NO11G00340, NO11G00340 (gene) Nannochloropsis oceanica

Overview
NameNO11G00340
Unique NameNO11G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6962
Alignment locationchr11:145965..152926 -

Link to JBrowse

Properties
Property NameValue
DescriptionC2 domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:145965..152926 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO:0008289lipid binding
Vocabulary: INTERPRO
TermDefinition
IPR031468SMP_LBD
IPR039010Synaptotagmin_SMP
IPR000008C2_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Homology
BLAST of NO11G00340 vs. NCBI_GenBank
Match: EWM27283.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 254.2 bits (648), Expect = 1.200e-63
Identity = 187/644 (29.04%), Postives = 323/644 (50.16%), Query Frame = 0
Query:    1 MLVPGILVVAASVLSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLLLRDN-HHNEISESRIVLNLGLGFHAPDLEVVVAAKTVAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLI--PAECGPVEAAKGVLFVSV-------------DKAMYKETNALDVMSVGSSEVYAEIKVGKDVVRTQAV---------------------------SNGKGEVL----------------------------YAFGGETLAVLVKGNL-AAEKVTIYLRQRRMSGHRLLGKVYVPVADIVN--SPNSTI---TETLDLEA-GNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGST-----GSLLVRLHQGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFP-KTLSPKFEWNKEYVVQDIDRVRFTLRVFDK-EEIGSSDAMGDLDIDMKEIFPIKNQ-GTGERDFVVLKKWMPLRAP 559
            +LVP ++      L W  G+   S   +L   ++V  ++  LR+RL RAA + A R A RKR++ ++E+AEW+N +L+R WQF+EP+L  NLR+     LDA  P+ +   E+   TLGK  PF+SSAR++ +     +++ E RIV++L +GF AP LE+V+ AKT   ++P+ +K+ + +G +R E++L+P +PH +T   TFL+ P+ +F + P+  V++ ++P L+  +   I++GI+E+L++P K+V +LI   +E   +EAA G++ V++               A  KE N     S+ +S    ++ VG DV+ T+ V                           S G G  L                              FGGET A L+ GN+ A + V + L Q+R    R +  + VP+ + +N  +P   +      LD +A G G +T    +  L ++ +E+           T    +  V + +   V++ A ++  +  T     GSL++ LH+ ++L   D  G  D +A +F   + + +T   P KTLSP++E ++E+   D+ R+R  + +FD     G   AM + D+D+  +F  +     G R   + K+++ L  P
Sbjct:  105 ILVPAVMCGFLGPLCWVFGRQGWSYSYALWSSTLVIYAVYGLRERLRRAARMEATRIASRKRILQEDETAEWLNIILFRVWQFHEPLLSANLRQDFLQKLDAVRPSRVLAFEIPLFTLGKKSPFMSSARIITKTQFSDSKVPEDRIVMHLTMGFQAPGLEIVILAKTSYGTIPIKIKDFYLQGRMRCEMDLIPKYPHIQTASFTFLETPVCEFDIQPM-GVSLMEVPYLAAIVQAQIVHGINEHLLDPAKVVFNLIETQSEATSIEAADGIMLVTLLEVELPQGGRVFGSSAHPKENN-----SLAASAYNVKLHVGDDVMYTKNVREEEGAPEESWGGRMRMLGAPSTTAFNSMGSGPALTSPRRPDRLSKALSRRLNLNHREIRQPRLVFGGETFAFLIGGNVGAVDTVQLTLNQKRTQTSRTICSLTVPLEEALNPRAPAGGLQVQVPLLDGQADGRGEITLGLRYMRLPEIVLEQ-----------TLPTVIHRVNERTLSPVNMDADSLGLLKDTDHPHAGSLVIILHKAEELPSVDVLGVQDCYAVVFAGEREIFRTKKSPTKTLSPEWEQSREFSTFDVRRIRLKVAIFDTGRNGGEKGAMAEADMDLCSLFTTEEAIHFGRRASRIHKRYLRLHRP 731          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: XP_020917415.1 (tricalbin-1-like isoform X1 [Exaiptasia pallida] >KXJ28222.1 Tricalbin-1 [Exaiptasia pallida])

HSP 1 Score: 159.8 bits (403), Expect = 3.100e-35
Identity = 135/554 (24.37%), Postives = 252/554 (45.49%), Query Frame = 0
Query:   14 LSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLL-------------LRDNHH---NEISESR---IVLNLGLGFHAPDLEVVV----AAKTVAASLPLAVKNVWFEGMLRV--EIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLIPAECGPV-------EAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKVGKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHR-LLGKVYVPVADIVNSPNSTITETLDLEAGNGS-VTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDKEEIG---SSDAMGDLDIDM 531
