NO11G01320, NO11G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01320 vs. NCBI_GenBank
Match: EWM25090.1 (rna polymerase i-specific transcription initiation factor rrn3 [Nannochloropsis gaditana]) HSP 1 Score: 494.2 bits (1271), Expect = 9.900e-136 Identity = 325/683 (47.58%), Postives = 378/683 (55.34%), Query Frame = 0 Query: 89 NTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQE--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPR--XXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTG----RHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHLHAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 N RS DDMETLP +FL+L++CITT+T +PD F +L SALF+YDWSGG +R A+ LLAHLVSAKSTF+HP LQMLARSLAAPGP+ T + LYP L AFPHRR G G VVNY RQLL ++ +T+ G L D++L LI+ERCLE+DVEIKIEDSGE V++ AE+ VH AHDPSAALVLSEH+YVEDP + + ED XXXXXXXXX LD VMLLLF+HLD+ + +G A++LFEGL P L+G ILATHRCKYVQF FYLAARD +GRVP LLVDRLL RA+ E++AP+ R AALAYLSSFLVRSRAL V IVRALT ++E AE +LAR A+DL + G R V FYS+CQA+FYVV FHHS+ +GED+LGV AA +V LG LK RLGRLACSPLRPLDHCLESVKREFLRLA LH VP GAL GLG G V NHNPL+SYFPFDP+LLRRSS FVA P+VYRYW Sbjct: 34 NHNRSLDDMETLPHVFLALSTCITTITANPDAFKELFSALFQYDWSGGCRARDAYSCLLAHLVSAKSTFVHPVLQMLARSLAAPGPLQDDTAKNGNRMAAEGSGNVQGLIDLGDTNNARKAAVHESLRTVLALVPAGFSELYPVLGQAFPHRRTMGPGGVVNYVRQLLVLATEYATV----------------------TEPAKGTSSGSTPSVQSKQRGSGTALGDKLLALILERCLELDVEIKIEDSGEVSVDQADNAAEA------GVHAAHDPSAALVLSEHMYVEDPTYCL------DIHHPMPGPEVVGEDGAGGXXXXXXXXXVDEMADTLDSVMLLLFQHLDKAISCDG-----QAASRLFEGLGPVLDGSILATHRCKYVQFAFFYLAARDLSGRVPVLLVDRLLARAVEEDDAPMVTRLAALAYLSSFLVRSRALPVEEIVRALTALLETAEAFLARRAADLMVYMDHAWLKEEDPGSWEAGVVKKEERWLGEEEAPYGGKGPTEEDADGQADDRPVFFYSLCQAIFYVVAFHHSSSEGEDVLGV------RAAETGAVR------LGG----------QLKSRLGRLACSPLRPLDHCLESVKREFLRLARLHGLVPWGALGGLGGGEEEEELV---TEGNHNPLNSYFPFDPFLLRRSSGFVARPNVYRYW 652
BLAST of NO11G01320 vs. NCBI_GenBank
Match: CBJ29597.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 140.2 bits (352), Expect = 3.600e-29 Identity = 226/781 (28.94%), Postives = 312/781 (39.95%), Query Frame = 0 Query: 75 MKLRGNGTNYVHIVNTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPL-RDRVLGLIIERCLEIDVEIKIEDSGEARVEEKK--------------AVAESEPTAAIAVHLAHDPSAALVLSEHVYVED---PNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNI------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRL--AHLHAFVPAGALVGLGWGGXXXXXVQAT------------------------------------RRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 MK +G+G +Y H+V + +RDD ETL RL+L L+ C+T ++ PD+F +L+ ALF++DW G +F LL HLVSA ST + P + ML R+L + P+ + L+ L +PHRR+ + +YA LRV +Y APL + VL LIIE+ LEIDVEIKI D+GEA +++++ A+ + V D ++L Y++ N + +A + K R G GG +G A+L + L E IL THR K+VQFVLF+ + R A + LV + LV L +E+ P RQ+++AYL+SFL R+ + + A+ +++ A YL + A D ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX H+LFYS+CQA FYV+ F G E AA + F S ++ Q RL PL PL CL++V+REF RL + A++ L L V T NPLDS+FPFDPYLLRRS ++ +Y W Sbjct: 