NO11G03570, NO11G03570 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03570
Unique Name	NO11G03570
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5094
Alignment location	chr11:1145837..1150930 +

Link to JBrowse

Properties


Property Name	Value
Description	heat shock protein 70 (Hsp 70) family protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:1145837..1150930 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013126	Hsp_70_fam

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding

Homology

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BLAST of NO11G03570 vs. NCBI_GenBank
Match: EWM24828.1 (sse2p [Nannochloropsis gaditana])

HSP 1 Score: 290.8 bits (743), Expect = 1.000e-74
Identity = 157/245 (64.08%), Postives = 178/245 (72.65%), Query Frame = 0

Query:   24 APLSSFLLRHASILLFLLVAVHGNLLTPISLGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGLLNMKAG 269
            AP SS       +L +LL+    +LLTPISLGIDLGNHKSVVALAQGHGIDVHVN M RRETPSAVL RGRRR FGDLALAGAGAAP S V+ LRRLL   L + D+D                       V E FGA ++G GG +DPC VGP+++V H GR + LSA QV+AM ++HLRK VEAAHGD NVLNTV+SVPAWFGR+QRALVVDAAR+A C SPA VTDGTALALGYGLLN+  G
Sbjct:   55 APASSVSFLPLLLLTYLLLHADASLLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDED-----------GGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLLNVVRG 288

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BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_018438387.1 (PREDICTED: heat shock 70 kDa protein 16 [Raphanus sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.400e-47
Identity = 168/524 (32.06%), Postives = 234/524 (44.66%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P  V F  ++R  G  A A A   PKS ++ L+RL+G   R  D  +  R                      PF      +  ED     G QI++R++G     S  Q++ MLLSHL K+V      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVFVDIGH  TQV VA       +VL+H  DR +G    D  L+                                           KE+ S     + +A  RL A C K+KK LSAN EA L +ECL+E  +DV   I R+E E   + L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPGMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQKDLRMF--------------------PF------ETSEDSAADGGIQIRLRYMGEVQSFSPVQILGMLLSHL-KQVAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDCTATALGYGIYKTDLAANSSPTCIVFVDIGHCDTQVCVASFGSGSMRVLSHGSDRNLGGRDFDEVLFNYFAV------------------------------------EFKEKYSIDVYTNTKACVRLRAACEKVKKVLSANAEAPLNIECLME-EKDVKSFIKREEFEHLSSGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPIFRV-RDYEVQDSFPFSIGFSSDKGPINTPSNE-----MLFPKG 423

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BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_013697368.1 (heat shock 70 kDa protein 16 [Brassica napus] >XP_022558974.1 heat shock 70 kDa protein 16 [Brassica napus] >CDY49794.1 BnaCnng18070D [Brassica napus])

HSP 1 Score: 199.1 bits (505), Expect = 4.000e-47
Identity = 166/524 (31.68%), Postives = 235/524 (44.85%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P  V F  ++R  G  A A A   PKS ++ L+RL+G   R  D  +  +                      PF          +D    G QI++R++G     S  Q++ MLLSHL K+V     ++ V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVFVDIGH  TQV VA       +VL+H  DR +G    D  L+                                           KE+ S     + +A  RL A C K+KK LSAN EA L +ECL+E  +DV   I R+E E+  + L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPGMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQKDLKLF--------------------PFET-------SEDSADGGIQIRLRYMGEVQSFSPVQILGMLLSHL-KQVAEKSLNTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDCTATALGYGIYKTDLAANSSPTCIVFVDIGHCDTQVCVASFGSGSMRVLSHGSDRNLGGRDFDEVLFNYFAV------------------------------------EFKEKYSIDVYTNTKACVRLRASCEKVKKVLSANAEAPLNIECLME-EKDVKSFIKREEFEQLSSGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPIFRV-RDYEVQDSFPFSIGFSSDKGPINTPSNE-----MLFPKG 422

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: EOA39731.1 (hypothetical protein CARUB_v10008380mg [Capsella rubella])