            L+W  G +  S L  + +  + +        R+       A+    +K+ + DEE+ EW+N +L R+W F E  LCQ +R A+ P LD + P+ ++ +EL   + GK  PF+   ++                DN     ++I + +   +VLN+ L  +APD ++++      K V A + +++++V   G +++  E++ V  FPH K+V VTFL+KP +DF V  L++V + D+P L  FI+ L+++ ++  LV+P ++ I L   +   +         A GVL ++V   + ++            +++   K+G    +      G          E+ ++LV  +L  + V I +R +R+ G + +L K  + +  +       +   L+ E   GS +  T  +  L  V +      +E        E V+EV                    +G LLV LH G  L   D++G+SDP+  +    + +  T     T++P ++   E+ V+DI +      V+D++      S D MG   +++
Sbjct:   34 LAWFLGAFGFSYLWCVFLIPLYFTVFYRKNSRIIEGRVKEAEIYVHQKKALRDEETTEWLNFILNRWWNFSEASLCQLVRGALNPVLDYSRPSFIENMELVEFSFGKRTPFLKYVKVFENIDEGDSPNIPATTDNAFQPPDDIQKRQRHLLVLNMDLCLNAPDTKIIIRVRLGGKMVGADVDVSLEDVNLSGRMQIVFEMDHVIPFPHMKSVAVTFLEKPQVDFDVCMLRAVQVMDIPMLKDFINALVMDSLTYALVDPGRIEIPLYSVDAEELLNASRKSAYAAGVLTLTVKGGLPQKFT--------DDQIFTSFKIGDQEEKCSEKIQGG-----TTWEESFSLLVY-DLPTDNVAIEIRGKRVFGTKYVLAKYKIFLNTLGLEKKKKVDTVLEKEGIKGSRLEVTLEYTTLKHVEISSRTDEKEFMEKYNMNEPVNEV--------------------SGVLLVVLHSGSKLLSMDADGYSDPYCIITANKEKIKTTTHVQGTVNPVWDSITEFFVKDITKTNLFFLVYDRDRNWQGLSDDFMGSCPLNL 553          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: XP_020623204.1 (tricalbin-1-like [Orbicella faveolata])

HSP 1 Score: 155.2 bits (391), Expect = 7.600e-34
Identity = 141/564 (25.00%), Postives = 265/564 (46.99%), Query Frame = 0
Query:    6 ILVVAASVLSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLL--LRDNHHNEI--SESR---------------IVLNLGLGFHAPDLEVVV----AAKTVAASLPLAVKNVWFEGMLRVEIE---LVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLIPAECGP-VEAAK------GVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKVGK-DVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRL-LGKVYVPVADIVNSPNSTITETLDLEAGNGS-VTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDKE---EIGSSDAMGDLDIDM 531
            + V A   ++W  G +  S + +  I  +++        R+       A+    R++ + DEE+AEW+N VL R+W F E  LC  +R ++ P LD + P+ ++ +EL   + GK  PF+   ++   + +N   +I  SES                +VL + L  HAPD ++ +      K V A + +++++V   G +++  E   LVP FPH K+V VTFL+KP +DF V  +++V + D+P L  FI+ L+++ ++  LV+P ++ + L   +    + AAK      G+L V++   M ++            +++  ++VG  D   T+ +  G          E++++L+  +LA +K+ I +R +R  G +  + K  + +  +       +  TL  E   GS +  T  +  L    V           V    EK  +  ++S                +G LLV +H G+ L   D +G+SDP+  +    + V  TP    +++P ++   E++V+D  +   +  V+D++   +  S D MG  +++M
Sbjct:   26 LFVCAVVAITWFLGAFGFSFVWTGFIIPLIFTVWYRKNCRIIDDRVREAEIQVHRRKALRDEETAEWLNFVLNRWWNFSEVSLCNLVRSSLNPVLDYSKPSFIEAMELTEFSFGKKTPFLKYVKVFENIDENESPDIPASESNAFSPPSDMATRQRHLLVLVMDLCLHAPDTKIAIKVRLGGKMVGADVDVSIEDVSLSGRVQIVFEMDHLVP-FPHMKSVSVTFLEKPDVDFDVRLMRAVQVMDIPMLKDFINALVMDSLTYALVDPGRIQVPLHGVDPDELLSAAKKSTYADGILTVTLKGGMPQKYT--------DDQIWTSLEVGNLDEKSTEKIQGG------TTFEESISLLIY-DLANDKLNIEIRGKRTFGTKYSIAKYKMFLGSLGLEKKKKVETTLSKEGIKGSKLEITLEYTRLKPYEV------SSRTDVDEFLEKYEKPNEESP--------------VSGLLLVVVHSGEKLLAMDDDGYSDPYCIVTANKEKVKITPHVSGSVNPVWDSVVEFLVKDFTKTSVSFLVYDRDVNWQGQSDDFMGSCNLEM 553          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: PFX19515.1 (Tricalbin-1 [Stylophora pistillata])

HSP 1 Score: 155.2 bits (391), Expect = 7.600e-34
Identity = 141/563 (25.04%), Postives = 262/563 (46.54%), Query Frame = 0
Query:    6 ILVVAASVLSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLL--LRDNHHNEISESR-----------------IVLNLGLGFHAPDLEVVV----AAKTVAASLPLAVKNVWFEGMLRVEIE---LVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLIPAECGP-VEAAK------GVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKVGK-DVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRL-LGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDKE---EIGSSDAMGDLDIDM 531
