NO12G01360, NO12G01360 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01360 vs. NCBI_GenBank
Match: EWM25864.1 (hypothetical protein Naga_100054g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 440.3 bits (1131), Expect = 8.300e-120 Identity = 269/510 (52.75%), Postives = 318/510 (62.35%), Query Frame = 0
Query: 2 DVEILSNQASNALPMHIKGYPVTRQANLLQIW----GRREGMGGKEMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSLSSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKPFRPLFEKSSFRLCACVMWLPNGVGCLAGFANGAVRILGLPEDVVKVRLYRHEAPVYDGVRGLDAVF---LKGHVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNFRVMVMDKEGLIPRRMGGQMTKTCLLTLMSVRGKNGXXXXXXXXXXXXXXXXXXXXXXXGRLTCELSWLRAPLKGESVEVSPAGVPDAPVRAGLAVTRVIIDEEGDPFAAVGGFSGLCRFVGLRAFL 505
DVE++ +A + +H+KG P TR+ NLLQIW G G +LY + H FGPVWD RWLP EV E G G DV+G+LVAVFGDG ARVY+LP P XXXXXXXXXXXXXXXXXXXXXX GTCLT+VR SPHDP LLCGATNGMALLYRL +P L+S P+ P+ L PPPP +L P RRF+DAREAPLPSLS+VD +AWHPT P LFV GGHDC+LRLWD+RKPFRP+ E+ SFRLC WLPNGVGCLAGFANGAVR+LGLPE+ ++VR YRHEAPVYDGV LDAVF ++G V G VMV+DKEGLIPRR+G T+TCL+TLM++RG + RLTC+L++ +AP++GE VEVSP+GVP PVR GL RV++D GDP VGGFSGL RF+G+R FL
Sbjct: 81 DVEVM-EEAPGSPRLHVKGRP-TREMNLLQIWAVEGGXXXXQKGGSATLLYAIEHAFGPVWDARWLPAEVLGENG---GTEDVMGSLVAVFGDGSARVYVLPLP-----PRXXXXXXXXXXXXXXXXXXXXXXPRGTCLTTVRPSPHDPSQLLCGATNGMALLYRLELP--------------------LLSCPFPSLPA----LSPPPPR----------RLFPARRFYDAREAPLPSLSAVDAVAWHPTLPDLFVTGGHDCSLRLWDLRKPFRPVVERGSFRLCQTTAWLPNGVGCLAGFANGAVRLLGLPEEALRVRFYRHEAPVYDGVTALDAVFDPAVEGAV---------------------------VVSVGKDGKMAVMVVDKEGLIPRRVGTAPTRTCLMTLMTLRGGD----RAVPGKHADCEDAGGKETETRRLTCDLTFAKAPVRGELVEVSPSGVPQVPVRVGLTAARVVMDGRGDPLVGVGGFSGLGRFLGIRRFL 515
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETL89621.1 (hypothetical protein L917_11472 [Phytophthora parasitica]) HSP 1 Score: 68.2 bits (165), Expect = 8.500e-8 Identity = 66/279 (23.66%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R E + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPETLTGKRGETEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERVEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETM35617.1 (hypothetical protein L914_17512 [Phytophthora parasitica]) HSP 1 Score: 68.2 bits (165), Expect = 8.500e-8 Identity = 66/279 (23.66%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R E + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPETLTGKRGETEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERVEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETO71623.1 (hypothetical protein F444_12060 [Phytophthora parasitica P1976]) HSP 1 Score: 68.2 bits (165), Expect = 8.500e-8 Identity = 66/279 (23.66%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R E + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPETLTGKRGETEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERVEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETP33434.1 (hypothetical protein F442_18040 [Phytophthora parasitica P10297]) HSP 1 Score: 67.8 bits (164), Expect = 1.100e-7 Identity = 66/279 (23.66%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R E + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPETLTGKRGETEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERAEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETI42988.1 (hypothetical protein F443_11971 [Phytophthora parasitica P1569]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 66/279 (23.66%), Postives = 99/279 (35.48%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R E + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPETLTGKRGKTEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVVEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERVEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: XP_008908229.1 (hypothetical protein PPTG_12776 [Phytophthora parasitica INRA-310] >ETN06737.1 hypothetical protein PPTG_12776 [Phytophthora parasitica INRA-310]) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-7 Identity = 65/279 (23.30%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R + + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPKTLTGKRGKTEKKPAKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERAEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: KUF64558.1 (General transcription factor 3C polypeptide 2 [Phytophthora nicotianae]) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-7 Identity = 65/279 (23.30%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R + + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPKTLTGKRGKTEKKPAKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERAEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: KUF92192.1 (Elongation of very long chain fatty acids protein 2 [Phytophthora nicotianae]) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-7 Identity = 65/279 (23.30%), Postives = 100/279 (35.84%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----RREGMGGK---------EMVMLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW R + + GK + ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQRPKTLTGKRGKTEKKPAKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERAEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449
BLAST of NO12G01360 vs. NCBI_GenBank
Match: ETK75721.1 (hypothetical protein L915_17719 [Phytophthora parasitica]) HSP 1 Score: 65.9 bits (159), Expect = 4.200e-7 Identity = 65/279 (23.30%), Postives = 99/279 (35.48%), Query Frame = 0
Query: 12 NALPMHIKGYPVTRQANLLQIWG----------RREGMGGKEMV---MLYGVGHTFGPVWDVRWLPREVWWEEGKEEGKRDVLGALVAVFGDGRARVYLLPTPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCLTSVRVSPHDPGLLLCGATNGMALLYRLHIPTAAAAASLAAARTDSMHSDDLISRPYSPPPSFASFLRPPPPHSPSPFPSFSLQLHPTRRFFDAREAPLPSL-------SSVDVIAWHPTHPHLFVAGGHDCALRLWDMRKP 271
N P H P + + NL+QIW + G K+ V ++Y + H G WD++W P + + K + ++LG L A FGDG RV+ +P + SV+ SPH LLL G ++G L+ + ++ SD L P P + P RRF DA ++ +AW P HLF G+D ++WD+R+P
Sbjct: 214 NTPPDHYYDVPESAR-NLIQIWAVPVQPPETLTGKRGETEKKPVKPRLVYAIDHESGVAWDLQWCP--LVKKFPKSPRRENILGILAACFGDGSVRVFEVP---MIPEERLQLNIGKEQRLVDKNIPIVVAKLPRIMQLSVQWSPHTWNLLLTGGSDGSVSLWNI--------------KSTVSESDSLGDERAEPEP-----------------------IEPQRRFQDADTIGKQEAFDWGCGWVAIRAVAWSPFDEHLFATTGNDSVFKVWDVREP 449 The following BLAST results are available for this feature:
BLAST of NO12G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01360 ID=NO12G01360|Name=NO12G01360|organism=Nannochloropsis oceanica|type=gene|length=1518bpback to top protein sequence of NO12G01360.1 >NO12G01360.1-protein ID=NO12G01360.1-protein|Name=NO12G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bpback to top Synonyms
Publications
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