NO11G02300, NO11G02300 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G02300
Unique Name	NO11G02300
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3598
Alignment location	chr11:739908..743505 +

Link to JBrowse

Properties


Property Name	Value
Description	Intraflagellar transport protein 88

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:739908..743505 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Vocabulary: **Cellular Component**
Term	Definition
GO:0031514	motile cilium

Homology

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: EWM24989.1 (intraflagellar transport protein 88 [Nannochloropsis gaditana] >EWM24990.1 intraflagellar transport protein 88 [Nannochloropsis gaditana])

HSP 1 Score: 434.1 bits (1115), Expect = 1.100e-117
Identity = 304/573 (53.05%), Postives = 363/573 (63.35%), Query Frame = 0

Query:   55 IATRPMTAVSGAGYG-------SRRAVTSSTPGGEAHASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXI---LAQSTA--------SAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------------AGKLIAPVVDGGAG---------------------MMGFERALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLE 573
            +AT P+TAVSGAGYG       +      S P   A  S   + LP+P   S+G+SKPST  LV  QD+ PE++    E QVHALLEASA A+R GQL  AL+KAKEAQ+KERAL R RE +NL D +NGELTYAVALHLGS+YE +GM DEAL VY+GL++QRA LPP AGW RLNMGN++YR+ RY++AVKMYRM LDQIPS++HKA RLKVYRN+G+A  RL +W EAVQA E++VLNP TH  G                               L++S A        SA FS+S  G  SP  VVFGDYFRTAY LL+CYL LG+  KMKRAF KMVST+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXX                        +                AGKL+APVV+   G                     +M  ERA A +R+K+FD AVE+L++FE+K+  +KA AAS+LSF+YFLEGEL+ AEE A +A++ N YNA+ALVNKANCVFQRGD G AK+LYLEALGVEA CLE
Sbjct:   59 VATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLG--SPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMELWEAAXXXRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: XP_009037293.1 (hypothetical protein AURANDRAFT_10223, partial [Aureococcus anophagefferens] >EGB07919.1 hypothetical protein AURANDRAFT_10223, partial [Aureococcus anophagefferens])

HSP 1 Score: 334.7 bits (857), Expect = 8.700e-88
Identity = 219/577 (37.95%), Postives = 301/577 (52.17%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSSTPGGEAHASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRM-ALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGD-YFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFERALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL 633
            RPMT+ SGAG+ +++       GG A     P           G  +     L ++ DNSPE     FE+QVHAL+EASA AA +G    AL+KAK+A ++ERAL ++RE + L D +N +LTYAV  +L   Y  + M DEAL  Y  L+K +    P +G +R+NMGNI+Y Q +Y  A+KMYRM ALDQIP +T K  R K++RN+G+A  RLGQ+ +AVQ+YE                                                              ++ GD  F T ++L+LCY ALG  EKM+R F K++S                                                                              + P  +  A  M  ERAL ++R+K FD A+E LKAFEKKD+ +KA+AA+NLSFIYFLEG+L  AE YA++A +Q+RYNA ALVNK NC+  + +   AK+ YLEA+GVEADC+EAI+NLGL NL+++L SEA  A+EKLH ++P+  EVIYQ+  + EA+GQL  A+KW+ +L+
Sbjct:    6 RPMTSTSGAGFSTKQ-------GGAAARGFDP----------LGQGRGPAPPLAERADNSPEDQAREFEKQVHALVEASAAAALEGNHDAALEKAKDAGKRERALCKHREAHGLVDQINIDLTYAVCFNLAHAYHSARMHDEALHTYSLLVKNKQY--PQSGRLRVNMGNIYYEQQKYQTAIKMYRMAALDQIP-NTGKHIRFKIFRNIGNAFVRLGQFGDAVQSYE-------------------------------------------------------------TIMGGDPDFHTGFNLILCYYALGDAEKMRRGFQKLISIPLASGGDAKDDAKATATRDLARADGLRHELKRREKEAHGYMLTAARLIAPELKAPDDAMVGYRLII---------DALKPDHELLASEMEIERALKYMRNKDFDKAIEALKAFEKKDQHLKAMAATNLSFIYFLEGDLRAAERYADLAYEQDRYNARALVNKGNCLTVKHEHETAKQFYLEAIGVEADCVEAIYNLGLVNLKMELWSEALQAFEKLHQIVPNNAEVIYQISALHEARGQLDIALKWYNILI 492