            + V A   ++W  G Y  S + +  I  +++        RL       A+    R++ + DEE+AEW+N VL R+W F E  LC  +R ++ P L+ + P+ ++ +EL   + GK  PF+   ++   + +N   +I  S                  +VL + L  HAPD ++ +      K V A + +++++V   G +++  E   LVP FPH K V +TFL+KP +DF V  +++V + D+P L  FI+ L+++ ++  LV+P ++ + L   +    + AAK      G+L V++   M ++            +++  ++VG  D   T+ +  G          E++++L+  +LA +K+ I +R +R  G +  + K  + +  +       +  TL  E   GS           +V++E       + S  T  ++  E     T+   V          +G LLV +H G+ L   D +GFSDP+  +    + V  TP    +++P +E   E+ V+D  +   +  V+D++   +  S D MG  ++ M
Sbjct:   26 LFVCAVVAITWFLGAYGFSFVWAGFIIPLIFTVWYRKNCRLIDDRVREAEIKVHRRKALRDEETAEWLNFVLNRWWNFSEVSLCNLVRSSLNPVLEYSKPSFIETMELTEFSFGKKTPFLKYVKVFENIDENDSPDIPASESTAFNPPKDLATRQRHLLVLVMDLCLHAPDTKIAIKVRLGGKMVGADVDVSIEDVSLSGRVQIVFEMDHLVP-FPHMKAVSITFLEKPDVDFDVRLMRAVQVMDMPMLKDFINALVMDSLTYALVDPGRIEVPLHGVDPDELLSAAKKSTYADGLLTVTLKGGMLQKYT--------DDQIWTSLQVGNLDEQNTEKIQGG------TTFEESISILIY-DLANDKLNIEVRGKRTFGTKYSIAKYKMYLGSLGLEKKKKVETTLSKEGIKGS---------KLEVSLEYTQLKPYEVSSRTDEQEFLEKYQKPTEESPV----------SGLLLVVVHGGEKLLAMDDDGFSDPYCIMAANREKVRTTPHVSGSVNPVWESVVEFPVKDFTKTNVSFLVYDRDVNWQGQSDDFMGSCNLQM 553          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: XP_022800251.1 (tricalbin-1-like [Stylophora pistillata])

HSP 1 Score: 155.2 bits (391), Expect = 7.600e-34
Identity = 141/563 (25.04%), Postives = 262/563 (46.54%), Query Frame = 0
Query:    6 ILVVAASVLSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLL--LRDNHHNEISESR-----------------IVLNLGLGFHAPDLEVVV----AAKTVAASLPLAVKNVWFEGMLRVEIE---LVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLIPAECGP-VEAAK------GVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKVGK-DVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRL-LGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDKE---EIGSSDAMGDLDIDM 531
            + V A   ++W  G Y  S + +  I  +++        RL       A+    R++ + DEE+AEW+N VL R+W F E  LC  +R ++ P L+ + P+ ++ +EL   + GK  PF+   ++   + +N   +I  S                  +VL + L  HAPD ++ +      K V A + +++++V   G +++  E   LVP FPH K V +TFL+KP +DF V  +++V + D+P L  FI+ L+++ ++  LV+P ++ + L   +    + AAK      G+L V++   M ++            +++  ++VG  D   T+ +  G          E++++L+  +LA +K+ I +R +R  G +  + K  + +  +       +  TL  E   GS           +V++E       + S  T  ++  E     T+   V          +G LLV +H G+ L   D +GFSDP+  +    + V  TP    +++P +E   E+ V+D  +   +  V+D++   +  S D MG  ++ M
Sbjct:   26 LFVCAVVAITWFLGAYGFSFVWAGFIIPLIFTVWYRKNCRLIDDRVREAEIKVHRRKALRDEETAEWLNFVLNRWWNFSEVSLCNLVRSSLNPVLEYSKPSFIETMELTEFSFGKKTPFLKYVKVFENIDENDSPDIPASESTAFNPPKDLATRQRHLLVLVMDLCLHAPDTKIAIKVRLGGKMVGADVDVSIEDVSLSGRVQIVFEMDHLVP-FPHMKAVSITFLEKPDVDFDVRLMRAVQVMDMPMLKDFINALVMDSLTYALVDPGRIEVPLHGVDPDELLSAAKKSTYADGLLTVTLKGGMLQKYT--------DDQIWTSLQVGNLDEQNTEKIQGG------TTFEESISILIY-DLANDKLNIEVRGKRTFGTKYSIAKYKMYLGSLGLEKKKKVETTLSKEGIKGS---------KLEVSLEYTQLKPYEVSSRTDEQEFLEKYQKPTEESPV----------SGLLLVVVHGGEKLLAMDDDGFSDPYCIMAANREKVRTTPHVSGSVNPVWESVVEFPVKDFTKTNVSFLVYDRDVNWQGQSDDFMGSCNLQM 553          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: KZT23846.1 (tricalbin [Neolentinus lepideus HHB14362 ss-1])

HSP 1 Score: 148.7 bits (374), Expect = 7.100e-32
Identity = 156/642 (24.30%), Postives = 270/642 (42.06%), Query Frame = 0
Query:    7 LVVAASVLSWTAGKYNMS---VLVSLGIGSVVYLSIKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSAR--------LLLRD-------NHHNEISESRIVLNLGLGFHAPDLEVVVAAKTVAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKLVIDLIPAECG-PVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKVGK--DVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRLLGKVYVPVADIVNSPNSTITETLDLEA-----GNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAP-KDSNGFSDPFASLFY--TNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDKEEIGSSDAMGDLDIDMKEIFPIKNQGTGERDFVVLKKWMPLRAPGPVIETTRTAADLKRRAPAKKETGFGH------VLLSFIFRPTDIPPGLSNFQADLGNPED 614