1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLV----LTPRDLD------------CEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAE-VLSDYALHALRVVQY-------------------------------------------------APLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTLK------------GRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGR--ARGLGYALVSK-LVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYA-DASVATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADHMLFYSVCQATFYVMCFR--------------GDELAA-------------MEGFDSQAVIWQ--------RLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYI--DQMYNTW 662
BLAST of NO11G01320 vs. NCBI_GenBank
Match: PNW85726.1 (hypothetical protein CHLRE_03g207950v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 105.5 bits (262), Expect = 9.900e-19 Identity = 139/475 (29.26%), Postives = 186/475 (39.16%), Query Frame = 0 Query: 308 GAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEE-----------KKAVAESEPTAAIAVHLAHDP------SAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSESAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMR--LGRLACSPLRPLDHCLESVKREFLRLAHLHAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 GAP+R+ +L ++E L +DVEIK ED + E + + E E A + + P SA L + H D S XX XXXXXXXX KLD +M L FEHL + + GE QL++ L E IL THR K+ QF++FY +P+ PS L RLLV LR+ P R A AYL+SFL R+ L +V+ L + + Y T RH +FY+ QAV YV+ +H L G G G +A A GS LA+ + +R + ++ L+PL CL SV EF+ A V L+ ATR + PL+ +FPFDPYLLRRSSRF+ Y W Sbjct: 205 GAPIREALLTAVVEHLLSLDVEIKWEDIVDVPTGEXXXXXXXXXXXAEDIFELEGMLASELDINAGPEELAQRSAVLAMRRHGPTPD------SRGGWEGALPGSQXXXXXXXXXXXXXXXXXPVDEMANKLDSMMELAFEHLGKRIA--AGE-----LRQLWDTLLSAFERSILNTHRSKFTQFLIFYTCLSNPSHCSPSFL--RLLVSRLRDTRQPPITRAACSAYLASFLARAAFLPESLVVKTLQDLAAFCQDYCNNQG-------------VAAGTGPGPVSRAASTCGLPDTSPFAGLAHEDTASQTQRHQVFYATAQAVLYVLCYHMQPLVGSLHAG---GKTPSADGTAPAH-------GSTERRQLAETVVALVRGPVWQVLNHRLQPLGVCLPSVAAEFVHQATSLGIVDCRPLLS--------QVEPATR--SQRPLEMFFPFDPYLLRRSSRFLQLKVSYVRW 631
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_002897714.1 (RNA polymerase I-specific transcription initiation factor rrn3, putative [Phytophthora infestans T30-4] >EEY64787.1 RNA polymerase I-specific transcription initiation factor rrn3, putative [Phytophthora infestans T30-4]) HSP 1 Score: 102.1 bits (253), Expect = 1.100e-17 Identity = 126/558 (22.58%), Postives = 205/558 (36.74%), Query Frame = 0 Query: 35 GSPSTLRCSAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGP--------VLPKTQEQ----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEE-GRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539 GS +TLRC+ VA + E+ + F+ AL + ++GN +Y +++ + + T ++F +L CI+T+ +P + LL LFK+D SG L + + + HLVS+ + ++ PTL ML R++ P VL +T+++ L+P L + FPH+R++ S V Y R +LRV+ Y S LR+RVLGL++++ + IDVEIK+++S E ++ D +F+ +D KLD +ML++FEH+ D V G + AA +F+ L E IL THR KY QF+LFY+ DP + + + +LL +L + P RQ+ AYL+SFL R++ +SV + +AL Sbjct: 3 GSATTLRCA-------QPVAVSPTEEEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAVSSSPTSASSDSVASSTGDKNLDVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKAL 446