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: XP_002902625.1 (Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4] >EEY56551.1 Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4])

HSP 1 Score: 304.3 bits (778), Expect = 1.300e-78
Identity = 236/825 (28.61%), Postives = 349/825 (42.30%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q ++  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++T                                                                         A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQHEEALHSAKDAGRKERAFNKHCELNGLADLLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQFPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGAAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLITT---------------PMEGMSEEDEDESGLANESKHDDDAHTSSKDHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTTQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDVMGNYRQAAKWFNILLSCFGSNDKRERNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMLLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: XP_009524291.1 (hypothetical protein PHYSODRAFT_495507 [Phytophthora sojae] >EGZ21574.1 hypothetical protein PHYSODRAFT_495507 [Phytophthora sojae])

HSP 1 Score: 302.8 bits (774), Expect = 3.700e-78
Identity = 235/825 (28.48%), Postives = 347/825 (42.06%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAHASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLLL---GLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S     S      P GEA  S A  A                  LV+K +NSP+ +    ER V++L+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E V+       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL    G +++ R +                                                                                   VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTASGQRMFDPMGEARKSGAAPA------------------LVEKTENSPKEVAKELERTVNSLIEQSAELISKEQYEEALHLAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGAAQIKLGHYQDAAATFEDVM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSDEDEEESGLANESKHSDDDHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMSVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGGSDKRDRNAK----------------------------------------------------------------------------NVADPGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: ETI47325.1 (hypothetical protein F443_08467 [Phytophthora parasitica P1569] >ETM47029.1 hypothetical protein L914_08187 [Phytophthora parasitica])

HSP 1 Score: 302.4 bits (773), Expect = 4.800e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

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BLAST of NO11G02300 vs. NCBI_GenBank
Match: ETK87224.1 (hypothetical protein L915_08299 [Phytophthora parasitica] >ETL40648.1 hypothetical protein L916_08224 [Phytophthora parasitica] >ETP17100.1 hypothetical protein F441_08446 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 302.4 bits (773), Expect = 4.800e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

[Close]

BLAST of NO11G02300 vs. NCBI_GenBank
Match: ETL93796.1 (hypothetical protein L917_08122 [Phytophthora parasitica])

HSP 1 Score: 302.4 bits (773), Expect = 4.800e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLTNESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

[Close]

BLAST of NO11G02300 vs. NCBI_GenBank
Match: XP_008905262.1 (hypothetical protein PPTG_11826 [Phytophthora parasitica INRA-310] >ETN09429.1 hypothetical protein PPTG_11826 [Phytophthora parasitica INRA-310])

HSP 1 Score: 302.4 bits (773), Expect = 4.800e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQESHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

[Close]

BLAST of NO11G02300 vs. NCBI_GenBank
Match: ETP45128.1 (hypothetical protein F442_08404 [Phytophthora parasitica P10297])

HSP 1 Score: 302.4 bits (773), Expect = 4.800e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYHLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQEKHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

[Close]

BLAST of NO11G02300 vs. NCBI_GenBank
Match: KUF64658.1 (Intraflagellar Transport Protein 88 [Phytophthora nicotianae])

HSP 1 Score: 302.0 bits (772), Expect = 6.300e-78
Identity = 236/825 (28.61%), Postives = 348/825 (42.18%), Query Frame = 0