            L+  A  +S    ++N     + + L I +  Y    T   R+ R A     R   + R+  + ESA+WIN  L RFW  YEPVL   +  ++   L  NTPA L  L L   TLG   P I   R        +++ D         H++++E +I L +        L V V       ++P+ ++++ F G++R++++L+ ++PH +TV ++FL+KP+ D+ + PL   +I D+PGLS FI +++ + +   + +P    ++L     G P++AA GVL V++      + + +     G+ + Y  + +    ++ RT+     KG        ET  +LV     +   T+ L     + HR   ++     D+         E L+ E        G++    +F  + K  V +G     D +V                               G + + LHQ +DL P K   G  +PFA +F       +  T  F  TLSP +E + E++  D      T+++ D  +      +G + + ++++   K +        V K W PL   G      R +A+ K    A    G         V+  +I R TD+     N +A LG   D
Sbjct:  161 LIFFAVFMSHFLTRFNFGWGWLFIVLAISNTYY---STSMRRVRRRARDDIQRELVKTRLASEHESADWINNFLDRFWLIYEPVLSATIISSVDQILSVNTPAFLDSLRLSTFTLGTKAPRIDKVRTFPKTADDIVMMDWGISFTPTDHSDLTEKQIKLKVNPKI---VLSVRVGKGIAGVTMPVLLEDLTFIGLMRIKMKLMTNYPHIQTVDISFLEKPVFDYVLKPLGGFDINDIPGLSPFIRDMVHSILGPMMYDPNVFTLNLEQLLSGAPLDAAIGVLQVTIQSGRSLKGSKI---GGGTPDPYVSLSISNRGELARTKY----KGNTYNPSWNETKFLLVN----SLSDTLVLSVFDYNDHRKNTELGSATFDLSKLQEDATLENLEAEVLKDGKERGTLRFDLSFYPVLKPEVVDGKEELPDTTV-------------------------------GIVRLTLHQAKDLDPSKSMTGDLNPFAKVFLGDNKNSIHSTTKFKHTLSPVWESSTEFLCSDKQSSVITVKIIDDRDFMKDPVVGFMRLRLEDLLEAKKE--------VGKDWWPL--SGCKSGRVRMSAEWKPLNLAGSLHGVDQYTPPIGVVKLWIDRATDV----KNVEAALGGKSD 740          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: PKY46578.1 (hypothetical protein RhiirA4_543417 [Rhizophagus irregularis])

HSP 1 Score: 146.0 bits (367), Expect = 4.600e-31
Identity = 134/508 (26.38%), Postives = 226/508 (44.49%), Query Frame = 0
Query:   39 IKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLLLRDNHHNEISESRIVLNLGLGFHAPDLEVVVAAKT------------------VAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNI-FDL---PGLSQFISNLIINGISENLVNPEKLVIDLIPAECG-PVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEI--------KVGKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRLLGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSN-GFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDK 515
            +K   +R  R A     R   R+++  DEE  EW+N  L RFW  YEP L +++ +     L A+TP  L  L+L   TLG  PP I S R   ++N      ++ +V++  + F   DL  +  A+                   V A +P+ ++N+ F G+LRV+++L+P+FPH +T+   FL+KP ID+ + P+    + FD+   PGLS FI + +   +   +  P    +       G PVE++ GVL + +  A     +  +  + G+S+ Y ++        +VGK++ RT+ +SN    V      ET  +L      + K  IY     ++   LLG   VP+ +   +PN +  +T+ +   NG       + A+    V+     E+D  V  +                          + G L   LHQ +DL PK S  G  +P+  L Y  K +  +  F ++ +P +E   E  + D  +    L + D+
Sbjct:  118 LKNSVNRFYRNAKSDISRKIAREKLEVDEEKVEWLNEFLRRFWLIYEPELSKSIIQIADTVLSASTPGFLDSLKLTNFTLGTKPPVIESIRSYPKEN------DNEVVMDWRVSFEPNDLAEMTKAQLVKKVNPKVILTVRVGRGFVGAGIPILLENMSFTGLLRVKLKLIPNFPHVETIEFGFLEKPNIDYVLKPIGGETLGFDIGIVPGLSSFIKDQVHATLQPMMYPPNTYQLKTEHLLYGFPVESSIGVLKLKIKNA----KSLRNAETFGTSDPYCKVVLISSDVTEVGKELTRTKDISNSLNPV----WDETHYLLFNNLRDSFKFQIYDSNGSLNSDTLLGDTTVPLKNFEETPNQS-NKTIPV-YHNGKQKGELNYDAVWYPIVKT----EKDKPVPES--------------------------NIGILKFNLHQAKDLDPKYSMVGVYNPYVDLKYNGKKMFTSKTFRRSNNPTWEEFFEIFITDRKKASLELNIRDE 579          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: PKY15985.1 (hypothetical protein RhiirB3_479229 [Rhizophagus irregularis])

HSP 1 Score: 145.2 bits (365), Expect = 7.900e-31
Identity = 133/508 (26.18%), Postives = 227/508 (44.69%), Query Frame = 0