HSP 1 Score: 197.6 bits (501), Expect = 1.200e-46
Identity = 166/524 (31.68%), Postives = 235/524 (44.85%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GID+ +N  S RE P+ V F  ++R  G  A A A   PKS ++ L+RL+G   R  D     R                      PF        G D     G  I++R++G     S  Q++ MLLSHL K++      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVF+DIGH  TQV VA       +V +HA+DR +G    D  L+    +                                      KE+ S     + +A  RL A C KLKK LSAN EA L +ECL+E  +DV   I R+E E+  A L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDILLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQNDLRLF--------------------PFET----SEGSDG----GILIQLRYMGEMQGFSPVQILGMLLSHL-KQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALGYGIYKTDLAANASPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLFNHFAA------------------------------------EFKEKYSIDVYTNTKACVRLRASCEKLKKVLSANAEAQLNIECLME-EKDVKSFIKREEFEQLSAGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPVFRV-RDYEVQDSFPFSVGFSSDKGPISTPSNE-----LLFPKG 421

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_006306834.1 (heat shock 70 kDa protein 16 [Capsella rubella] >EOA39732.1 hypothetical protein CARUB_v10008380mg [Capsella rubella])

HSP 1 Score: 197.6 bits (501), Expect = 1.200e-46
Identity = 166/524 (31.68%), Postives = 235/524 (44.85%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GID+ +N  S RE P+ V F  ++R  G  A A A   PKS ++ L+RL+G   R  D     R                      PF        G D     G  I++R++G     S  Q++ MLLSHL K++      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVF+DIGH  TQV VA       +V +HA+DR +G    D  L+    +                                      KE+ S     + +A  RL A C KLKK LSAN EA L +ECL+E  +DV   I R+E E+  A L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDILLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQNDLRLF--------------------PFET----SEGSDG----GILIQLRYMGEMQGFSPVQILGMLLSHL-KQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALGYGIYKTDLAANASPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLFNHFAA------------------------------------EFKEKYSIDVYTNTKACVRLRASCEKLKKVLSANAEAQLNIECLME-EKDVKSFIKREEFEQLSAGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPVFRV-RDYEVQDSFPFSVGFSSDKGPISTPSNE-----LLFPKG 421

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: EFH66144.1 (hypothetical protein ARALYDRAFT_888478 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 197.2 bits (500), Expect = 1.500e-46
Identity = 168/524 (32.06%), Postives = 235/524 (44.85%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P+ V F  ++R  G  A A A   PKS ++ L+RL+G   R  D     R                      PF       G        G QI++R++G     S  Q++ MLLSHL K++      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVF+DIGH  TQV VA       +V +HA+DR +G    D  L+                             H   E         KE+ +     + +A  RL A C KLKK LSAN EA L +ECL+E  +DV   I R+E E+  A L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P  +   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQNDLRLF--------------------PFETSEDSDG--------GIQIQLRYMGEIQSFSPVQILGMLLSHL-KQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALGYGIYKTDLAANSSPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLF----------------------------NHFAVE--------FKEKYNIDVYTNTKACVRLRASCEKLKKVLSANAEAQLNIECLME-EKDVKSFIKREEFEKLSAGLLERLIVPCQKAL-------------ADSGLSLDHIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPVFRV-RDYEVQDSFPFAIGFSSDKGPINTPSNE-----LLFPKG 421

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_013587185.1 (PREDICTED: heat shock 70 kDa protein 16 [Brassica oleracea var. oleracea])

HSP 1 Score: 197.2 bits (500), Expect = 1.500e-46
Identity = 166/524 (31.68%), Postives = 234/524 (44.66%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P  V F  ++R  G  A A A   PKS ++ L+RL+G   R  D  +  +                      PF        G       G QI++R++G     S  Q++ MLLSHL K+V     ++ V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVFVDIGH  TQV VA       +VL+H  DR +G    D  L+                                           KE+ S     + +A  RL A C K+KK LSAN EA L +ECL+E  +DV   I R+E E+  + L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPGMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQKDLKLF--------------------PFETSEASADG-------GIQIRLRYMGEVQSFSPVQILGMLLSHL-KQVAEKSLNTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDCTATALGYGIYKTDLAANSSPTCIVFVDIGHCDTQVCVASFGSGSMRVLSHGSDRNLGGRDFDEVLFNYFAV------------------------------------EFKEKYSIDVYTNTKACVRLRASCEKVKKVLSANAEAPLNIECLME-EKDVKSFIKREEFEKLSSGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLNSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPIFRV-RDYEVQDSFPFSIGFSSDKGPINTPSNE-----MLFPKG 422

