NO12G01690, NO12G01690 (gene) Nannochloropsis oceanica

Overview
NameNO12G01690
Unique NameNO12G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1716
Alignment locationchr12:504990..506705 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine mitochondrial carrier protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:504990..506705 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: EWM25873.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana])

HSP 1 Score: 436.4 bits (1121), Expect = 6.900e-119
Identity = 216/260 (83.08%), Postives = 237/260 (91.15%), Query Frame = 0 
Query:   28 AGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLSPVFP 288
            AGGAAGTAVD+SLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGA+LFFSIYE++K +AEP V+   APLVHM AAS GETGACL+RVPTENVKQNLQAGRY T  EA+R I  +EG+MGFY+GFLSTVFRE+PFSF+QFP+YEAAKA W+ EQG P+SP QAAACGS AGA+AAA+TTPLDVIKTRLILEKD+ GRKY GIVDVFRRVV EEG  TLF+G+APRVMWITIGGFVYFGAYEEVRRLLSPVFP
Sbjct:   19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLSPVFP 278
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: XP_005856104.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >EKU20240.1 s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 364.8 bits (935), Expect = 2.500e-97
Identity = 185/245 (75.51%), Postives = 206/245 (84.08%), Query Frame = 0 
Query:   38 VSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGF-----YRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEE 278
            +SLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGA+LFFSIYE++K +AEP V+   APLVHM AAS GETGACL+RVPTENVKQNLQAGRY T  EA+R I  +E L        +RG       ++PFSF+QFP+YEAAKA W+ EQG P+SP QAAACGS AGA+AAA+TTPLDVIKTRLILEKD+ GRKY GIVDVFRRVV EEG  TLF+G+APRVMWITIGGFVYFGAYEE
Sbjct:    1 MSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEDLAQIQVFTNFRGNFCLCIPQIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE 245
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: CBN75663.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 330.5 bits (846), Expect = 5.300e-87
Identity = 166/267 (62.17%), Postives = 200/267 (74.91%), Query Frame = 0 
Query:   16 ISQQYSFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLL 283
            +S+Q SF+++LLAGG AGTAVDV+L+PLDTIKTRLQ+ EGF K+GG RGVY GL AAA GSAPGA+LFFS YE+ K   +P      +PL HMAAAS  ET ACLVRVPTENVKQ +QAG + T  E M  I+   G+MGFY G+L+TV RE+PFSFIQFPIYE  KAAW+  +G P+ P++AA CGS +GA AAA+TTP+DV+KTRL+L  D HG  Y G+ D FRRV  EEG   L SG+ PRV WI IGGFV+FG YE  +  L
Sbjct:    1 MSEQPSFVASLLAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP-----DSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWL 262
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: OQR95780.1 (S-adenosylmethionine mitochondrial carrier protein [Thraustotheca clavata])

HSP 1 Score: 326.2 bits (835), Expect = 1.000e-85
Identity = 163/270 (60.37%), Postives = 207/270 (76.67%), Query Frame = 0 
Query:   17 SQQYSFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLK---QKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLS 284
            S   SF ++L+AGG AGT+VDV+LFPLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGA+LFFS YE+ K   Q   P+++   +PL+HM+AA+ GET ACLVRVPTE VKQN+Q G  +    +++ + A  G+ GFYRG+ S + RE+PFSFIQFP++E  KA WS ++G  +SPFQ A CGS +G IAA++TTPLDV+KTRL+L KD HG +Y G+ D F RV  +EG +TLFSG+ PR MWI+IGGFV+FGAYE     LS
Sbjct:    5 SSSKSFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSN--SPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFLS 272
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: XP_009822865.1 (hypothetical protein H257_01389, partial [Aphanomyces astaci] >ETV88002.1 hypothetical protein H257_01389, partial [Aphanomyces astaci])

