NO11G00970, NO11G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_005856290.1 (phd zinc finger-containing protein [Nannochloropsis gaditana CCMP526] >EKU20070.1 phd zinc finger-containing protein [Nannochloropsis gaditana CCMP526] >EWM25130.1 phd zinc finger-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 433.3 bits (1113), Expect = 9.000e-118 Identity = 218/427 (51.05%), Postives = 289/427 (67.68%), Query Frame = 0 Query: 33 EDADNKQNQDLAVAG--LFSTHLPPRAGCESTGPMGDRAKREDCCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGGLVKAWIVDPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVDADAVAAALRASPPSLSCPSALPAFVHKVCALAGWNRRPRRLVRFVAGTNAQVAILSRVLVAKYRYATANEDAAAAQWQSVDIAMCGICYSSVGLLIRCRHHDPESEFFKCSFYAHAACAFNAGQASLLLHDVRQSPLVQIWCATHKPGPSIERPGGEAVARCLGLLLHPPPAAVEEHQHQQWQDRSRRQPLLQHLLYERKRESYGRLGGYMDDKYSLLQQRLASS-----PSGAEGARLILCWTDRAKEIYACREPHPATPIV 453 +D + Q+Q+ + + ++ P R+G + GPMGDRAK+EDCCVIC Q EF + NEI+YCD CDLGFHQQCYG+P+VP+GDFFC+FC++A++ S+ K A +CELC Q+GGGL++ WIVD C+ A A + SL P A P FVHKVCALAGWN++P RLVRFVAGTNAQVA++SR +VA YR A E+ A++WQ+ D CGIC SSVGLL+RC HHDP+S F+CSF AHAACAFNA QASLLLHDV++SPLV +WC+ H+P PS+ERPGG+AVA+CLG LL P + +++H+ Q + PLL+HL++ER++E YGRLGGY+DDK LL++R++ + P+ + RLILC RA+E++ACR+ PATP V Sbjct: 19 DDKGDLQSQNFGASNQCVENSTQPTRSG--AMGPMGDRAKKEDCCVICFQGEFQS-TNEIVYCDACDLGFHQQCYGLPRVPEGDFFCDFCAIARDISNTDKRI-APMCELCHQKGGGLLRIWIVD-----RGEGQYSDEDYVRDGSEDEDNDCGSTFEVAACIRPSDKANAFASISTSLPNPLAEPLFVHKVCALAGWNQQP-RLVRFVAGTNAQVAVVSRDIVATYRNLKAQEETMASRWQAADALSCGICDSSVGLLVRCCHHDPDSAVFRCSFSAHAACAFNAAQASLLLHDVQRSPLVTVWCSAHRPEPSVERPGGDAVAKCLGFLLPPLASPLDQHEQDGRQYQPCHTPLLRHLVHERRKEGYGRLGGYLDDKLRLLERRMSLAGALPVPTHSTDGRLILCAAGRAEEMFACRQRLPATPEV 435
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_003058521.1 (PHD zinc finger protein [Micromonas pusilla CCMP1545] >EEH56976.1 PHD zinc finger protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 75.1 bits (183), Expect = 6.300e-10 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 63 GPMGDRAKREDCCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGGL 149 GPM + + C V + E +D N I+YC++C + HQ CYG+ K+P GD+FC+ C V +A +KKNA C LC GG L Sbjct: 199 GPMTEEEMADACHVCWNGESYDD--NVILYCEKCLVPVHQACYGIKKIPKGDWFCKAC-VKTKADGKKKNAKPPACCLCPVPGGAL 281
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_005856317.1 (kinesin-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20040.1 kinesin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 72.8 bits (177), Expect = 3.100e-9 Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 0 Query: 27 QGEREMEDADNKQNQDLAVAGLFSTHLPPRAGCESTGPMGDRAKRED----CCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGG 148 +G R+ E NK +++ A +S + R + + A ED C++C + + NEI++CD CD+ HQ CYG+P+VP+GDFFC+ C E DR P A C LC + GG Sbjct: 367 RGLRDQEPDFNKHKEEVLPAS-WSLPVDGRPPPPAPEALAREAATEDVDDSICMVCF-DGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDR----PIA-CTLCPEVHGG 484
BLAST of NO11G00970 vs. NCBI_GenBank
Match: CDM81653.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 72.8 bits (177), Expect = 3.100e-9 Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 75 CVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVP---KVPDGDFFCEFCSVAKEASDRKKNAPA-AVCELCRQRGGGL 149 C +C + D Q + I++CD CDL H CYG P +PDGD+FC CSV A+ KK PA C LC RGG + Sbjct: 589 CAVCRSTDGD-QSDPIVFCDGCDLMVHATCYGNPLAQSIPDGDWFCSLCSVKPAAAAGKKGKPARPPCRLCPARGGAM 665
BLAST of NO11G00970 vs. NCBI_GenBank