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_020866928.1 (heat shock 70 kDa protein 16 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 197.2 bits (500), Expect = 1.500e-46
Identity = 168/524 (32.06%), Postives = 235/524 (44.85%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P+ V F  ++R  G  A A A   PKS ++ L+RL+G   R  D     R                      PF       G        G QI++R++G     S  Q++ MLLSHL K++      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVF+DIGH  TQV VA       +V +HA+DR +G    D  L+                             H   E         KE+ +     + +A  RL A C KLKK LSAN EA L +ECL+E  +DV   I R+E E+  A L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P  +   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQNDLRLF--------------------PFETSEDSDG--------GIQIQLRYMGEIQSFSPVQILGMLLSHL-KQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALGYGIYKTDLAANSSPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLF----------------------------NHFAVE--------FKEKYNIDVYTNTKACVRLRASCEKLKKVLSANAEAQLNIECLME-EKDVKSFIKREEFEKLSAGLLERLIVPCQKAL-------------ADSGLSLDHIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPVFRV-RDYEVQDSFPFAIGFSSDKGPINTPSNE-----LLFPKG 421

[Close]

BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_009148495.1 (PREDICTED: heat shock 70 kDa protein 16 [Brassica rapa] >XP_009148496.1 PREDICTED: heat shock 70 kDa protein 16 [Brassica rapa])

HSP 1 Score: 196.4 bits (498), Expect = 2.600e-46
Identity = 165/524 (31.49%), Postives = 234/524 (44.66%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P  V F  ++R  G  A A A   PKS ++ L+RL+G   +  D  +  +                      PF          +D    G QI++R++G     S  Q++ MLLSHL K+V      + V + VI +P++F  +QR   +DAA +A      ++ D TA ALGYG+   ++ A      IVFVDIGH  TQV VA       +VL+H  DR +G    D  L+                                           KE+ S     + +A  RL A C K+KK LSAN EA L +ECL+E  +DV   I R+E E+  + L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P ++   S KG +  P  E      L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPGMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFKEPDVQKDLKLF--------------------PFET-------SEDSADGGIQIQLRYMGEVQSFSPVQILGMLLSHL-KQVAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDCTATALGYGIYKTDLAANSSPTCIVFVDIGHCDTQVCVASFGSGSMRVLSHGSDRNLGGRDFDEVLFNYFAV------------------------------------EFKEKYSIDVYTNTKACVRLRASCEKVKKVLSANAEAPLNIECLME-EKDVKSFIKREEFEKLSSGLLERLIVPCQKAL-------------ADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPIFRV-RDYEVQDSFPFSIGFSSDKGPINTPSNE-----MLFPKG 422

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BLAST of NO11G03570 vs. NCBI_GenBank
Match: XP_010458573.1 (PREDICTED: heat shock 70 kDa protein 16 [Camelina sativa])

HSP 1 Score: 196.4 bits (498), Expect = 2.600e-46
Identity = 170/524 (32.44%), Postives = 237/524 (45.23%), Query Frame = 0