Query:   39 IKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLLLRDNHHNEISESRIVLNLGLGFHAPDLEVVVAAKT------------------VAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNI-FDL---PGLSQFISNLIINGISENLVNPEKLVIDLIPAECG-PVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEI--------KVGKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRLLGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSN-GFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDK 515
            +K   +R  R A     R   R+++  DEE  EW+N  L RFW  YEP L +++ +     L A+TP  L  L+L   TLG  PP I S R   ++N      ++++V++  + F   DL  +  A+                   V A +P+ ++N+ F G+LRV+++L+P+FPH +T+   FL+KP ID+ + P+    + FD+   PGLS FI + +   +   +  P    +       G PVE++ GVL +++  A     +  +  + G+S+ Y ++        + GK++ RT+ +SN    V      ET  +L      + K  IY     ++   LLG   VP+ +   +PN +  +T+ +   NG       + A+    V+     E+D  V  +                          + G L   LHQ +DL PK S  G  +P+  L Y  K +  +  F ++ +P +E   E  + D  +    L + D+
Sbjct:  118 LKNSVNRFYRNAKSDISRKIAREKLEVDEEKVEWLNEFLRRFWLIYEPELSKSIIQIADTVLSASTPGFLDSLKLTNFTLGTKPPVIESIRSYPKEN------DNKVVMDWRVSFEPNDLAEMTKAQLVKKVNPKVILTVRVGRGFVGAGIPILLENMSFTGLLRVKLKLIPNFPHVETIEFGFLEKPNIDYVLKPIGGETLGFDIGIVPGLSSFIKDQVHATLQPMMYPPNTYQLKTEHLLYGFPVESSIGVLKLTIKNA----KSLRNAETFGTSDPYCKVVLISSDVTEAGKELTRTKHISNSLNPV----WDETHYLLFHNLRDSFKFQIYDSNGSLNSDTLLGDTTVPLKNFEETPNQS-NKTIPV-YHNGKQKGELNYDAVWYPIVKT----EKDKPVPES--------------------------NIGILKFNLHQAKDLDPKYSMVGVYNPYVDLKYNGKKMFTSKTFRRSNNPTWEEFFEIFITDRKKASLELNIRDE 579          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: PKC07454.1 (hypothetical protein RhiirA5_479954 [Rhizophagus irregularis])

HSP 1 Score: 144.4 bits (363), Expect = 1.300e-30
Identity = 133/508 (26.18%), Postives = 226/508 (44.49%), Query Frame = 0
Query:   39 IKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLLLRDNHHNEISESRIVLNLGLGFHAPDLEVVVAAKT------------------VAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNI-FDL---PGLSQFISNLIINGISENLVNPEKLVIDLIPAECG-PVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEI--------KVGKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRLLGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLHQGQDLAPKDSN-GFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDK 515
            +K   +R  R A     R   R+++  DEE  EW+N  L RFW  YEP L +++ +     L A+TP  L  L+L   TLG  PP I S R   ++N      ++ +V++  + F   DL  +  A+                   V A +P+ ++N+ F G+LRV+++L+P+FPH +T+   FL+KP ID+ + P+    + FD+   PGLS FI + +   +   +  P    +       G PVE++ GVL +++  A     +  +  + G+S+ Y ++        + GK++ RT+ +SN    V      ET  +L      + K  IY     ++   LLG   VP+ +   +PN +  +T+ +   NG       + A+    V+     E+D  V  +                          + G L   LHQ +DL PK S  G  +P+  L Y  K +  +  F ++ +P +E   E  + D  +    L + D+
Sbjct:  118 LKNSVNRFYRNAKSDISRKIAREKLEVDEEKVEWLNEFLRRFWLIYEPELSKSIIQIADTVLSASTPGFLDSLKLTNFTLGTKPPVIESIRSYPKEN------DNEVVMDWRVSFEPNDLAEMTKAQLVKKVNPKVILTVRVGRGFVGAGIPILLENMSFTGLLRVKLKLIPNFPHVETIEFGFLEKPNIDYVLKPIGGETLGFDIGIVPGLSSFIKDQVHATLQPMMYPPNTYQLKTEHLLYGFPVESSIGVLKLTIKNA----KSLRNAETFGTSDPYCKVVLISSDVTEAGKELTRTKHISNSLNPV----WDETHYLLFHNLRDSFKFQIYDSNGSLNSDTLLGDTTVPLKNFEETPNQS-NKTIPV-YHNGKQKGELNYDAVWYPIVKT----EKDKPVPES--------------------------NIGILKFNLHQAKDLDPKYSMVGVYNPYVDLKYNGKKMFTSKTFRRSNNPTWEEFFEIFITDRKKASLELNIRDE 579          
BLAST of NO11G00340 vs. NCBI_GenBank
Match: PKK80169.1 (hypothetical protein RhiirC2_725099 [Rhizophagus irregularis])

HSP 1 Score: 144.4 bits (363), Expect = 1.300e-30
Identity = 133/510 (26.08%), Postives = 223/510 (43.73%), Query Frame = 0
Query:   39 IKTLRDRLTRAATIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPALDANTPAGLKRLELGRLTLGKTPPFISSARLLLRDNHHNEISESRIVLNLGLGFHAPDLEVVVAAKT------------------VAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTVLVTFLDKPIIDFSVIPLKSVNI-FDL---PGLSQFISNLIINGISENLVNPEKLVIDLIPAECG-PVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEI--------KVGKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSGHRLLGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVEEGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSV--GSTGSLLVRLHQGQDLAPKDSN-GFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQDIDRVRFTLRVFDK 515
            +K   +R  R A     R   R+++  DEE  EW+N  L RFW  YEP L +++ +     L A+TP  L  L+L   TLG  PP I S R   ++N      ++ +V++  + F   DL  +  A+                   V A +P+ ++N+ F G+LRV+++L+P+FPH +T+   FL+KP ID+ + P+    + FD+   PGLS FI + +   +   +  P    +       G PVE++ GVL +++  A     +  +  + G+S+ Y ++        +VGK++ RT+ +SN    V      ET  +L      + K  IY     ++   LLG   VP+ +   +PN +                                   +   V    ++  E+  D+     V A   K V   + G L   LHQ +DL PK S  G  +P+  L Y  K +  +  F ++ +P +E   E  + D  +    L + D+
Sbjct:  118 LKNSVNRFYRNAKSDISRKIAREKLEVDEEKVEWLNEFLRRFWLIYEPELSKSIIQIADTVLSASTPGFLDSLKLTNFTLGTKPPVIESIRSYPKEN------DNEVVMDWRVSFEPNDLAEMTKAQLVKKVNPKVILTVRVGRGFVGAGIPILLENMSFTGLLRVKLKLIPNFPHVETIEFGFLEKPNIDYVLKPIGGETLGFDIGIVPGLSSFIKDQVHATLQPMMYPPNTYQLKTEHLLYGFPVESSIGVLKLTIKNA----KSLRNAETFGTSDPYCKVVLISSDVTEVGKELTRTKHISNSLNPV----WDETHYLLFNNLRDSFKFQIYDSNGSLNSDTLLGDTTVPLKNFEETPNQS----------------------------------NKTIPVYHNGKQKGELNYDAVWYPIVKAEKDKPVPESNIGILKFNLHQAKDLDPKYSMVGVYNPYVDLKYNGKKMFTSKTFRRSNNPTWEEFFEIFITDRKKASLELNIRDE 579          
The following BLAST results are available for this feature:
BLAST of NO11G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27283.11.200e-6329.04transmembrane protein [Nannochloropsis gaditana][more]
XP_020917415.13.100e-3524.37tricalbin-1-like isoform X1 [Exaiptasia pallida] >... [more]
XP_020623204.17.600e-3425.00tricalbin-1-like [Orbicella faveolata][more]
PFX19515.17.600e-3425.04Tricalbin-1 [Stylophora pistillata][more]
XP_022800251.17.600e-3425.04tricalbin-1-like [Stylophora pistillata][more]
KZT23846.17.100e-3224.30tricalbin [Neolentinus lepideus HHB14362 ss-1][more]
PKY46578.14.600e-3126.38hypothetical protein RhiirA4_543417 [Rhizophagus i... [more]
PKY15985.17.900e-3126.18hypothetical protein RhiirB3_479229 [Rhizophagus i... [more]
PKC07454.11.300e-3026.18hypothetical protein RhiirA5_479954 [Rhizophagus i... [more]
PKK80169.11.300e-3026.08hypothetical protein RhiirC2_725099 [Rhizophagus i... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007468NSK007468Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00340.1NO11G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|319308gene_10261Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00340.1NO11G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00340 ID=NO11G00340|Name=NO11G00340|organism=Nannochloropsis oceanica|type=gene|length=6962bp
TTTGTTCCTTCATGGACACCCAATCAAAATTAAGTGCGGCCCTGAGTCCT
TGTAAACTATCGATACATAAACATAAACACACGGCGTTAATCCGTGTGTA
TGCATCTTATCCCCTTCCCCATCCCCAATGGACTGCTGTTTGTTTCGTCC
TCTTTTCCTTCTTGCCCTCGACAGCGATAAAAGCTCAAGGCTCAAGCTGA
TATTTTCCTCCGAGCGGGCCGCGGACTGTATTCAGCCCTCTGTGTCCCAT
CCTCCTACCTCTCCCAAGGATTTTTCCCGATCCATTAAGCCTGCCTTAAC
AATCCTTCCCTCCAGTTCATTTGCTGAACCTGTCTGGCAGGGTTTTGGGC
TTCTAAGAGGGGTGCACATAATCCTTCCGTTGCTGCCTGCAGCGACGAGG
AAGCAGAACAAACAAGAAGATGATATGATATAGCGAATCCTTAATTCGCA
AGCCTTATCGACAACCAATACAGTCGTTCTCATGCCCCGTCGCCCCCAAT
ACCTAAACAGCAGGTTAAAGCAGCCAACAAGCCGCTTCACGCAGGGTTTT
TCGCCTGTCTTAGCCCCCTCAAACTCCAATCGACCTCCTCATCCCTCCAC
TTTCCCCTGTTACCATGGCTACTGGCACTGCCCCCTCCAAGCTGGATGAG
AATGCGCGCAGCAATGATGCCGCAACCAAAAgtacgtacgaaaagtgtgt
gggaggggtgcgcctgtttggttcggcgggtagagggcagggaaagaaat
gcgtggccttttccccctttggtagggcatgaccccctgcgacactttcc
