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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr11 | genome | chr11:1001630..1004331 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0017056 | structural constituent of nuclear pore |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006913 | nucleocytoplasmic transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005643 | nuclear pore |
Homology
BLAST of NO11G03210 vs. NCBI_GenBank
Match: EWM24880.1 (hypothetical protein Naga_100265g6 [Nannochloropsis gaditana]) HSP 1 Score: 159.8 bits (403), Expect = 3.700e-35 Identity = 90/201 (44.78%), Postives = 113/201 (56.22%), Query Frame = 0
Query: 666 SVVGLGGSTAGDPAAFEREFGTTKLSDLIKMFQAGVEDDLEVCEIQNQGVREDDENLLQVLGLAQAFHGSVNELTEAWGDIDGGLRYIEGKQAAMDMALEELENATVTKMDRGDIVLNEADTERIALYDLVEGMDEELNGLLRRVSGTAESLQDIYEQRVVPANKANAMGLFLRLANDHQQALEWLQRTGRRVEEGVVIVE 867
+V GLG S A DPA FEREFG KLS+LIK+FQ GVEDDLEVCE+QN+ VRE DE + + ++ GD+ L+ AD ER+ LYDL++GMD ELN LLRRV+ A + IYE+ + P + N MG+FLRL NDHQ ALEWLQRT R+VE+ + E
Sbjct: 296 TVWGLGKSVATDPAVFEREFGAYKLSELIKLFQGGVEDDLEVCEVQNEAVREGDERTATAQEVTRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLE-GDVALDGADLERMDLYDLLQGMDAELNMLLRRVTREAGRVGGIYERHISPPDAENPMGIFLRLTNDHQHALEWLQRTARQVEDAAMQCE 495
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03210 ID=NO11G03210|Name=NO11G03210|organism=Nannochloropsis oceanica|type=gene|length=2702bp
ACAGGAGGCTGTCCTGCATACACGAGACGGAGGTAGCAAATAATGTCATT
CTCTTTTGGTGGCGCGGGCGCTGGTGGACCTGGCAAGAACCCCCCTTCAA
GCTTTGGCTTCGGGCAAGCGGCCGCTCCCCCTGCTTCGTCCGCCTTTGGC
ACCCCGGGCGGGGCCACGACTACCCCTGGAGGCGGCTTTGGGGGTTTCGC
AACGCCACCCTCTTTTGGTGGCGGCAGCGGCAGCGGCACAACACCAGCGA
CCTCGACGGGTGGTGGCCTTTTTGGCGGCACCAGCAGCAGCGGCGCAAGC
TTTGGTACCCCTGCACCCTCTGCCTTTGGAGCTCCTGCGCCCTCTGGGTT
TGGGGCGCCTGCTACAACAAGTGCAACAACCGGTATGCCTAGCAACCCAT
TCGCGGTCACACCCGCTCCGTCCACCACCACGGGGGGAGGGTTAGCGACC
CCAAGTCCATTCGGGACTCCCGCAGCTCCTGCGCCCGCACCGAGCGGGGG
TGACTTTCGCTTCGGCGCAGCGACCACGGCAGGTACACCGGCGATAACAA
CCCCATCTGCAAGTGGGTTTGGGTTCGGAGCTAAGCCGGCCGCCCCGGTG
GCTCCAGCCGCAGGAGGCGTTGGCTTTGGGGGTGCGTCGACCGCTGCTCC
TGCGTATGGTGCGCCTGTCCCTGTTACCACCACGACAACGACGACCCCGA
GCACATCAGCTGCTGGTGTCTTCAGCGGGTTCAGCTCGACGGCATCAACC
CCTTCTGCATTGTCCAGCACCTTGCATAGCGCGACGGAGAAAGCCCCCGT
GTCTCTTTTTGGTGCGGCGCCTAGTAGTGGAGGCCTCTTCGGTAGTAGTT
CTGCAGCCACCGCACCCGCTGCTCCCGCACCATCCACCTTATTTGGAGCA
CCATCAACACCAGTAACAACAGCATCAGCACCAGCACCAGCTCCTGCGCT
CACTTCTGCTTCCCTGTTTGGTGGGAGCACCGGACCAACTGCAACGACGA
CGACCACCAAAACCCCTCAAGTCCCGCCAGCGTTCCCCTCCTTTGCTTCT
ACCTCGACATCCACATCCAACGTATCCGCACCTGCACCCGCGCCTGCATC
TGGGTTTGGCTTTGGTACTGCCCCTCCAGCCTCTGCCCCTGCTCTTGCTC
CTGCTTCTTTTGCTTCGCCCTTTGGCACCGGCAGTGCGACGACAACTACC