Query:   54 LGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGDLALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMARXXXXXXXXXXXXXXXXXXCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLLSHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVVTDGTALALGYGL--LNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLAHAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQEKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLECLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGREGEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPSSLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTMEVRSGKGRLLLPRLERGSAYALYPKG 576
            +G D+GN   V+A+A+  GIDV +N  S RE P+ V F  ++R  G  A A A   PKS ++ L+RL+G   R  D     R                      PF A      G D     G QI++R++G     S  Q++ MLLSHL++  E +   + V + VI +P++F  AQR   +DAA +A      ++ D TA ALGYG+   ++ A      IVF+DIGH  TQV VA       +V +HA+DR +G    D  L+                             H   E         KE+ S     + +A  RL A C KLKK LSAN EA L +ECL++  +DV   I R+E E+  A L+ RL   C+ A+              + G+    I +VELVG GS IP +   + +  +                       L RT+NA+E VARGCAL  A+ S  FR+ R Y V D+ P  +   S KG      +   S   L+PKG
Sbjct:    4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKSTISQLKRLIGRKFREPDVQNDLRLF--------------------PFEA----SEGSDG----GIQIQLRYMGEIQRFSPVQILGMLLSHLKQTAEKSL-KTPVSDCVIGIPSYFTNAQRLAYLDAAAIAGLRPLRLMHDPTATALGYGIYKTDLAANSSPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLF----------------------------NHFAVE--------FKEKYSIDVYTNTKACVRLRASCEKLKKVLSANAEAQLNIECLMK-EKDVRSFIKREEFEQLSAGLLERLIVPCQKAL-------------ADSGLSLDHIHSVELVGSGSRIPAISKMLSSLFKR---------------------ELGRTVNASECVARGCALQCAMLSPVFRV-RDYEVQDSFPFAVGFSSEKG-----PINTTSNELLFPKG 421

The following BLAST results are available for this feature:

BLAST of NO11G03570 vs. NCBI_GenBank

BLAST of NO11G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24828.1	1.000e-74	64.08	sse2p [Nannochloropsis gaditana]	[more]
XP_018438387.1	1.400e-47	32.06	PREDICTED: heat shock 70 kDa protein 16 [Raphanus ...	[more]
XP_013697368.1	4.000e-47	31.68	heat shock 70 kDa protein 16 [Brassica napus] >XP_...	[more]
EOA39731.1	1.200e-46	31.68	hypothetical protein CARUB_v10008380mg [Capsella r...	[more]
XP_006306834.1	1.200e-46	31.68	heat shock 70 kDa protein 16 [Capsella rubella] >E...	[more]
EFH66144.1	1.500e-46	32.06	hypothetical protein ARALYDRAFT_888478 [Arabidopsi...	[more]
XP_013587185.1	1.500e-46	31.68	PREDICTED: heat shock 70 kDa protein 16 [Brassica ...	[more]
XP_020866928.1	1.500e-46	32.06	heat shock 70 kDa protein 16 [Arabidopsis lyrata s...	[more]
XP_009148495.1	2.600e-46	31.49	PREDICTED: heat shock 70 kDa protein 16 [Brassica ...	[more]
XP_010458573.1	2.600e-46	32.44	PREDICTED: heat shock 70 kDa protein 16 [Camelina ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL111	nonsL111	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR080	ncniR080	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008514	NSK008514	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G03570.1	NO11G03570.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|41951	gene_11274	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100234g5	gene5654	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G03570.1	NO11G03570.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G03570 ID=NO11G03570|Name=NO11G03570|organism=Nannochloropsis oceanica|type=gene|length=5094bp
AGTACACACACAGGTATCGGCGCGGCAACGACAATTACGAAACGCACGCA
ATAGGTCATAATGGAATCACCTACCTCCCCACCCCCGGCACCTTCCCTTC
GTCCTCCGTCTCGGCGCCGACAACGAGCAGCACCCCTGTCCTCCTTCCTC
CTGCGACATGCTTCCATCCTCCTCTTTCTCCTCGTCGCAGTTCACGGCAA
CTTGCTCACGCCAATATCCTTAGGCATCGACCTTGGCAACCACAAGAGgt
gagtcctcctttctgtaccttgctttcttcgttatccatcccgctgtcct
ccttccctcactccttcctccctctttccgcgcccgtacgttcacaatac
ctctcactcaagcagtcagcctggttcccttgatgcaagacctcattgca
agcgcctcctcgtcccctttgctatccattcaaccacctcggcactcact
cttcccaaacctgcccccccacagCGTGGTAGCCTTGGCCCAAGGGCACG
GCATTGACGTGCACGTCAATGCAATGAGCAGGCGGGAGACACCCTCGGCC
GTGCTCTTTCGAGGCCGACGACGCTTGTTTGGAGATTTGGCGCTGGCAGG
CGCCGGGGCAGCGCCAAAAAGTGTGGTCACGCACCTGCGACGGTTGTTAG
GGGCCGCGCTGAGGATAAAGGATGATGACGAGATGGCGAGGGAGGAAGGG
GAAGAAGAAGGGGTTGAAGAAGAGCAGGATGAAGAGGAGGACAAGTGTGT
TTTCGAACCCTTTGGAGCGGGATTGCTGGGAAAGGGGGGTGAGGATGACC
CTTGTCGTGTGGGGCCTCAGATAAAGGTGCGGCACGTAGGGAGAGACATT
GAGCTGAGCGCAGCCCAGGTAGTAGCGATGCTCTTGAGTCACCTCCGCAA
GGAGGTTGAGGCTGCGCACGGGGACAGCAATGTTTTGAATACTGTGATTA
GCGTTCCCGCCTGGTTCGGGCGGGCTCAGCGGGCCCTGGTGGTGGATGCG
GCGCGCGTTGCCCGCTGTCCGAGTCCAGCAGTTGTCACGGACGGAACGGC
TTTGGCCCTGGGGTATGGGCTCTTGAACATGgtgaggagtgtggcgaggg
aggaaaagggaggggagaagaatatatacacgctttagccgccgagatct
gcagctgcatgtcacgtgttgttgtcgtcgttgtggaatttccaacctct
caacttcccacgttaacgtattcgaatgactcacttccctccctcctttc
ttttcaccctctaacagAAGGCTGGAGAACCTGCTAAGGTGATTGTGTTC
GTAGACATAGGCCACGCGGGGACGCAAGTGACGGTTGCGAAGGTGTCGGG
GGAGGAGTGCAAGgtatggacggagggagagggagggcgattaaaaaagg
ggggcgaaatgatgcacttgctgataattgtttagacaccttatcttttg
cctatgcacatggttgtggtagGTGTTGGCGCACGCATGGGATCGGCGGG
TGGGATGTGACAGCATGGACCGGGCTCTCTACCGCCTCCTGCGGTCACGG
CAACCGTTGAGCTTGAGGGAGGGAGCGAAGGAGGGGGGGAAGGAGGGCAA
GGTGACCGGAGCGGGGGAGCATGAGCATCAGGAAAAAACTGAAGGATTAT
TTGGTCGAGGGAAGGAGGAGAGGAGCAGCAGCAGTACCTTATCTCCTCGA
GCACGGGCGCGGTTGCTGGCGGGGTGTGTGAAGCTCAAGAAGACCCTAAG