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_009523651.1 (hypothetical protein PHYSODRAFT_328981 [Phytophthora sojae] >EGZ20934.1 hypothetical protein PHYSODRAFT_328981 [Phytophthora sojae]) HSP 1 Score: 99.8 bits (247), Expect = 5.400e-17 Identity = 129/558 (23.12%), Postives = 199/558 (35.66%), Query Frame = 0 Query: 45 ASAATMATVAAALHAPELVPVKSFVSTALAM-------------KLRGNGTNYVHIVNTIRSRDDMETLPR-LFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL-------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539 A +AT VAAA E+ + F+ AL + L+GN +Y +++ + + R +F +L CI+T+ +P + LL LFK++ SG L + + + HLVS+ + ++ P+L ML R++ AAP PV QEQ L+P L + FPH+R++ V Y R +LRV+ Y S LR+RVLGLII++ + IDVEIK+++S E V+ D +F+ +D KLD +ML++FEH+ D E AA +F+ L E IL THR KY QF+LFY+ DP + + + +LL +L + + P RQ+ AYL+SFL R++ +SV + +AL Sbjct: 2 AGSATSPAVAAAPTEEEVASMHHFIENALDLLIKNAHRLAYRYFLLQGNAKSYQYLITQLTLVPPPVAMRRKIFRALPRCISTMAREPRTYRALLDVLFKFNLLSSGDPLEVEDYTSFIVHLVSSNTVYVVPSLHMLVRNMRRPETKELPPDLRALQEAEKPKAPATSGGGIIIGGSFGATVAAPAPVAEVVQEQ----------PKGPSLEERIQARFEAAHQTLERVLALVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLIIDQLVAIDVEIKLDES----------------------------------EEDVFTMD-DFL--------------------DDDMLPPDDSSRQVDEMADKLDQMMLVMFEHIEQCTAAPDAATDASNEETDVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDIFISQLLTTSL-DPHTPPTTRQSCGAYLASFLARAKYISVAYLQKAL 442
BLAST of NO11G01320 vs. NCBI_GenBank
Match: OQS06128.1 (RNA polymerase I-specific transcription initiation factor rrn3 [Thraustotheca clavata]) HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16 Identity = 108/485 (22.27%), Postives = 185/485 (38.14%), Query Frame = 0 Query: 61 ELVPVKSFVSTALAMKLRGNGTNYVHIVNTIRSRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARS---LAAPGPVLPKTQEQ-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSV 532 EL V + AL KL+GN TNY I++ D + +LFL+L IT +T + D + DL+ +F +D+ + A++ LL HLV+A++ F+ PT++ML R+ +A P + K + ++ + D FPH+R+E S + Y +L+++ Y L++RVLGL++E+ + IDVEIK++++ E V + +++D + DP KLD +ML +F + ++ + R +G AH A LF L + + +L THR KY QF+LF++A A L + +L+ +L + PV R + +YL+S++ R++ L V Sbjct: 194 ELASVAGLIENALDFKLKGNATNYSLILSKFEKSTDDKERSQLFLALPRAITKLTMNMDAYRDLIHQIFSFDFMASPVVVDAYIRLLTHLVTAQTAFVQPTIKMLVRNFSRIAPPAQPVAKVVNRMTTMGTQIRAVVSSTPVLSVEEILAQFEAQLQQRYENVHKAFEIVLRLVPASIHMVFECVCDFFPHKRLETSFQLA-YLNNVLKLTTYAK------------------------------------------------GLQERVLGLLVEKLVAIDVEIKLDNTEED-----------------------------VFTMDDFLDDDCCV---------------------DPE------SDMIDENADKLDHLMLAVFTYFEQEIAR----DGNAHIA-LFNYLLKSFDQAVLNTHRSKYPQFLLFFIAKL--AQEHQELFLSQLISVSLDSKFPPV-TRHSCASYLASYVARAKYLPV 565
BLAST of NO11G01320 vs. NCBI_GenBank