ACTCCAGCAGCAGCAACAGCAGTATCAGCAGCTCCAGTGGCTGCTCCTTT
TGGAGGATTCAGCTTTGGTGGTGCTGCCACTCAAGCGCCAACGAGTGCAA
GTGGAGCAACCAAGGAAGGAGGAGCAGGAGCAGCACCCTCCTCTAACGAT
GCTACCGCCACTATCTCAGCACCAGCACCAACACGAGGGTCGTCTTCTGG
CTTCTCCTTTGGAAATGGTGCTCCTCCCGCTCCTACTCCTGTAACTACTA
CTTCAGCACCAGCACCAACACCAGCGTCGTCTTCTGGCTTCTTCTTTGGA
AACGGTGCTCCTCCCACTCCTGCTCCTGTAGCTACAGCTGCTCCTCCTTC
TGCACCTGCTCCGGCCACCACCACAATGTCTACTGCAGCCCCCACCGCTT
TTTCCTTCGCTACACCCGCGACAAAACCTGCTGCTCCAACTGCTGCTTCT
ACTGCTGCCACGACCGCTGCTCCTGCGTCTGCCACCCCATCCTCCCTACC
AACCTTGTCTTCTGCCGCGCCAGCCGCCATCCCCCCTACAACAGCAGCAG
GAGCACCGGCATCAGCACCAGCACCAGGCCCCGCTCCTGCTCCTGCTCCT
GCTCCTGCTCCTGCATCAACCTCAACAGTCGCAGCCACACCGGTATCTGC
GCCCTTTAGCTTCGACAGTAGTAGCAGCGGTGGTAGTAGTGGTGGGGGGG
TCTCCACAGCTGCTGCTGATACTGCTAAAGCTACGGCTGCCCCTACAGCA
GCATCTGCTCTCGCCACAACTACTACTACTACTGCCACTACGGGCAGTGC
TGCTGTCACTGCTGCAACTGCTGCAGATTCCGAGTCGTCGGTTGTTGGTT
TGGGTGGAAGCACAGCCGGCGACCCTGCAGCATTCGAAAGAGAGTTCGGC
ACAACAAAATTGAGTGATTTGATAAAAATGTTTCAAGCAGGGGTCGAGGA
TGACCTAGAAGTGTGTGAGATTCAAAACCAAGGTGTGAGGGAGGACGATG
AGAACCTCTTGCAGGTGTTAGGGCTAGCGCAAGCATTTCATGGGTCTGTG
AATGAGTTGACGGAGGCCTGGGGGGACATCGACGGAGGGTTGAGGTATAT
TGAAGGGAAGCAGGCCGCGATGGATATGGCGCTGGAGGAGTTAGAGAACG
CAACGGTGACAAAGATGGATAGGGGAGATATAGTGCTCAATGAGGCAGAT
ACGGAGCGGATCGCCCTCTATGATTTGGTTGAAGGGATGGATGAGGAGCT
GAATGGTCTGTTGAGACGGGTGTCAGGGACAGCGGAGAGCTTGCAGGACA
TTTATGAGCAGCGTGTCGTGCCTGCAAACAAAGCTAATGCCATGGGCTTG
TTCTTGCGACTGGCCAACGATCACCAACAGGCTTTGGAATGGTTGCAGCG
GACGGGGCGGAGGGTAGAGGAGGGGGTTGTTATAGTAGAGGGGAAGCTGA
GGTGAGGTGAGGAGGAATTAATTTTTATGTAAGGCAGATAGGCAATCTTG
TG back to topprotein sequence of NO11G03210.1 >NO11G03210.1-protein ID=NO11G03210.1-protein|Name=NO11G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=871bp
MSFSFGGAGAGGPGKNPPSSFGFGQAAAPPASSAFGTPGGATTTPGGGFG
GFATPPSFGGGSGSGTTPATSTGGGLFGGTSSSGASFGTPAPSAFGAPAP
SGFGAPATTSATTGMPSNPFAVTPAPSTTTGGGLATPSPFGTPAAPAPAP
SGGDFRFGAATTAGTPAITTPSASGFGFGAKPAAPVAPAAGGVGFGGAST
AAPAYGAPVPVTTTTTTTPSTSAAGVFSGFSSTASTPSALSSTLHSATEK
APVSLFGAAPSSGGLFGSSSAATAPAAPAPSTLFGAPSTPVTTASAPAPA
PALTSASLFGGSTGPTATTTTTKTPQVPPAFPSFASTSTSTSNVSAPAPA
PASGFGFGTAPPASAPALAPASFASPFGTGSATTTTTPAAATAVSAAPVA
APFGGFSFGGAATQAPTSASGATKEGGAGAAPSSNDATATISAPAPTRGS
SSGFSFGNGAPPAPTPVTTTSAPAPTPASSSGFFFGNGAPPTPAPVATAA
PPSAPAPATTTMSTAAPTAFSFATPATKPAAPTAASTAATTAAPASATPS
SLPTLSSAAPAAIPPTTAAGAPASAPAPGPAPAPAPAPAPASTSTVAATP
VSAPFSFDSSSSGGSSGGGVSTAAADTAKATAAPTAASALATTTTTTATT
GSAAVTAATAADSESSVVGLGGSTAGDPAAFEREFGTTKLSDLIKMFQAG
VEDDLEVCEIQNQGVREDDENLLQVLGLAQAFHGSVNELTEAWGDIDGGL
RYIEGKQAAMDMALEELENATVTKMDRGDIVLNEADTERIALYDLVEGMD
EELNGLLRRVSGTAESLQDIYEQRVVPANKANAMGLFLRLANDHQQALEW
LQRTGRRVEEGVVIVEGKLR* back to top
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