TGCCAACGTGGAGGCCTTTCTGACACTGGAGTGTTTGCTGGAGGGAGGGG
AAGACGTCTCCTTTAAGATTTCGCGGCAGGAGGCGGAGGAGGCGTGGGCT
CCGCTGGTTGCACGCTTGCGGAAACTGTGTCGGATGGCCATGCGACGAGC
GGAAGATGGAGAGAGGAAGGGAGGGAGGGAGGGAGAGGGTGGTGTGGGAA
AGCTGACGATCGATGCAGTAGAGCTGGTGGGAGGCGGATCTCATATCCCT
TGCTTACCGACAGCTATCGAGGCCGAGATGCGGGCATGGTCCTCGTCCTC
TTCTTCGCCCACTTCACAAGCCAACCCTTCTTCACTTCCTCCTCACCCTC
CTTTGCGCCGAACTCTGAACGCCGCTGAGGCCGTAGCGCGGGGGTGTGCC
TTGGCTGCGGCCTTGCACTCGGAGGCGTTCCGCATTTCCCGGCCATATGT
GGTGATGGATGCCCTTCCGCGCACTATGGAGGTTAGGAGTGGAAAGGGCA
GGCTGTTGCTGCCGCGACTTGAGCGGGGAAGTGCGTACGCACTCTATCCC
AAGGGAGGGTGGGAGGGCGGCGTGGAGATAGATGGAGAAGAGGACGAGGA
GGAGGGAGGAGTGGAAGGAGGGGGCGGGATTGAGGTGCGGGTGGAGGAGG
AGGGAAGCGGGCTGGTGGCGGCTCGAGGTTTTTCTAGGCTCTTCTCGAAG
TTGTTGGCGCCGGAGATGGAGGAGGAGGCGGGGGGGGAGGGATAGGGAAG
GAAAGGATCACCACGCGCGTGAAGCTGGATGCGTGGGGTCGGCCATCTGT
GGGTCCATTGCAGATTACCCGAAAGGTATTGAAGGAGAAGGAGAGGGAGG
GCGTGGAGGAGGAAGGGGTAGAGAAGGAGGTGGAGGAAGTGGAGGAGGAG
GAAGAGGTGCTGGGCGCGGAGTGGGAGGCCGGAGCGTTACCTTCCAGGGA
GGAGCTGGAGGCTGCAGAGGCTTTGGAGGAGGCCATGGCGGGAGCGGACC
GAGAAGTCGAGGAATGTTTGGATGCTCGAAATGCCTTGGAAGCTCTCGTG
TATCGCTGCAAGGGGGGGGAGGAGCCAGGAGCAGGCGCCGAGGCGCAGGC
AATGGCCCTGGTAGTTGAGGCTTGGTTGGAGGAGAAGGAGGGAAGGGGCG
TAGAAGGGGAAGACATGGGAGCGGTGGGTGAGTATGAGGAGAAAAAGGAA
AGTTTGTTTGCGGCGCTGGCGCGGGACAAGCAGACGGTCAAGACATTGGC
AGCGGTGATGGAGGAGAAGGAAGCAGAATCAACACTGTCACGACGACTTA
CGTCGACAATATCAGCACGATCAAAAGCGGCAATGAAAACATCGGCGGCG
GCAGGGAAGGAGGGTGTAGAGAGAATAGAAAACGAAAGGGAGGATGCTAT
AACCAGTGGTAGGGCGGAGGAGGAAGAGGAGGGGGTTGAAGTGGTTTTCA
CCGTAGAAGGTCAAGATTCCGAGTCCAAGGAGGAAGACGATGGGACAGAC
AAGAACCACAATGACAACAAAAGCAATTAGAAGAGCAGTAGCAGCATTAA
TACCACCACCACCACCACCTTCACCACCAACACCAACACCACCACCACCA
CCACCACCACCACCACAACAACAACAACAACAACAACAACAGTAGTAGTA
GATTCAAATAATGATCATGGAAAAGGAACGGTCCTGGATTGGACGTAAAT
GAATAGAAGCGAAAAATGAATTGAATAAAGCAAACTGATGAAATTTCCTT
GATAAATCGTTCGTCGTCCTCTTAACTTTAACTCAGGATTTCTCTTTTTT
CCCATCTTTCTTTGTCTCTCCTCATCTGTTCTGGGCAAGTCTCAATATCC
ATCAATCAAAAAATAGTGAGTCCAGAGCTCCTGTGACACTTTGCTTAGAT
ACAGGGCTGACACGTTACATAGACTTCGCTTTTCGTTTGAACATTGTAAT
TGGATAAGTAAATAACTCAAATCAGTCACCTAACAGGCACGTATAAGGAG
AAATGACAGTCACAACGACGTCCATTGGCTGCTCCTGATTTCGCTGCTGA
TTCTGCTACTGCTGTTGGTGATATTTTCTGGGCTCCCTCAGGGTTCGATG
TATCTTTTCCGTCCGCTTTCTATTTGAACACGTTTGACGTATTATATGTA
TACGAAGTTCTCGCTGCTGGCTTTCGCTGCTACTGCTGCTTGCACTGCCA
TTGACACGGCTTCTCACGGACGAACTGTTCAGTTTTTCTCCTATCCCTCT
TTGTCGAGATATCTCTGTAGGTACTTTGCACTGGACTCTCACTTTTCAAT
TATTCCACAGTTATTCTTCCCTCCTCTTTCGTCTGCCATTCCTTGTTTGC
AATCCTCCCTCCCTTTCTCTTTTTCATGTTCTTCATTTTTATTTTTTTCA
TTCTTTCTGATCTTGTTTTATGCACGCAAAAATCGCTTTCCCTCCCTCTC
CCGTTTACGGCGACGACGAGCTTGCTCCGGTGTCTCATGCGGCTGCTCGG
CAACAGTGTCCTGTTCCATGATCGGCTGCTGTACGTTAGGCAGTGTGTCT
GGTTGCTTTGTCATAGGCTCTACCTGCTGGCTCAACACGCCAACATGCTC
CTGGCCCTGCATCTTAGGCTGTACTCTAACCTGCGCATCCCCAGAACTCG
TCAAGATTTCTTGGCCAGCGGCTGCCTGCTGCTGCTGCTGCTTGAGGGTC
TCGGCGGCAGTGGTTGCCTCGTACTTATCGTCGAATTGCTTAATTACGGT
CTGACCTACCTGCTTGCCAAGTGCTATGGAAGGTGAAGTAGTGTGCCGCC
AGTGGCCACCCGAATACACGCGCGACACTGCGCAATCGTCCGCAATCTGG
GACATGGAGTGGTACGTACGTCGCTGGCCATCAGGCGCTGTCAGGACCAA
AGGGAAAGGCGCTTCGTCCTTACCGCTGTTCGCAACCTCTGCCAAAACCT
CAGCCATGGCCCCCCCCAAGCTGGCATGGCCGTTCGGGTACTCGGGTGTC
GCGGGCGTGACCCGAAAAGGTTCCCAGTTGCTCGATGCCTCCATGTCTTG
TCCTTCATTCCCAGTGCGAATGGCCGTGATGGGGCGCCAGGTATTGTAAA
AGTACGTGTTATCAAAGGCAGCTACGCGCGTGTCCATAGCCGCCACGCTT
GCCATGGCGTAGGCACGTGCGGCCTCGGGAATGCTCAGCGTGACGCGGCC
ATCTGGGGTAAGCTTCACTAGATCATTAAGGCTATCATTTGCTTTCCAGG
CATCTCCATTCGCCTTCTGATTTTGCCAGTCATTCTCTTTCTGCTGGGTC
TGCTGCTGCTGATTCCAGTCATTGTTGTTCCACTGCTGCTGCTG