Match: KUF84699.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Phytophthora nicotianae]) HSP 1 Score: 97.1 bits (240), Expect = 3.500e-16 Identity = 171/820 (20.85%), Postives = 278/820 (33.90%), Query Frame = 0 Query: 13 APPRLPALGYNKSGNGNGVAGGGSPSTLRCSAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 AP +LPA + + +AG SA + + VAA+ E+ + F+ AL + ++GN +Y +++ + + T ++F +L CI+T+ +P + LL LFK+D SG L + + + HLVS+ + ++ PTL ML R++ AAP PV+ Q+ L+P L + FPH+R++ V Y R +LRV+ Y S LR+RVLGL++++ + IDVEIK+++S E ++ D +F+ +D KLD +ML++FEH+ D V + AA +F+ L E IL THR KY QF+LFY+ DP + + + +LL +L + P RQ+ AYL+SFL R++ +SV + +AL +++ +L ++ + +F S Q V Y+V F + D G G E S V PL + + L L ++ L +D + +V + A + P +T PL+++FPFDPYLLRRS R++ +Y YW Sbjct: 202 APGQLPAQSEQQQIRSSEMAG---------SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 863
BLAST of NO11G01320 vs. NCBI_GenBank
Match: GAX99604.1 (Hypothetical protein PINS_007411 [Pythium insidiosum]) HSP 1 Score: 97.1 bits (240), Expect = 3.500e-16 Identity = 130/485 (26.80%), Postives = 200/485 (41.24%), Query Frame = 0 Query: 61 ELVPVKSFVSTALAMKLRGNGTNYVHIVNTIRSRDDMETLPR-LFLSLASCITTVTGDPDKFNDLLSALFKYDWSGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSLAAPGPVLPKTQE--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHLDRVV----GREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRAL 539 +L ++ F+ AL + L+GN TNY +++ + S T R +FL+L CI+++ +P F LL LFK+D+ A+ + + HLVS+ + ++ PTLQML R+L P + P E XXXXXXXXXXXXXXXXX + P DA +R + + L RV + T + L++R+ GLII+R + +DVEIK+++ E V D L + + +D A+ D KLD +M+L+FEH++R+V AA +F+ L E IL THR KY QF+LF++ DP + + + +LL +L + PV R + AYL+SFL R++ + V + +AL Sbjct: 41 DLQTLQEFIENALDLLLKGNSTNYQYLIRQLSSGKAHATSRRKIFLALPRCISSMAKEPKAFXQLLDVLFKFDFLVERDEVDAYTSFIVHLVSSNTVYVLPTLQMLVRNLCRPQKLPPHLAEAXXXXXXXXXXXXXXXXXXXGKIKIGGSFGVSVASSFLQTTAAPTAPVAPXDLDAIFQQR------YXDVHKTLQRVLQLVPTAA------------------NALFPRLDAPFQVAYLQNVLTLSLAVPGLQERIFGLIIDRLVAVDVEIKLDEKEE------------------DVFTMDD-----FLDDELLPDD---------------------NAKVD-------------EMADKLDHMMVLMFEHIERLVRDTSSSSSASLNATQAALVFKCLLKVFEHSILNTHRSKYPQFLLFFVCQLDP--QFQDVFISQLLAASLDPQTPPV-TRHSCGAYLASFLARAKYIPVSYLHKAL 441
BLAST of NO11G01320 vs. NCBI_GenBank
Match: XP_008899287.1 (hypothetical protein PPTG_06982 [Phytophthora parasitica INRA-310] >ETI55460.1 hypothetical protein F443_01885 [Phytophthora parasitica P1569] >ETM54938.1 hypothetical protein L914_01786 [Phytophthora parasitica] >ETN15778.1 hypothetical protein PPTG_06982 [Phytophthora parasitica INRA-310]) HSP 1 Score: 96.7 bits (239), Expect = 4.600e-16 Identity = 164/790 (20.76%), Postives = 267/790 (33.80%), Query Frame = 0 Query: 43 SAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 SA + + VAA+ E+ + F+ AL + ++GN +Y +++ + + T ++F +L CI+T+ +P + LL LFK+D SG L + + + HLVS+ + ++ PTL ML R++ AAP PV+ Q+ L+P L + FPH+R++ V Y R +LRV+ Y S LR+RVLGL++++ + IDVEIK+++S E ++ D +F+ +D KLD +ML++FEH+ D V + AA +F+ L E IL THR KY QF+LFY+ DP + + + +LL +L + P RQ+ AYL+SFL R++ +SV + +AL +++ +L ++ + +F S Q V Y+V F + D G G E S V PL + + L L ++ L +D + +V + A + P +T PL+++FPFDPYLLRRS R++ +Y YW Sbjct: 4 SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 644