Query:   58 RPMTAVSGAGYGSRRAVTSS----TPGGEAH-ASAAPSALPNPTPGSSGSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALDKAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEALQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIPSSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXILAQSTASAFFSSSSFGLTSPHVVVFGDYFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGKLIAPVVDGGAGMMGFE---------------------RALAFLRDKQFDAAVEVLKAFEKKDEKMKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQRGDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTLIPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLL--LGLNRKGRGSSINSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARLGKLYQEEGDDAQALHYFQESDRVNPHNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPEDTDCLNALVVLCQDLGRPWEGYQQRLMRLQ 855
            RPMT+VSGAG+ S            P GE+  A AAP+                   LV+K +NSP+ +    ER V+AL+E SA    K Q   AL  AK+A RKERA  ++ ELN LAD +N +LTYAV  +L + Y  +G+  EA+Q Y  ++K +       G +R+NMGNI++ Q +Y  A++MYRMALDQIP +T K  R K+ RN+G A  +LG + +A   +E ++       EG                                                        F++ ++L++CY A+G+ EKM+R F  +++                                                                          A KL AP +D    + GF                      +A  FL++K+FD A+EVLKAFEKKD   KA+AA+NLS++YF+EG+   A++YA +A++  RYNA ALVNK NC++ + +  +AKEL+LEA+GVEADC+EAI+NLGL N+++ +L+EA  A+EKLH+++P   EV+YQ+  + +  G   QA KWF +LL   G N K   ++ N                                                                                VLARLG+++ ++ D+ QA HY  ES R  P NL+                                                              +PE+ +CL  LV +C+DLG+  +G+Q +L +L+
Sbjct:   93 RPMTSVSGAGFSSNPRTAGGQRMFDPMGESRKAGAAPA-------------------LVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFFNLANAYXLNGLWKEAIQSYTPIVKNKQY--AQGGRLRVNMGNIYFEQQQYPTAIRMYRMALDQIP-NTSKEVRYKIKRNIGGAQIKLGHYQDAAATFEDIM-------EGNAD-----------------------------------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLIT---------------IPMEGMSEEDEDESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQAAKWFNILLSCFGSNDKRDRNTKNVAD---------------------------------------------------------------------------PGVLARLGQIFNKDDDETQAFHYHLESYRYFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYLVAICKDLGQRCDGFQAKLAKLE 745

The following BLAST results are available for this feature:

BLAST of NO11G02300 vs. NCBI_GenBank

BLAST of NO11G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24989.1	1.100e-117	53.05	intraflagellar transport protein 88 [Nannochlorops...	[more]
XP_009037293.1	8.700e-88	37.95	hypothetical protein AURANDRAFT_10223, partial [Au...	[more]
XP_002902625.1	1.300e-78	28.61	Intraflagellar Transport Protein 88 [Phytophthora ...	[more]
XP_009524291.1	3.700e-78	28.48	hypothetical protein PHYSODRAFT_495507 [Phytophtho...	[more]
ETI47325.1	4.800e-78	28.61	hypothetical protein F443_08467 [Phytophthora para...	[more]
ETK87224.1	4.800e-78	28.61	hypothetical protein L915_08299 [Phytophthora para...	[more]
ETL93796.1	4.800e-78	28.61	hypothetical protein L917_08122 [Phytophthora para...	[more]
XP_008905262.1	4.800e-78	28.61	hypothetical protein PPTG_11826 [Phytophthora para...	[more]
ETP45128.1	4.800e-78	28.61	hypothetical protein F442_08404 [Phytophthora para...	[more]
KUF64658.1	6.300e-78	28.61	Intraflagellar Transport Protein 88 [Phytophthora ...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL115	nonsL115	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR010	ncniR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002024	NSK002024	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G02300.1	NO11G02300.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|528883	gene_5125	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100122g6	gene5513	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G02300.1	NO11G02300.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G02300 ID=NO11G02300|Name=NO11G02300|organism=Nannochloropsis oceanica|type=gene|length=3598bp
ATGTCGGATGCGGACTACGACTTTGTGTCGGCAGTGCGTCGTCGACCAAA
GCCGCCGCCGCTGCCCCGCCCCCTGCGTCACCCACCTCCCCCTCCTCCCA
CAAGAAGCCATTTTTCCTCCACCAGTAGCAGTGCCACGAGTACGACCGGT
GGAAGCACGGACATTGCCACACGTCCCATGACGGCCGTATCAGGAGCTGG
CTACGGAAGTCGGCGCGCGGTCACTTCTTCTACCCCTGGCGGGGAGGCTC
ACGCGTCTGCTGCCCCTTCGGCCCTACCCAACCCCACACCGGGCAGCAGC
GGCAGCAGCAAGCCGTCTACTGCAATATTGGTTGACAAGCAGGACAATAG
CCCTGAGTCGTTGGTGCTGGGGTTCGAGCGACAAGTGCACGCTTTACTGG
AGGCGTCCGCCCTGGCTGCAAGAAAGGGACAATTGGCACGAGCACTCGAC
AAGGCCAAGGAAGCTCAACGAAAGGAACGCGCCCTGGTCCGTTATCGCGA
GCTCAATAATCTAGCGGATACAGTCAACGGCGAATTGACTTACGCCGTGG
CGTTACATTTGGGAAGTGTGTACGAACGCAGCGGCATGGGCGACGAAGCT
TTGCAGgtacttacctcacatctgctcctctcaacgctcgatataacacc
tcaccctcgcccccttcttttttggacctcttttgaatgagacatggcaa
ttttaatgtcccgccatcgccgtcctctgacttatccgtcgcatgaagcg
aaccctcttttcctccttccctatttccctccttgtaggaccgccaaggc
ctgatcatgccacacgccatcctgccccccatgactgggaggaatcactt
taaaacgggcaaagttccttatcttaacccctcctccaccccccccttac
cttcctccctccttccgctagGTCTACCAAGGCCTGATCAAACAACGCGC
GGCCTTGCCTCCCACCGCTGGGTGGGTTCGTCTGAACATGGGCAACATTC
ACTACCGCCAGGCCCGCTACTCCCAGGCCGTAAAAATGTATCGTATGGCG
TTGGACCAAATCCCATCCAGCACACACAAGGCGACCCGATTGAAGGTTTA
CCGGAACCTGGGGCATGCTTTGGCGCGGCTTGGGCAGTGGCCTGAGGCCG
TGCAGGCCTATGAGATGGTGGTGCTCAATCCGACCACGCATCCCGAAGGG
GGGGGTGGAGGAGAAGGAGGGCGGGATGGAGGAGAGGAGGGCGGGAGTGG
AGGGAGCAGTAATGGGAGTAGGGGGGGCAATATCCTGGCTCAGTCGACGG
CATCGGCCTTTTTTAGCTCGTCTTCATTTGGCTTGACCTCGCCCCATGTG
GTGGTGTTCGGGGATTATTTCCGAACCGCCTACCACCTCTTGTTGTGTTA
TTTGGCCCTGGGCCAGACGGAAAAAATGAAGAGGGCGTTCGTCAAGATGG
TGTCAACGGTGGCAGCACCTCCGGGGGAGCAGGACGAGGAAGAAGAGGGG
GAGGACGACAGAGAGGGAGAGGTGGATGAAGAGAGGGAGGTGAGGAAAGC
AGCGATGGGGGGGAGGGAGGAAGGACTAAGTGTAGATACGACAGAAGAAA
GGAAGGAAGAACGACCGGATTTTTTGAGGGAGGAAATGCGGAGACGACGG
AAGGAGGCAGCTCATTACTTGTTGCAGGCCGGGAAGTTGATTGCGCCGGT
GGTGGATGGGGGGGCTGGAATGATGGGTTTCGgtgggtggtggaggcctt
gagaaggggcaatcatgacgacgtctcgtgtcaagtggaattagAGAGGG
CGCTGGCGTTCCTGAGGGACAAACAGTTCGACGCGGCGGTGGAGGTATTG
AAAGCGTTTGAGAAGAAGGACGAGAAAATGAAGGCCCTGGCGGCGAGTAA
TTTGTCGTTTATTTATTTTTTAGAAGGGGAGCTGGACTTGGCGGAGGAGT
ATGCGGAGATGGCGATTAAACAGAACAGgtcgggagagaggaagggaggg
agggaaagacgaaaaagtgtcacgcttccagcgctgtttcgttcctggtg
acggtggtaatacgataccctcaccccttcttctttcccctcccttcctc
gctcattccttcctcctcagGTATAACGCCGCCGCGCTAGTGAACAAAGC
CAATTGTGTGTTCCAGCGGGGAGATCCGGGGAAGGCCAAGGAGCTCTATC
TCGAGGCTTTGGGTGTGGAGGCCGATTGCTTGGAAGgtaaatccatgtgc
tccttcctccccttgatcctcttctattgttccatttgtcaaagccactc
ttcagactcctccttgccctccatttcttcctttccccctccctctggcg
ggcattgccgacgttcatctcagtatattgcttcatgctcaacaagtgta
cgagaaacaacacatacatgtcaaaatccggattaccctgagatccttga
ccacccactaattcctccctctctccctccctccctccctattgcagCAA
TATTCAATCTGGGCCTAGCCAACCTGCGCTTGGACCTCCTCTCTGAGGCT
CAAAACGCCTACGAAAAACTCCACACGCTCATTCCTCATTGCCCGGAGGT
CATTTACCAGCTGGGGTATGTAGCCGAAGCACAAGGACAGCTCCCCCAGG
CCATCAAATGGTTTCAGGTCTTGCTGTTAGGGTTGAATAGGAAGGGGAGG
GGCAGCAGCATAAATAGCACCAGCAGCAACAGGAAGGGCGATAGGAGCAG
CGTCCGAAAGGGAGGGGGCGGAGGAGAGGGAGAAGGGGAACGACGAATGT
CCTCATCAAGTGCATCGTCTTCGTTGGCATCGCCCCCCACGACTGTCGGT
ACAAACGAATATGGAAATGCTCTTGCAGTAACAGGTACTACTGCTTCCAC
TGCTGCCTCTGATGCTGCTGCTGCCGCTGCTGCTGCCGTGACTGTGGACG
AGGAGGTGCTTGCGCGGTTGGGGAAGCTGTACCAGGAGGAAGGCGACGAC
GCGCAGGCGTTGCATTATTTTCAGGAGAGCGACCGCGTGAATCCGCACAA
TTTGGAGGTTATATCGTGGTTGGGGCTGTGGCATACACGGCAGGAGCAGg
tacgacatacaggtggcatcttttgaattaccccatccgccctcccctcc
ctcctatggtactcgatcctcatcctccctccctccctgccttcctcgtt
ccccacagTACACATCTGCCCTCCCCTATTTCCGACGCGCTGCTGCCTTG
CAGCCATTTTCCTCCCAATGGCCTTTAATGCAGGCAAGCTGCCATCGTCG
CCTCGGGGACTTTTCCCGCGCCCTCGGAATTTATCAGCGTGTGCATGCGT
CTCACCCTGAGGATACCGATTGCTTGAATGCTCTAGTGGTATTATGTCAG
GATTTAGGCAGGCCCTGGGAAGGGTACCAGCAGCGATTAATGAGATTGCA
GGAGCGAGGGAGAGGAACAGGGAGGGGAAGTGCGGAGGGCGCTGCCGGTG
TAGGAAGCGAGGGGAGGGGAGTTGAGGTGGGGGGAAGGCCGAGGAAGAAG
AAGGGGGTGGGGGTTGAGGATGTGGACGTGGGGAGCTTGCTCATATAA