HSP 1 Score: 322.4 bits (825), Expect = 1.400e-84
Identity = 161/266 (60.53%), Postives = 202/266 (75.94%), Query Frame = 0 
Query:   21 SFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLK---QKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLS 284
            SF+ +L+AGG AGT VDV+L+PLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGA+LFFS YE+ K   QK +P++A   +P++HMA+A+ GET  CLVRVPTE VKQNLQ G + +  E++R I    G+ GFYRG+ S + RE+PFSFIQFP++E  K+ WS  QG  +SP Q A CG+ +G  AA++TTPLDVIKTRL+L KD  G +Y G+ D F RV  +EG +TLFSG+ PR MWITIGGFV+FG YE     LS
Sbjct:   13 SFLISLIAGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSSYETTKAFLQKQQPHLAD--SPVIHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTNGIAGFYRGYWSLLAREIPFSFIQFPLWEGMKSTWSQRQGEAVSPVQGAVCGALSGGFAASITTPLDVIKTRLMLGKDAQGVEYIGMRDAFTRVYTQEGWQTLFSGVKPRTMWITIGGFVFFGVYEHASATLS 276
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: XP_008870135.1 (hypothetical protein H310_06745 [Aphanomyces invadans] >ETW01137.1 hypothetical protein H310_06745 [Aphanomyces invadans])

HSP 1 Score: 320.9 bits (821), Expect = 4.200e-84
Identity = 161/265 (60.75%), Postives = 201/265 (75.85%), Query Frame = 0 
Query:   21 SFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLK---QKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLL 283
            SF+++L+AGG AGT VDV+L+PLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGA+LFFS YE+ K   Q+ +P++A   +P+VHMA+A+ GET  CLVRVPTE VKQNLQ G + +  E++R I    G+ GFYRG+ S + RE+PFSFIQFP++E  K AW H QG  +SP Q A CGS +G  AA +TTPLDVIKTRL+L KD  G +Y G+ D F RV  +EG +TLFSG+ PR  WITIGGFV+FG YE+    L
Sbjct:   11 SFLTSLIAGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLAD--SPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: OWZ21214.1 (Mitochondrial substrate carrier [Phytophthora megakarya])

HSP 1 Score: 301.6 bits (771), Expect = 2.600e-78
Identity = 152/259 (58.69%), Postives = 190/259 (73.36%), Query Frame = 0 
Query:   22 FMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQ---KAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEE 278
            F   LL G  AGT+VD++LFPLDTIKTRLQ++ GF+KAGGFRG+Y GL AAAAGSAPG +LFFS YE+ K     A P   ++++PLVHMAAA+ GE  ACLVR PTE VKQ +Q G Y +  EA+  I A +G+ GFYRG+ S + RE+PFSFIQFP++E  K  WS +Q  P+S FQ A CGS AG +AA++TTPLDV+KTRL+L KD  G  Y G ++   RV  +EG K LFSG+ PR MWI+IGGFV+FG YE+
Sbjct:   14 FFPALLGGAVAGTSVDIALFPLDTIKTRLQSAHGFFKAGGFRGIYSGLSAAAAGSAPGGALFFSTYETSKSLIGMAAP--NQKHSPLVHMAAAASGEMAACLVRTPTEIVKQRMQTGVYKSLPEALNAIRAADGVAGFYRGYWSMIAREIPFSFIQFPLWEGLKYQWSKKQDAPVSSFQGAICGSIAGGVAASITTPLDVVKTRLMLGKDAKGVPYKGTLNTLSRVYTDEGLKRLFSGVGPRTMWISIGGFVFFGMYEK 270
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: OQR97073.1 (S-adenosylmethionine mitochondrial carrier protein [Achlya hypogyna])

