + NPPWD RL+ GA +SW L FL+RE + DA++LSGNP ++R L MK + + G+ LR L YH+ Sbjct: 261 PLAPGERSYFATCPRGLETVLRDELMSPLVGATLVKSSGRGCHFRGDQAVGYKAILWLRTAHRVLEL-VGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAIL--GVVPDGLTHSHFTALTVKNAVVDQLRD--DGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQALADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGGRAKVAGWKPAVTAWPDFDPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVG------RWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMFLSTGGVELRWLKYHL 661
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_005776733.1 (hypothetical protein EMIHUDRAFT_74188, partial [Emiliania huxleyi CCMP1516] >EOD24304.1 hypothetical protein EMIHUDRAFT_74188, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 268.1 bits (684), Expect = 8.700e-68 Identity = 168/410 (40.98%), Postives = 227/410 (55.37%), Query Frame = 0 Query: 25 ALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYR--QQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSN---EDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNG-GAAESWEKLGRFLKREAGDG--DAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHY 427 ALS APR YFA GGL +L EL +IG + + G F E RA+LWSRTA + +L+ R+ V ++ LY AR V W E ++ + GGGE +THTH+S+LT+KNA D RE G RP+VD +P +PL L + EA LYR LSG SLH+RGYR + +HK++++E+ AAA+LL AGY+ L DPMCGSGT+ +EAALIA + APGLLR L R + AP PI AN+ HP A+ LA+R A AGV + FS+ + + H +V+ NPPW RL+ GAA+SW LG +LKRE +G A LLSG+ ++TR L ++ + + P++QAG SLR+L Y Sbjct: 11 ALSAAPRP---STYFATTLGGLEPVLAAELSSPEIGASAVSCGRLGVHFEGGPEVGARAVLWSRTALRVMELLERREAVHTQASLYDFARAVRWSEVVASEQQTLSVGAGGGGE---PLTHTHFSALTVKNAACDALREERGW-RPSVDRAEPDVPLHLHVHRGEARLYRVLSGAGSLHRRGYRSGEAVHKAAMKESLAAAMLLHAGYDGTSP-LCDPMCGSGTLLVEAALIATRTAPGLLRAS-PPPLVKWGGGRHAAAWEXXXXXXXXXXXXXRRDAAPAPIMANEVHPGALALARRSAAAAGVEALIDFSHGCCSEYVPPH---------APSLVVSNPPWGGRLDADGAADSWAVLGEWLKREGREGRAAAHLLSGSRELTRHLRLRASSRTPVEQAGDSLRILRY 402
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_009035430.1 (hypothetical protein AURANDRAFT_12176, partial [Aureococcus anophagefferens] >EGB09350.1 hypothetical protein AURANDRAFT_12176, partial [Aureococcus anophagefferens]) HSP 1 Score: 259.2 bits (661), Expect = 4.000e-65 Identity = 163/404 (40.35%), Postives = 221/404 (54.70%), Query Frame = 0 Query: 37 QYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTG-GKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQM-HKSSLRETTAAALLLLAGY---EPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRL-------KRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429 +YFA C GL +L EL G +I ++ V K GC F RA L +RTA + +L+ + GV++ DLY +AR