protein sequence of NO11G02300.1

>NO11G02300.1-protein ID=NO11G02300.1-protein|Name=NO11G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=903bp
MSDADYDFVSAVRRRPKPPPLPRPLRHPPPPPPTRSHFSSTSSSATSTTG
GSTDIATRPMTAVSGAGYGSRRAVTSSTPGGEAHASAAPSALPNPTPGSS
GSSKPSTAILVDKQDNSPESLVLGFERQVHALLEASALAARKGQLARALD
KAKEAQRKERALVRYRELNNLADTVNGELTYAVALHLGSVYERSGMGDEA
LQVYQGLIKQRAALPPTAGWVRLNMGNIHYRQARYSQAVKMYRMALDQIP
SSTHKATRLKVYRNLGHALARLGQWPEAVQAYEMVVLNPTTHPEGGGGGE
GGRDGGEEGGSGGSSNGSRGGNILAQSTASAFFSSSSFGLTSPHVVVFGD
YFRTAYHLLLCYLALGQTEKMKRAFVKMVSTVAAPPGEQDEEEEGEDDRE
GEVDEEREVRKAAMGGREEGLSVDTTEERKEERPDFLREEMRRRRKEAAH
YLLQAGKLIAPVVDGGAGMMGFERALAFLRDKQFDAAVEVLKAFEKKDEK
MKALAASNLSFIYFLEGELDLAEEYAEMAIKQNRYNAAALVNKANCVFQR
GDPGKAKELYLEALGVEADCLEAIFNLGLANLRLDLLSEAQNAYEKLHTL
IPHCPEVIYQLGYVAEAQGQLPQAIKWFQVLLLGLNRKGRGSSINSTSSN
RKGDRSSVRKGGGGGEGEGERRMSSSSASSSLASPPTTVGTNEYGNALAV
TGTTASTAASDAAAAAAAAVTVDEEVLARLGKLYQEEGDDAQALHYFQES
DRVNPHNLEVISWLGLWHTRQEQYTSALPYFRRAAALQPFSSQWPLMQAS
CHRRLGDFSRALGIYQRVHASHPEDTDCLNALVVLCQDLGRPWEGYQQRL
MRLQERGRGTGRGSAEGAAGVGSEGRGVEVGGRPRKKKGVGVEDVDVGSL
LI*

Synonyms

Publications