HSP 1 Score: 295.0 bits (754), Expect = 2.500e-76
Identity = 154/266 (57.89%), Postives = 192/266 (72.18%), Query Frame = 0 
Query:   21 SFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAE---PYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLS 284
            SF ++L+AGG AGT+VDV+LFPLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGA+LFFS YE  K+  +   P++A   +PL+HM AA+ GET ACLVRVPTE VKQN+Q G       +++ + A  GL GFYRG+ S + RE+PFSFIQFP++E  KA+WS +QG  +S  Q              +TTPLDV+KTRL+L KD  G +Y G+ D F RV  EEG + LFSG+ PR MWI+IGGFV+FGAYE V   LS
Sbjct:   10 SFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYEMSKEALQTQLPHMAS--SPLIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSVKTLYATNGLSGFYRGYWSMLAREIPFSFIQFPLWEGLKASWSAKQGEQVSALQGXXXXXXXXXXXXXITTPLDVVKTRLMLGKDAQGVEYRGMKDTFVRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETVSATLS 273
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: XP_002999259.1 (S-adenosylmethionine mitochondrial carrier protein, putative [Phytophthora infestans T30-4] >EEY69405.1 S-adenosylmethionine mitochondrial carrier protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 292.7 bits (748), Expect = 1.200e-75
Identity = 149/266 (56.02%), Postives = 188/266 (70.68%), Query Frame = 0 
Query:   15 SISQQYSFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYE---SLKQKAEPYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEE 278
            ++  +  F   LL G  AGT+VD++LFPLDTIKTRLQ++ GF+KAGGFRGVY GL AAAAGSAPG +LFF  YE   SL   A P   ++++PLVHMAAA+ GE  ACLVR PTE VKQ +Q G Y +  EA+  I   + + GFYRG+ S + RE+PFSFIQFP++E  K  WS +Q  P+S  Q A CGS AG +AA+ TTPLDV+KTRL+L KD  G  Y G ++   RV  +EG + LFSG+ PR MWI+IGGFV+FG YE+
Sbjct:    7 NVPPERGFFPALLGGAVAGTSVDIALFPLDTIKTRLQSAHGFFKAGGFRGVYSGLSAAAAGSAPGGALFFGTYETSKSLLGMAAP--NQKHSPLVHMAAAASGEMAACLVRTPTEIVKQRMQTGVYKSLPEALNAIRMADDIAGFYRGYWSMIAREIPFSFIQFPLWEGLKYQWSKQQNAPVSSLQGAICGSIAGGVAASTTTPLDVVKTRLMLGKDAKGVPYKGTLNTLSRVYTDEGLRRLFSGVGPRTMWISIGGFVFFGMYEK 270
[Close]
BLAST of NO12G01690 vs. NCBI_GenBank
Match: XP_008618004.1 (hypothetical protein SDRG_13686 [Saprolegnia diclina VS20] >XP_012203465.1 hypothetical protein SPRG_08846 [Saprolegnia parasitica CBS 223.65] >EQC28607.1 hypothetical protein SDRG_13686 [Saprolegnia diclina VS20] >KDO25905.1 hypothetical protein SPRG_08846 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 292.0 bits (746), Expect = 2.100e-75
Identity = 151/266 (56.77%), Postives = 191/266 (71.80%), Query Frame = 0 
Query:   21 SFMSNLLAGGAAGTAVDVSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAE---PYVAKEYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAKEGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAACGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGGKTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLS 284
            SF ++L+AGG AGT+VDV+LFPLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGA+LFFS YE+ K+  +   P++A   +P +HM AA+ GET ACLVRVPTE VKQN+Q G       +++ + A  G+ GFYRG+ S + RE+PFSFIQFP++E  KA WS +QG  +S  Q              +TTPLDV+KTRL+L KD +G +Y G+ D F RV  EEG + LFSG+ PR MWI+IGGFV+FGAYE     LS
Sbjct:   10 SFFTSLVAGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETAKEALQTHLPHMAN--SPFIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSIKTLHAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSAKQGEQVSALQGXXXXXXXXXXXXXITTPLDVVKTRLMLGKDANGVEYRGMKDTFMRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETASASLS 273
The following BLAST results are available for this feature:
BLAST of NO12G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25873.16.900e-11983.08s-adenosylmethionine mitochondrial carrier protein... [more]
