NO12G00600, NO12G00600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00600 vs. NCBI_GenBank
Match: XP_005856027.1 (hypothetical protein NGA_0514600 [Nannochloropsis gaditana CCMP526] >EKU20320.1 hypothetical protein NGA_0514600 [Nannochloropsis gaditana CCMP526] >EWM25966.1 Protein of unknown function DUF3464 [Nannochloropsis gaditana]) HSP 1 Score: 309.3 bits (791), Expect = 1.300e-80 Identity = 206/318 (64.78%), Postives = 229/318 (72.01%), Query Frame = 0 Query: 1 MPAASSRGPPAILVPILLILVLLPSFITAFLLPTLPFSSSFFPPSSILQSRRHSSTAPSSFSPLHPPSL--------PFRAAADDNKD----QPPTPKGFAKKQXXXXXXXXXXXXXXXXXXXXXXXEPDNPLAASQASLDELDRLSARQKRSYWEIQAEMEREMDMREIAEYKETQRLLDEGIVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRREESAKKKLEKYSGTQAPNRAKRRELDRLTK 307 MPAA SR + L P+ AF P S PS LQSRRH PS+F P +P +L P AAA++ + PKGF +K XXXXXXXXXXXXXX ASL ELDRL+ARQK++YWEIQ EMEREMDMREI EYKETQRLLDEG+VG LPE+ISNRMLKRLLPF PVLGGI LFGF+LYLAKNTEIDVPPAFVAFSTQVPFLAAL GI+YSIMSTSW+PEVEGSFWGFTEFKANVLNLLDSLQKT+REESAK+K+EKYSG++ PNRAKRRELDRL+K Sbjct: 1 MPAAKSRRSRLSYRCLGAFFALAPAPGAAF----APLSM----PSPFLQSRRH---VPSAFFP-NPSTLPTPFASVFPLHAAAEEQESGQGKSSSGPKGFGRK---TPAQEPSXXXXXXXXXXXXXXXXXXXXXXXXASLQELDRLNARQKKTYWEIQKEMEREMDMREIDEYKETQRLLDEGVVGYLPERISNRMLKRLLPFILFPVLGGIGLFGFYLYLAKNTEIDVPPAFVAFSTQVPFLAALVGITYSIMSTSWEPEVEGSFWGFTEFKANVLNLLDSLQKTKREESAKEKMEKYSGSRGPNRAKRRELDRLSK 303
BLAST of NO12G00600 vs. NCBI_GenBank
Match: CBN78153.1 (all0748 [Ectocarpus siliculosus]) HSP 1 Score: 99.4 bits (246), Expect = 2.100e-17 Identity = 62/172 (36.05%), Postives = 99/172 (57.56%), Query Frame = 0 Query: 132 DRLSARQKRSYWEIQAEMEREMDMREIAEYKETQRLLDEG--IVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRREESAKKKLEKYSGTQAPNRAKRREL 302 D++SAR++ E + E ER +E + + EG G++PE +SNRML R++PF +P LGG+ +F L+ + +P VA++TQ PF ALAGI+Y+IMS SWD + EG+F+GF E K N N+++ L+++ + L + NR +RR++ Sbjct: 142 DQVSARKEIERMEAE-ERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQE-RMSMNRRQRRQM 311
BLAST of NO12G00600 vs. NCBI_GenBank
Match: PSC76318.1 (hypothetical protein C2E20_0864 [Micractinium conductrix]) HSP 1 Score: 95.1 bits (235), Expect = 4.000e-16 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 166 RLLDEGIVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQK 274 R ++ G +PE +++RMLKR++ F PV GGI LF FF +L EID+P S+ + F L GISY IMS SWDP EGS G+TEF+ANV L+D ++ Sbjct: 111 RNVEYGSTAAVPEVVTDRMLKRVILFMGTPVFGGIMLFPFFYWLKIKQEIDLPNWVAYVSSSLTFGGGLLGISYGIMSASWDPRREGSLLGWTEFQANVPLLMDRFKR 218
BLAST of NO12G00600 vs. NCBI_GenBank
Match: PRW33988.1 (hypothetical protein C2E21_7297 [Chlorella sorokiniana]) HSP 1 Score: 92.0 bits (227), Expect = 3.300e-15 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 166 RLLDEGIVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQK 274 R ++ G +PE +++RMLKR++ F PV GGI LF F YL +D+P ++ + F L GI+Y IMS SWDP EGS G+TEF+ANV LLD ++ Sbjct: 116 RTVEYGSTAAVPEVVTDRMLKRVIIFMGTPVFGGILLFPLFYYLKVKQGLDLPNWVAYLTSSITFGGGLLGITYGIMSASWDPRREGSLLGWTEFQANVPLLLDRFRR 223
BLAST of NO12G00600 vs. NCBI_GenBank
Match: XP_005849088.1 (hypothetical protein CHLNCDRAFT_143598 [Chlorella variabilis] >EFN56986.1 hypothetical protein CHLNCDRAFT_143598 [Chlorella variabilis]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 176 LPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQK 274 +PE ++NRML+R++ F PV GGI LF FF +L +D+P S+ + F L GISY IMS SWDP EGS G+TEF+ANV LLD ++ Sbjct: 96 VPEVVTNRMLRRVILFMGTPVFGGILLFPFFYWLKIKQGVDLPNWVAYLSSSLTFGGGLLGISYGIMSASWDPRREGSLLGWTEFQANVPLLLDRFKR 193