protein sequence of NO11G03570.1

>NO11G03570.1-protein ID=NO11G03570.1-protein|Name=NO11G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MESPTSPPPAPSLRPPSRRRQRAAPLSSFLLRHASILLFLLVAVHGNLLT
PISLGIDLGNHKSVVALAQGHGIDVHVNAMSRRETPSAVLFRGRRRLFGD
LALAGAGAAPKSVVTHLRRLLGAALRIKDDDEMAREEGEEEGVEEEQDEE
EDKCVFEPFGAGLLGKGGEDDPCRVGPQIKVRHVGRDIELSAAQVVAMLL
SHLRKEVEAAHGDSNVLNTVISVPAWFGRAQRALVVDAARVARCPSPAVV
TDGTALALGYGLLNMKAGEPAKVIVFVDIGHAGTQVTVAKVSGEECKVLA
HAWDRRVGCDSMDRALYRLLRSRQPLSLREGAKEGGKEGKVTGAGEHEHQ
EKTEGLFGRGKEERSSSSTLSPRARARLLAGCVKLKKTLSANVEAFLTLE
CLLEGGEDVSFKISRQEAEEAWAPLVARLRKLCRMAMRRAEDGERKGGRE
GEGGVGKLTIDAVELVGGGSHIPCLPTAIEAEMRAWSSSSSSPTSQANPS
SLPPHPPLRRTLNAAEAVARGCALAAALHSEAFRISRPYVVMDALPRTME
VRSGKGRLLLPRLERGSAYALYPKGGWEGGVEIDGEEDEEEGGVEGGGGI
EVRVEEEGSGLVAARGFSRLFSKLLAPEMEEEAGGEG*

Synonyms

Publications