Match: EWM24254.1 (bromodomain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 72.8 bits (177), Expect = 3.100e-9 Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 0 Query: 27 QGEREMEDADNKQNQDLAVAGLFSTHLPPRAGCESTGPMGDRAKRED----CCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGG 148 +G R+ E NK +++ A +S + R + + A ED C++C + + NEI++CD CD+ HQ CYG+P+VP+GDFFC+ C E DR P A C LC + GG Sbjct: 665 RGLRDQEPDFNKHKEEVLPAS-WSLPVDGRPPPPAPEALAREAATEDVDDSICMVCF-DGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDR----PIA-CTLCPEVHGG 782
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_012757193.1 (hypothetical protein SAMD00019534_024410 [Acytostelium subglobosum LB1] >GAM19266.1 hypothetical protein SAMD00019534_024410 [Acytostelium subglobosum LB1]) HSP 1 Score: 71.6 bits (174), Expect = 6.900e-9 Identity = 44/133 (33.08%), Postives = 60/133 (45.11%), Query Frame = 0 Query: 16 EDDFEDVIPRQQGEREMEDADNKQNQDLAVAGLFSTHLPPRAGCESTGPMGDRAKREDCCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGGL 149 EDDFE+VI R E E KQ+ + FS H + ED C +C D N+I+YCD CD+ HQ+CYG+ +P+G +FC+ C A N C LC++ G L Sbjct: 225 EDDFEEVIDR----LEKETFAYKQSIGSDMFPHFSAH-----------------EAEDVCSVCFDGTSD-DTNQIVYCDGCDIAVHQECYGIVLIPEGHWFCQKCESA--------NKDNITCALCKKSSGAL 327
BLAST of NO11G00970 vs. NCBI_GenBank
Match: ORX71078.1 (hypothetical protein DL89DRAFT_274394 [Linderina pennispora]) HSP 1 Score: 71.6 bits (174), Expect = 6.900e-9 Identity = 32/76 (42.11%), Postives = 41/76 (53.95%), Query Frame = 0 Query: 75 CVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGGLVK 151 C IC +EE D N I++CD C+L HQ CYGVP +P+G + C C +A + A C C QRGG K Sbjct: 72 CAICGEEECD-NTNAIVFCDGCNLAVHQDCYGVPYIPEGQWLCRRCMLAPD--------KAVACMFCPQRGGAFKK 138
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_018734790.1 (Nto1p [Sugiyamaella lignohabitans] >ANB12313.1 Nto1p [Sugiyamaella lignohabitans]) HSP 1 Score: 71.2 bits (173), Expect = 9.000e-9 Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 57 AGCESTGPMGDRAKREDCCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGG 148 AG +S P D + E+ CVIC E D N I++CD CD+ HQ CYGVP +P+G + C C+V++ A C C R GG Sbjct: 443 AGKDSLLP-SDATETEEKCVICDDSECD-NSNAIVFCDGCDIAVHQDCYGVPFIPEGQWLCRQCTVSRRL--------RASCIFCPNRSGG 523
BLAST of NO11G00970 vs. NCBI_GenBank
Match: XP_024663694.1 (NuA3 HAT complex component NTO1 [[Candida] sorbophila] >PRT53748.1 NuA3 HAT complex component NTO1 [[Candida] sorbophila]) HSP 1 Score: 70.9 bits (172), Expect = 1.200e-8 Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0 Query: 75 CVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAA--VCELCRQRGGGLVK 151 CVIC++ + D +N I+YCD CD+ HQ+CYGVP +P+G + C C K APA C C R G L K Sbjct: 187 CVICNEADVD-NLNSIVYCDGCDIAVHQECYGVPFIPEGQWLCRRC---------KAQAPATSISCLFCPHRSGALTK 254
BLAST of NO11G00970 vs. NCBI_GenBank
Match: OQS00722.1 (DEAD/DEAH box RNA helicase, partial [Thraustotheca clavata]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0 Query: 52 HLPPRAGCESTGPMGDRAKREDCCVICHQEEFDAQVNEIIYCDRCDLGFHQQCYGVPKVPDGDFFCEFCSVAKEASDRKKNAPAAVCELCRQRGGG----LVKAWI 154 + P +A +ST EDC V FD N I++CD C++G HQ+CYGV +VP+G +FC+FCS K+ + K C LC G L K W+ Sbjct: 1197 YTPDKAPSQSTD--------EDCQVCGETYSFDC--NPILFCDGCNIGVHQECYGVQEVPNGSWFCDFCSKVKKGTKPK-------CALCPIVKGAYKQTLCKQWV 1285 The following BLAST results are available for this feature:
BLAST of NO11G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00970 ID=NO11G00970|Name=NO11G00970|organism=Nannochloropsis oceanica|type=gene|length=1718bpback to top protein sequence of NO11G00970.1 >NO11G00970.1-protein ID=NO11G00970.1-protein|Name=NO11G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bpback to top Synonyms
Publications
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