XP_005856104.12.500e-9775.51s-adenosylmethionine mitochondrial carrier protein... [more]
CBN75663.15.300e-8762.17conserved unknown protein [Ectocarpus siliculosus][more]
OQR95780.11.000e-8560.37S-adenosylmethionine mitochondrial carrier protein... [more]
XP_009822865.11.400e-8460.53hypothetical protein H257_01389, partial [Aphanomy... [more]
XP_008870135.14.200e-8460.75hypothetical protein H310_06745 [Aphanomyces invad... [more]
OWZ21214.12.600e-7858.69Mitochondrial substrate carrier [Phytophthora mega... [more]
OQR97073.12.500e-7657.89S-adenosylmethionine mitochondrial carrier protein... [more]
XP_002999259.11.200e-7556.02S-adenosylmethionine mitochondrial carrier protein... [more]
XP_008618004.12.100e-7556.77hypothetical protein SDRG_13686 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010089NSK010089Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01690.1NO12G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592151gene_5327Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100054g28gene4653Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01690.1NO12G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01690 ID=NO12G01690|Name=NO12G01690|organism=Nannochloropsis oceanica|type=gene|length=1716bp
ACAGCACCAACACAAGCTCATCTACAACACAAGCAGCATGGCAGAATCCA
GCTTTGAGCAAACGGCCGCACCACCGTGCTCTATTTCTCAACAATACTCG
TTCATGAGCAACCTGCTGgtaagtccgcacgtgtagagaaagtgggcggg
tttggattgagggagggggggatactacccgtacgcctcgcggagatcga
tcttgtgaaccggcgcagcctccctagccacagctacgcacgcttatgtg
cctcttagcatatgctgtcagttttttttttagagtaggctaatggaaga
gtcatcccatgactcacatgtagctcccctttcctccctgaacctcccgc
gctacccgcgctacttatgtagGCAGGGGGTGCGGCGGGGACGGCCGTGG
ACGTTTCCCTCTTCCCGCTTGACACCATCAAGACGCGgtaagcttgctta
gaacacaaacagatgtctcgatcataagagaggaggtcgctcttctgtta
tttggaaggaggattaactaactcatttattccctcgtccgcccccccct
caactcacccaccacttcgctacagGTTACAAGCGTCGGAAGGATTTTGG
AAAGCTGGTGGCTTCCGCGGAGTCTACAAAGGCTTAGGCGCTGCCGCCGC
CGGCTCCGCGCCGGGGGCCTCTCTTTTCTTCTCAATCTACGAGTCACTTA
AACAAAAAGCAGAGCCATATGTAGCCAAGGAGTATGCGCCCTTAGTGCAC
ATGGCAGCGGCGTCGTTCGGAGAGACAGGGGCATGCTTAGTGAGGGTGCC
AACGGAAAACGTAAAGCAGAACTTACAGGCGGGGCGATACGCGACTCAGG
GAGAGGCCATGAGGATGATTATGGCGAAGGAGGGGTTGATGGGTTTTTAC
AGAGGCTTCTTGTCCACAGTCTTTCGGGAGgtaaggagggaggaagagag
gtaggggagagaaagatagggcgtgaggcagaatttgcagagaggtagag
tccagactcagtcgcagggaagaagggagggaaagcggaagggagggatt
atgcgtggggtatgtccgattcactacttgtttttcttttcactagtaag
tgatcatgacgacctcaaagtcacctgtacctttgccccctcccttcctc
ggaagGTTCCCTTCTCTTTCATCCAGTTCCCCATCTATGAAGCAGCCAAA
GCCGCCTGGTCCCACGAACAAGGGACGCCCATCTCCCCCTTCCAAGCAGC
AGCGTGTGGGAGTTTCGCCGGGGCTATCGCGGCAGCTATGACCACTCCAC
TGGACGTGATTAAAACGAGGTTAATTTTGGAAAAAGACGTGCATGGTAGG
AAGTACACAGGGATCGTGGATGTGTTCAGGAGGGTAGTGAAGGAGGAAGG
AGGGAAGACTTTGTTCAGCGGGTTGGCACCGCGAGTAATGTGGATTACGA
TTGGCGGGTTTGTGTACTTCGGGGCGTATGAGGAGGTGAGGCGCTTGCTG
TCGCCGGTATTCCCGCTCTCGACGATCTAGAGTTAGAGATGATGGTTGTT
AGGAAGGAAGGTGGTTGTTAGGGAGGAATGAGAAGGTACGAGTGGCCGTT
GTATGTACATAGAGATAGGGAGTCTTCCGCATTGGAAGACATCGATCGAT
CGATAAATGTAAACTAAATATACGTCCGTCATCTTTAAATAAAGCCCAAC
GAAAAACAGTACCGCC
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protein sequence of NO12G01690.1

>NO12G01690.1-protein ID=NO12G01690.1-protein|Name=NO12G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MAESSFEQTAAPPCSISQQYSFMSNLLAGGAAGTAVDVSLFPLDTIKTRL
QASEGFWKAGGFRGVYKGLGAAAAGSAPGASLFFSIYESLKQKAEPYVAK
EYAPLVHMAAASFGETGACLVRVPTENVKQNLQAGRYATQGEAMRMIMAK
EGLMGFYRGFLSTVFREVPFSFIQFPIYEAAKAAWSHEQGTPISPFQAAA
CGSFAGAIAAAMTTPLDVIKTRLILEKDVHGRKYTGIVDVFRRVVKEEGG
KTLFSGLAPRVMWITIGGFVYFGAYEEVRRLLSPVFPLSTI*
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