BLAST of NO12G00600 vs. NCBI_GenBank
Match: XP_002178809.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49507.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = 0 Query: 148 EMEREMDMREIAEYKETQRLLD-----EGIVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRR------------EESAKKKLEKYSGTQAPNRAKRRELDRLTK 307 +M R+ ++ AE ++ + LLD + +PE+++ RM R+LPF +P G+ +F F Y+A ++ PA VA ST V L L GI+YSI+S SWDP+ EGS G EF N+ N+ D L+++R E +K ++ A ++ + + LDR K Sbjct: 109 DMRRQQAEKKDAELRKVRELLDADQQVQEAAAAIPERVAQRMGARMLPFVGLPFFLGMGVFVGFWYMATYRNLEYQPALVAASTIVVLLLGLVGITYSILSASWDPDREGSLLGTDEFSKNIENIRDGLKRSRENAILRDKMAGLTSEELQKSIKDLERRDAASQRREQSLDRKLK 284
BLAST of NO12G00600 vs. NCBI_GenBank
Match: XP_005849087.1 (hypothetical protein CHLNCDRAFT_57385 [Chlorella variabilis] >EFN56985.1 hypothetical protein CHLNCDRAFT_57385 [Chlorella variabilis]) HSP 1 Score: 91.3 bits (225), Expect = 5.700e-15 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 177 PEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQK 274 PE ++NRML+R++ F PV GGI LF FF +L +D+P S+ + F L GISY IMS SWDP EGS G+TEF+ANV LLD ++ Sbjct: 135 PEVVTNRMLRRVILFMGTPVFGGILLFPFFYWLKIKQGVDLPNWVAYLSSSLTFGGGLLGISYGIMSASWDPRREGSLLGWTEFQANVPLLLDRFKR 231
BLAST of NO12G00600 vs. NCBI_GenBank
Match: KOO23857.1 (hypothetical protein Ctob_003461 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-14 Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 0 Query: 174 GNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRREESAKKKLEKYSGTQAPNRAKRR 300 G +PE +S RMLKR++PF +PV GG+ F F Y E+D+PP VAF+TQ L + AGI+Y +MSTSWD EGS G+ N+ ++ Q+ R AK+ E+ +A R R+ Sbjct: 139 GVMPEVVSQRMLKRVVPFAGLPVFGGLLTFVGFYYANTQLELDLPPQIVAFTTQALLLLSFAGITYGVMSTSWDENEEGSLLGWENVGPNIASMQG--QEMDRIAEAKRDAEESDAEKAGIRMGRK 262
BLAST of NO12G00600 vs. NCBI_GenBank
Match: XP_002292222.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90197.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 88.6 bits (218), Expect = 3.700e-14 Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 0 Query: 150 EREMDMREIAEYKETQRLLDEG-IVGNLPEQISNRMLKRLLPFTFVPVLGGIALFGFFLYLAKNTEIDVPPAFVAFSTQVPFLA-ALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRREESAKKKL 285 +R+ +++++ + + T LL E +PE+++ RM KR+LPF VP+ G A F F Y A +++ PA VA ST FLA L GI+YS+MS+SWD + EGS GF EF NV +L + L +T+ ++K+ Sbjct: 96 QRDAELQKLRDLRATDSLLKEDPNAAAIPEKVAQRMGKRMLPFVGVPLFGTFATFIGFWYAAVYKDMEFQPAIVA-STSFVFLAIGLLGITYSVMSSSWDEDREGSGLGFDEFSKNVDSLKEGLSRTKENALLREKM 231
BLAST of NO12G00600 vs. NCBI_GenBank
Match: CEM05219.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.8 bits (216), Expect = 6.300e-14 Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 0 Query: 174 GNLPEQISNRMLKRLLPFTFVPVLGGIALF--GFFLYLAKNTEIDVPPAFVAFSTQVPFLAALAGISYSIMSTSWDPEVEGSFWGFTEFKANVLNLLDSLQKTRREESAKKKLE 286 G +PE +S R++ R++PF P+ + F GF LY + + P+ +A+ TQ FL AL G+SY I+S+SW+ + EGSFWG EFK N+ + +++T ++ ++++E Sbjct: 117 GTMPEVVSQRIISRIVPFFLTPLAFAFSTFIGGFLLY--SQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQTVKDTETRQRME 228 The following BLAST results are available for this feature:
BLAST of NO12G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00600 ID=NO12G00600|Name=NO12G00600|organism=Nannochloropsis oceanica|type=gene|length=1848bpback to top protein sequence of NO12G00600.1 >NO12G00600.1-protein ID=NO12G00600.1-protein|Name=NO12G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top Synonyms
Publications
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