ttcttgttactgctcggcatctttcttttccgctttcagctcttgttttt
cgtaagtgaagtttgttctctcatgtgtctgtggttgttaaatagtcatt
tgcttcgtggtggaaggtcttcccctctcctcctcctcatattcaccctt
tctccctctctccctccctcctctagATCTTACTGACGCCGGCGCCGCCG
CCGAGAACGCCGTGGCTTCTGCCTCTGCTGCCGCTTCCAATGAGATGACC
CCTCTCGTCACTCCCACCCCCCACCTGCTGCGCCAGCCCCAGACAAAAAG
TCCGCTGCCAAGCCCGCGCCTGCGTTCAAGAGCCCCCTTGCCGTGTCAGA
ACCGACGAAGGAAATGCTTGTCCCGGGTATCTTAGTCGTGGCGGCCTCGG
TCCTCTCCTGGACGGCAGGGAAGTACAACATGTCCGTGCTGGTGTCTTTG
GGGATAGGTTCGGTGGTGTACCTCTCCATCAAAACCCTCCGCGACCGCCT
CACCCGGGCCGCCACGATTTATGCAGATCGGAACGCGCAAAGGAAACGGG
TGATTGGCGACGAGGAAAGCGCGGAATGGATCAATACGGTCTTATGGCGA
TTTTGGCAGTTTTATGAGCCGGTGCTGTGTCAGAACCTTCGAGAAGCAAT
CCAGCCGGCCTTGGATGCCAACACACCCGCGGGACTCAAACGACTGGAGC
TGGGGAGGTTAACGCTGGGGAAGACCCCTCCATTCATCAGCTCCGCCCGG
CTGCTCTTGCGAGATAACCACCATAACGAAATAAGCGAGAGTCGTATTGT
CCTTAACTTGGGCCTTGGCTTCCATGCACCAGACCTGGAGGTGGTGGTGG
CCGCAAAGgtacgtcgttcctcccctccctccctccctccctccctctct
ccctccctctccccccccttcccacgttccacatcgcaaggcctcatttt
cgatctcattctcttcccctccgtcagACCGTTGCCGCCAGCCTCCCCTT
GGCCGTTAAAAACGTTTGGTTCGAAGGTATGCTCCGCGTTGAGATCGAGC
TCGTCCCGGACTTCCCCCATGCCAAAACCGTCCTCGTCACCTTCCTCGAC
AAGCCCATCATCGATTTCTCCGTCATCCCTCTCAAGAGCGTTAATATCTT
CGATTTGCCTGGCCTGTCGCAGTTTATCAGCAACCTCATCATCAACGGCA
TATgtacgtaccttcccaccctcccttcctccctccctccctccctccct
ccctctctctctccctccctccctccctccctccctccctccctttcaaa
attccgtttcttgggttccttcgtcatctccatgctctctttgcaccctc
ttttgtcattcctttgtatcgtactcctcagtctcttccaaacaatattc
ctaccacccactctcccttcctccctccctccctcccccctccctccccc
cctccctcccagCCGAGAACCTGGTGAATCCCGAGAAGCTCGTCATCGAT
TTGATTCCCGCAGAATGTGGACCCGTGGAGGCGGCCAAGGGTGTGCTCTT
CGTCTCGGTCGACAAGGCGATGTACAAGGgtagggagggagggagggagg
gagggagggagggagggagggagggaaggagggagggagcaagtgttcaa
ggttttgagacacacacatatagatacatacacacacatacacacgcata
aacacaaactcgtacatttatatattctttatgtgtagatatatcgcatc
tgatatgtatatattctctctatatagatacatagaatctctccaatcat
tcttacctaccgtgtattaagtacatttactataaactctctccaatcct
tctcacttatcttgtactaattaaatactaatatattatattgcattata
ttatattctattcactatcaacttctcctcgcagAGACGAACGCCTTGGA
CGTGATGAGCGTGGGTAGCTCGGAGGTCTATGCTGAGATCAAGgtaagca
ctccctccctccctccctccctccctccctccctccctccaggcgggggg
aaaacgtggtcaggactcacgctatcgacaatggcaagaacgttgacact
ccctgtctctccctcccatcctccctcccatcctccctccctccctccct
ccctccagGTGGGCAAGGACGTGGTGAGGACACAAGCCGTCTCTAACGGC
AAGGGCGAAGTTCTCTACGCCTTTGGGGGCGAAACGTTGGCCGTGCTAGT
CAAGGGAAATCTGGCTGCAGAGAAGGTGACGATTTATCTGCGTCAGCGCC
GTATGAGTGGACACCGGCTTCTGGGGAAGgtaaggagggagggagggagg
gagggagggagggagggcgggaggggcaacctatcttttagaacatctct
gccttttttttttcctctcacacgcactcccctctctcccttccttccct
cctttccacccttcttccctcagGTCTACGTCCCTGTCGCCGACATAGTC
AATTCGCCCAACAGCACCATCACTGAAACCCTCGACCTCGAGGCTGGAAA
CGGTAGTGTAACGGCCACCTTTGCCTTCAAGGCCCTGGCCAAGgtacgcc
cttccttctcctcttcttcttctctttccaccactttcattcaaattcac
tcaaattcaaacatttaaatttaaacagGTTAACGTCGAGGAAGGGGCCG
GTGGCGAGGAGGACGCCTCTGTCAGCACCACAGCCGAGAAGgtacgttga
ttacccctgtcgttcctccccttcctcctttccttcctccctccctaact
cctcctcttcgatctcaagctctttaacactattaggcgtacctaccact
gagcccctctcttcgtccctccctccctccctccctcccgccctcccgcc
ctcccatctcagGTTAGCGAGGTTGGCGATGATTCTACCAAGGCCGTTTC
GGTCGTTGCTCCGGCCATGAAATCCGTTGGGAGCACGGGGTCCTTGCTCG
TCCGCCTTCACCAGgtgctgagggagggagggagggagggagggagggag
ggagggagggagggagagagggggatgccttcaacggaacttcgccgatg
tggatctgacacttgtccctccctcccttcctcccttcctcccttcctcc
cttcctccctccctccctccctcccttagGGGCAGGACCTGGCGCCGAAG
GATTCTAACGGTTTCTCCGATCCGTTTGCCTCCCTTTTCTACACCAATAA
GTTGGTGGGTCAGACGCCTGTTTTCCCCAAAACACTCTCTCCCAAGTTTG
AGTGGAACAAGgtacgcccttcctccctccctccctcactccctctttcc
gtttcgattttccatgtcctactcgccgtgtccatcaattcccatcctcc
ctccctcattccctccctcccttcctccctccctccctcccttccctcct
ttctagGAGTACGTGGTGCAAGACATTGATCGCGTCCGCTTCACCCTCCG
AGTCTTCGACAAGGAGGAGATCGGATCGAGTGATGCCATGGGAGACCTCG