V W M VD +L V +G S +TH+H+SSLT+KNA+VD+FR G RP+VD + +P+ L++ DEA LYR+++ + SLHKRGYR + HK++LR T AA LL LA + +L DPMCGSGT+ +EAAL+AR +APGL+R E L + W D D + P I A+D H A+ LAK A A V D+ F+ D L L T +V+ NPPWD RL+ GA E+W+ LG FL+REA A L+GN VTR L M+ + K + G+ LR L Y V Sbjct: 2 RYFASCCRGLEEVLASELSGPRIRSPEVRVGKSGCEFDGDMGVLLRAGLEARTATKVMELLACEAGVETAQDLYDVARNVPWDALMRVDGTLRVDTTLGRAP-SAALTHSHFSSLTVKNAIVDSFRAGNRLGSRPSVDTKACDVPVHLYVDYDEARLYRAVA-SESLHKRGYRGDVAHKAALRTTVAAGLLYLADWPAKAAAGAVLCDPMCGSGTLPVEAALMARDVAPGLIRAGFGPAGPPSEAPLR-FACTTWLDFDGDAWDAALGXXXXXXXXXXPAQILASDAHDGALRLAKDGARRASVDRDVVFARGDAATLAL------GATPDVVVSNPPWDGRLD-GAEEAWDALGSFLRREAPGATAHALTGNMAVTRNLRMRASSKRKLVSGGVDLRFLKYEV 395
BLAST of NO12G01940 vs. NCBI_GenBank
Match: KOO31605.1 (rrna (guanine-n -)-methyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 248.1 bits (632), Expect = 9.300e-62 Identity = 141/296 (47.64%), Postives = 184/296 (62.16%), Query Frame = 0 Query: 136 GGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYR--QQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVL 430 GG + H+H+++LT+KNAV D RER G RP+VD ED LPL L++ N EA LYR LSG +S+HKRGYR Q +H ++LRET AAA+LL A Y P +L DPMCGSGTI IEAALIA APGLL R LT RWPDT + R + EA + P+AP I AND + LA+R A AGV ++FS D + ++V+ NPPWD+RL GG E+W LG+FL+RE G A++LSGN ++T+ L M+ + ++ I+ AG SL L+ Y VL Sbjct: 100 GGSGESGLAHSHFTALTVKNAVCDALRERHGW-RPSVDPEDADLPLFLYVHNGEASLYRVLSGGASMHKRGYRAGQAVHAAALRETLAAAMLLHAEYAPSAQVLCDPMCGSGTIPIEAALIATDTAPGLL-----RPPPALT--RWPDTSPSTWRSLTAEAREARRPRAPCAILANDLIRGNLALAERAASAAGVATSISFSAADA------AAYQPPDAPQLVLTNPPWDIRLEGG-EEAWRSLGQFLRRECGGARAWVLSGNKELTQHLHMRASSRLRIENAGSSLALISYDVL 380
BLAST of NO12G01940 vs. NCBI_GenBank
Match: PIE24430.1 (hypothetical protein CSA62_03910 [Planctomycetes bacterium]) HSP 1 Score: 234.2 bits (596), Expect = 1.400e-57 Identity = 148/392 (37.76%), Postives = 209/392 (53.32%), Query Frame = 0 Query: 37 QYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGA--AESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHY 427 +Y+APCS GL L EL R +G E++ G F YRA+LW R+A + +++ R +RD Y A ++W + M VD + ++ G ITH+ +++L +K+A+ D FR ++ G+RPNVD LPL L ++ DEA + R L+G SLHKRGYR K+ L E AA LLLL+G++ +L DPMCGSGT IEAAL+A APG R RW D D++L R++ EA P + D H AIE+AK A AGV + F + V L K QA IV+CNPP+ R+ G+ +SW LG FL A DA++LSG+ +T+ L ++ +IP+ A + R L Y Sbjct: 4 EYYAPCSLGLEPALAHEL--RSLGAERVHSIPGGAEFFGDRALGYRAVLWLRSAIRVQEILHR-IDASTRDRFYKGALAIDWSQYMDVDQTFQIE----GKVRDSKITHSKFAALVLKDAIADRFR-KSHGRRPNVDKNRADLPLRLLIREDEAVISRDLAG-MSLHKRGYRPLQVKAPLGEAIAAGLLLLSGWDRSSPLL-DPMCGSGTFVIEAALLASGRAPGAQRR--------FALERWIDLDESLWRELRQEAEGSGAQSLPFDLLGADRHAGAIEIAKSSARAAGVAKLVRFEHSPVSSLRPK-QAPG-----IVVCNPPYGERIGRGSDLTQSWRDLGSFLHDHADGADAWILSGDKFLTKALGLRARRRIPVQNANIDCRWLAY 371