BLAST of NO11G01320 vs. NCBI_GenBank
Match: ETK95246.1 (hypothetical protein L915_01809 [Phytophthora parasitica] >ETM01707.1 hypothetical protein L917_01736 [Phytophthora parasitica]) HSP 1 Score: 96.7 bits (239), Expect = 4.600e-16 Identity = 164/790 (20.76%), Postives = 267/790 (33.80%), Query Frame = 0 Query: 43 SAASAATMATVAAALHAPELVPVKSFVSTALAMKLRGNGTNYVHIVNTIR-SRDDMETLPRLFLSLASCITTVTGDPDKFNDLLSALFKYDW--SGGSLSRAAFVNLLAHLVSAKSTFLHPTLQMLARSL-----------------------------------------------AAPGPVLPKTQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYPALADAFPHRRIEGSGSVVNYARQLLRVSEYTSTLGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGAPLRDRVLGLIIERCLEIDVEIKIEDSGEARVEEKKAVAESEPTAAIAVHLAHDPSAALVLSEHVYVEDPNFIVYSXXXXXXXXXXXXXXKAQEDPRXXXXXXXXXXXXXXXKLDCVMLLLFEHL--------------DRVVGREGGEEGRAHAAQLFEGLAPTLEGPILATHRCKYVQFVLFYLAARDPAGRVPSLLVDRLLVRALREENAPVGARQAALAYLSSFLVRSRALSVGGIVRALTVMVEAAETYLARSASDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRHVLFYSICQAVFYVVGFHHSTLDGEDILGVGLGSE---SAAAAVASVECKDGMPLGSFSSSSLAQQLGLKMRLGRLACSPLRPLDHCLESVKREFLRLAHL--HAFVPAGALVGLGWGGXXXXXVQATRRNNHNPLDSYFPFDPYLLRRSSRFVATPDVYRYW 764 SA + + VAA+ E+ + F+ AL + ++GN +Y +++ + + T ++F +L CI+T+ +P + LL LFK+D SG L + + + HLVS+ + ++ PTL ML R++ AAP PV+ Q+ L+P L + FPH+R++ V Y R +LRV+ Y S LR+RVLGL++++ + IDVEIK+++S E ++ D +F+ +D KLD +ML++FEH+ D V + AA +F+ L E IL THR KY QF+LFY+ DP + + + +LL +L + P RQ+ AYL+SFL R++ +SV + +AL +++ +L ++ + +F S Q V Y+V F + D G G E S V PL + + L L ++ L +D + +V + A + P +T PL+++FPFDPYLLRRS R++ +Y YW Sbjct: 4 SATTLPSALPVAASPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYASFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQ-----------AKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVA-YLRNVLRVTGYVS------------------------------------------------GLRERVLGLVLDQLVAIDVEIKLDES----------------------------------EEDMFTMD-DFL--------------------DDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAANGDKDVDVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDP--QFQDVFISQLLATSLDPQTPPT-TRQSCGAYLASFLARAKYISVAYLQKALYHLLK----WLHDQMDIYDVAHQEQLEREGETAAERDERLLEESEKMHTTGERGF-----------QESIFISSLQTVCYMVCFRGLEIATSD---DGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSAS-----------ASTLLGQRQPLETFFPFDPYLLRRSFRYIG--PLYLYW 644 The following BLAST results are available for this feature:
BLAST of NO11G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01320 ID=NO11G01320|Name=NO11G01320|organism=Nannochloropsis oceanica|type=gene|length=5974bpback to top protein sequence of NO11G01320.1 >NO11G01320.1-protein ID=NO11G01320.1-protein|Name=NO11G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1037bpback to top Synonyms
Publications
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