ATATCGACATGAAGGAAATCTTCCCCATCAAAAATCAAGgtgcgaagtcc
ctccctccttccccccgacctcgatccgtatctcttctccccgactttcc
acccaccctccctccctccctccttagGCACGGGCGAGCGTGACTTCGTC
GTCCTCAAGAAATGGATGCCACTGCGTGCTCCCGGGCCTGTCATTGAGAC
GACCAGGACAGCTGCCGACTTGAAGCGTCGAGCCCCTGCTAAGAAAGAGA
CTGgtacttacccttcctccctccctccctccctccctccctccctcctt
ccctccctccctccctccctccctccttccatcccgcctctctgttcttg
cctccttcccttcctgcttcctcccattcaccagcctctcggtccatcct
ccctccgtcatgctcttctatgtcaacttcaccgctcttcccccctccct
ctttcccttcctccctccagGCTTCGGCCATGTCCTCCTGTCGTTCATTT
TCCGTCCCACTGATATCCCTCCCGGCCTCAGCAATTTCCAGGCTGACCTG
GGCAATCCCGAGgtacgccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctcca
ggtgtattccctccctcctttcgtccctccctcccttgcaccattcccgg
cactcacatttctccctccttcctccccccctttccttcatcagGACGAC
CTCTCTCTAACCCCCTACCAGGGCAGCGCACTGGATGCCATCGGCTCAGG
CCTAGGAAAAGGTGTGGGGGCCATCGGGAGTAAGATCGGAGCTGTGGGTG
GTGGCGTCATTGGTGgtaggtccctccttcccttcctccctccaaatgct
tttattaagacacttttcatccctgccttcattttaatgtttccatctca
ctccctcgcaccaaaatcatacgactttgacacactctctttcccccctt
attctctctctgtcttgtgggccaagccgccgctactgtgacattttttg
gcctttcccctcatctcatttctttcctttttccggcgataaatcgcgct
atttagccccctctctacctctctcatttgtccctttccttcgcgccatt
tcccctgtcacgacagGCGTGGGCATGCTCGGTTCCGGCGTCGCCGACGG
CTTAACAGGCACGGCCAATCTTCTGgtgagcgactctctcgttttcattc
tccctccctccctccctcccccgctccctttcccactccctccctccctc
cctcccctcccctcccttcttccttttcttctacgtgcaaaacacgtaga
tgatagggatcgtatgcatgccagaaatttacaccctccctaccttcctt
tcttcctccattccctcacagGGAAACGGTCTAAAAGGCGCCGTTAATTT
AACGGGCAAGGGAGGCAATTCCATGGCCAAGCACATGAGCTCCTTCTCCG
CGGACGCTACCCCTCGTTCCAAGAAAGCCTTCTTCTCCAGGAGGAAGAGC
GGGGAGATGGACAGTAGCCGCTAAAGAGGGAGGGAGGGAGAGAGGGAGGA
AGAGAGGGAGGGAGGGTGTGCGTTGAGGCAGTCGAACGTATGGGGCGGAT
GGGAGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGAATGAAGCAAAGAGGG
GCGTGCGATATGCAGGAGCTGTAATGGCAGTAGCAGGGTGAACAGAAAAT
GCGAAGGATATAGCAGCGTTGACATCGATGTAGAGGGGGGGGAGGGGGGA
AACGATGAAAGAGGAGACAGAAACGAAGACGTAGAGGCGGGAAAGAAGGG
GAAAGAAGGGAGCTGAAGGAGGAGGAGGAGAGATAACGATGAAGTGGCAG
CATATACAGCCGCATTCGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGTA
GCGGTAGCAGCATCAAGGGACATTAAAAAGTGAATATTTTTGTTTTTGTT
TTATGGGAAATCTTCGACGGGGGCTAAAGACGTTCATCACGGGTACGCGA
GTCGCAGCAGCAGCAGTAGCAAGTGAGGAGAAGCAGCAGCAAGCAGACGA
AATACAGCAGCGTCTTTTACTCATCAAATTGCAAGCAATAAAATAAGAGG
GAACACAGGGGTAATCAATTTTATATAGGAAGGCTTTGAGAGCGAATGAT
CAAAGACCGCGACACGAAGAAGAGAGGCAGATGCTGGGGAGATATGAAAG
TAAAGACGACACATCGCGTCATGCAGTACAGCAGCAATAACAGCTCCCTG
TGGCAGCAACCGCCACCACAGCGGACTCACGTCGTCCGGTGGCTCTCGTC
GTATTCTCCTACTTGTTGCCTTTTCCTTCGCTAGTCATCCGTTCGTCAAG
CCCTCTCATTCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTTC
CTCTCTCCCGCCCTCCCTCCAAACTTCATGTCAATTAATTCCCTCCCCTT
CACCCAAACACACGCACAAAACCAAAACAAAAGAAACAGACGCACAACGG
TCAGACCGACAACCACCGTCCATCCTTCCCACCCTCCTTCCCTCCCTCCC
TCCCTCCCTCCC
back to top

protein sequence of NO11G00340.1

>NO11G00340.1-protein ID=NO11G00340.1-protein|Name=NO11G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=723bp
MLVPGILVVAASVLSWTAGKYNMSVLVSLGIGSVVYLSIKTLRDRLTRAA
TIYADRNAQRKRVIGDEESAEWINTVLWRFWQFYEPVLCQNLREAIQPAL
DANTPAGLKRLELGRLTLGKTPPFISSARLLLRDNHHNEISESRIVLNLG
LGFHAPDLEVVVAAKTVAASLPLAVKNVWFEGMLRVEIELVPDFPHAKTV
LVTFLDKPIIDFSVIPLKSVNIFDLPGLSQFISNLIINGISENLVNPEKL
VIDLIPAECGPVEAAKGVLFVSVDKAMYKETNALDVMSVGSSEVYAEIKV
GKDVVRTQAVSNGKGEVLYAFGGETLAVLVKGNLAAEKVTIYLRQRRMSG
HRLLGKVYVPVADIVNSPNSTITETLDLEAGNGSVTATFAFKALAKVNVE
EGAGGEEDASVSTTAEKVSEVGDDSTKAVSVVAPAMKSVGSTGSLLVRLH
QGQDLAPKDSNGFSDPFASLFYTNKLVGQTPVFPKTLSPKFEWNKEYVVQ
DIDRVRFTLRVFDKEEIGSSDAMGDLDIDMKEIFPIKNQGTGERDFVVLK
KWMPLRAPGPVIETTRTAADLKRRAPAKKETGFGHVLLSFIFRPTDIPPG
LSNFQADLGNPEDDLSLTPYQGSALDAIGSGLGKGVGAIGSKIGAVGGGV
IGGVGMLGSGVADGLTGTANLLGNGLKGAVNLTGKGGNSMAKHMSSFSAD
ATPRSKKAFFSRRKSGEMDSSR*
back to top
Synonyms
Publications