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_024397385.1 (uncharacterized protein LOC112292794 isoform X2 [Physcomitrella patens] >PNR39322.1 hypothetical protein PHYPA_019600 [Physcomitrella patens]) HSP 1 Score: 225.7 bits (574), Expect = 5.000e-55 Identity = 155/466 (33.26%), Postives = 220/466 (47.21%), Query Frame = 0 Query: 35 LKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVR---QRGVQSRDDLYGMAR-RVEWPEAMSVDDSLAVQCVIG-------------GGEISQ----------------------------DITHTHYSSLTIKNAVVDNFRERTGGKRPNV---DAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPI--------------DHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIK-KELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRL-------NGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLP 431 L +YFA C+ GL +L EL IG ++++V K G +F+ + Y+A LW RTA + + G D +Y R ++WP + D S Q G E+S DI ++ ++S+ K+A+ D RE GG RP +PL LFL DEA LYR +SG SLHKRGYR MH++SL E AAA+L +AG+ + +L+DPMCGSGT IEAAL+A +APGL+R + +W D D+ ++ A+ ++ + + + ND H A+ L RDA TAGV H L S +D+ + + +V+ NPPW RL N E+W+ LGRFLK + D + LSGN +VTR + M+ K P+ G +LLHYHVLP Sbjct: 106 LTKYFATCAPGLETVLAAELSSPLIGAQEVEVGKAGVSFVGLKVTGYKASLWLRTAVRVLVQLAAGPLPEGRGRNDPVYTFIRDAIDWPSILLDDSSSHTQQPDSNERYRPRSNSGGRGDEMSNSRAGTATHSAQAPRFRNFGVQSRVWSCTDIHNSAFASVRAKDAICDAMREACGGHRPEPPEHGGSTADVPLFLFLFRDEAVLYRDMSGV-SLHKRGYRDVMHRASLNEGIAAAVLTIAGWNRAVPGFGDANVNAPGEERVLLDPMCGSGTFLIEAALMASNVAPGLMRRQ-------WPFQKWHDFDENAWKQCKDNAVSMQQSSLSGVRLLGNDIHAGALSLCHRDASTAGVRHLLELSCKDIQEY------KPLVVPSLVVTNPPWGERLIDSRNEENEWVYETWQGLGRFLKSQCSCADVYALSGNAEVTRAMHMRADKKWPLVIGGQERKLLHYHVLP 557
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_024397384.1 (uncharacterized protein LOC112292794 isoform X1 [Physcomitrella patens]) HSP 1 Score: 224.6 bits (571), Expect = 1.100e-54 Identity = 155/469 (33.05%), Postives = 220/469 (46.91%), Query Frame = 0 Query: 35 LKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVR---QRGVQSRDDLYGMAR-RVEWPEAMSVDDSLAVQCVIG-------------GGEISQ----------------------------DITHTHYSSLTIKNAVVDNFRERTGGKRPNV---DAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPI--------------DHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIK-KELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRL----------NGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLP 431 L +YFA C+ GL +L EL IG ++++V K G +F+ + Y+A LW RTA + + G D +Y R ++WP + D S Q G E+S DI ++ ++S+ K+A+ D RE GG RP +PL LFL DEA LYR +SG SLHKRGYR MH++SL E AAA+L +AG+ + +L+DPMCGSGT IEAAL+A +APGL+R + +W D D+ ++ A+ ++ + + + ND H A+ L RDA TAGV H L S +D+ + + +V+ NPPW RL N E+W+ LGRFLK + D + LSGN +VTR + M+ K P+ G +LLHYHVLP Sbjct: 106 LTKYFATCAPGLETVLAAELSSPLIGAQEVEVGKAGVSFVGLKVTGYKASLWLRTAVRVLVQLAAGPLPEGRGRNDPVYTFIRDAIDWPSILLDDSSSHTQQPDSNERYRPRSNSGGRGDEMSNSRAGTATHSAQAPRFRNFGVQSRVWSCTDIHNSAFASVRAKDAICDAMREACGGHRPEPPEHGGSTADVPLFLFLFRDEAVLYRDMSGV-SLHKRGYRDVMHRASLNEGIAAAVLTIAGWNRAVPGFGDANVNAPGEERVLLDPMCGSGTFLIEAALMASNVAPGLMRRQ-------WPFQKWHDFDENAWKQCKDNAVSMQQSSLSGVRLLGNDIHAGALSLCHRDASTAGVRHLLELSCKDIQEY------KPLVVPSLVVTNPPWGERLIDSRFCRNEENEWVYETWQGLGRFLKSQCSCADVYALSGNAEVTRAMHMRADKKWPLVIGGQERKLLHYHVLP 560
BLAST of NO12G01940 vs. NCBI_GenBank
Match: CEL92165.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 218.4 bits (555), Expect = 7.900e-53 Identity = 149/495 (30.10%), Postives = 239/495 (48.28%), Query Frame = 0 Query: 35 LKQYFAPCSGGLSNILGQEL--LGRQI--GVEKID-------VQKRGCAFLATEE--AAYRALLW----SRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPID-HILVDPMCGSGTIAIEAALIARQIAPGLLRLK----------------------RERDLSVLT-----------PS-----------------------------------------RWPDTDQALLRKVVLEAIKKEL------PQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSG---NPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429 ++++F PC+ GL I+ E+ + Q+ G + +D KRG +++ AA + W RT + + + ++ RDDL+ ++W MSV D+L+VQ + G ++ D+ HTH+++LT+K+A+V F R RP+VD DP LPL ++L LYR+ SG SLHKRGYR++M K++LRET AA +L ++ ++P +L+DPMCGSGTI IEAAL+A + PG++RL+ R +S+LT PS RWPD D+ + R V+ + ++ E +AP+ I+ +D AI +A+ A AGV + S+ D+ L L + + +++ NPPWD+RLN A +WE + F+ AG G A+LL G ++ + M+ K I Q G+ + L + + Sbjct: 1 MREFFVPCAAGLETIVEMEMRRITEQLAGGRDALDGGSVVTKQSKRGVTLWVSKDIPAAVQLPYWLTVCLRTGQRVLERIDGPVELRERDDLWSWVNAIDWRPYMSVQDTLSVQVTL-GNDVPSDLRHTHFTALTVKDAIVKQFLTRDKSARPSVDFVDPDLPLFVYLHQGRGTLYRAWSGAGSLHKRGYRKKMPKAALRETMAAGMLYVSQWDPQSRQVLLDPMCGSGTIPIEAALMATRRMPGVVRLETFLADMNVEPYRTKGTRVAPDAESRAVSLLTHLHRTYDAPPRPSLGEDCRHDNYGDDLDGGLYDSDGDSVINGMMSPVVRPFPFCRWPDFDEPVWRSVLRKCVEGERDIAAEGAEAPVIIYGSDRQEGAIAMARDAARRAGVSEHVQLSHNDIAHLQLPHRHKPD----VIVSNPPWDIRLNSDAGAAWEAMRAFVCERAGGGRAWLLCGGDARDELFGAMRMRAAKKRRIVQGGVEMSLRAFDI 490 The following BLAST results are available for this feature:
BLAST of NO12G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01940 ID=NO12G01940|Name=NO12G01940|organism=Nannochloropsis oceanica|type=gene|length=2584bpback to top protein sequence of NO12G01940.1 >NO12G01940.1-protein ID=NO12G01940.1-protein|Name=NO12G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=784bpback to top Synonyms
Publications
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