NO10G04110, NO10G04110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G04110 vs. NCBI_GenBank
Match: EWM25619.1 (putative membrane permease [Nannochloropsis gaditana]) HSP 1 Score: 411.0 bits (1055), Expect = 3.300e-111 Identity = 228/315 (72.38%), Postives = 256/315 (81.27%), Query Frame = 0 Query: 4 SPSATAAPGSSRLLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQAVFVLVGLAALCALHAAGKGCLARRATAAGGEGE--------GRKDEGSSASPAGMRTASQALLKP 311 S +P SRLL AN GAYILNI AT VIGT+G +GKTNSEVSAAYPTLFTPAG+AF+IWGLIF MEG FA+YQLLPSVRST A+QKGVGPWWILMVLLQLGWS SFATESI LSM FM+GIFLSLLALTLSLR+ L +PSL+Q+ICL+ PFSLNFGWITAA+LANANI+AVYRD + L SH+ATAVSSCVVLGLAA+LGGF L+DP+FCLVLVWAGTA+A++L+ PV SI+ASFPP VT GLSQAVFVLVG AAL ALHAAG+ L RR GEGE SPAG+R A+QALLKP Sbjct: 3 SSEPDTSPLGSRLLPWANLGAYILNIVATSVIGTSGKVGKTNSEVSAAYPTLFTPAGYAFSIWGLIFAMEGAFALYQLLPSVRSTPAIQKGVGPWWILMVLLQLGWSLSFATESIPLSMFFMVGIFLSLLALTLSLRRALPRRPSLAQSICLLLPFSLNFGWITAALLANANIVAVYRDSEDLASHLATAVSSCVVLGLAALLGGFRLVDPIFCLVLVWAGTAIAKQLSAPVASISASFPPPVTQGLSQAVFVLVGFAALAALHAAGRRVLLRR-----GEGEDTXXXXXXXXXXXXXXGSPAGVRAAAQALLKP 312
BLAST of NO10G04110 vs. NCBI_GenBank
Match: XP_005854496.1 (putative membrane permease [Nannochloropsis gaditana CCMP526] >EKU21868.1 putative membrane permease [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 408.7 bits (1049), Expect = 1.600e-110 Identity = 226/313 (72.20%), Postives = 256/313 (81.79%), Query Frame = 0 Query: 4 SPSATAAPGSSRLLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQAVFVLVGLAALCALHAAGKGCLARRATAAGGE------GEGRKDEGSSASPAGMRTASQALLKP 311 S +P SRLL AN GAY+LNI AT VIGT+G +GKTNSEVSAAYPTLFTPAG+AF+IWGLIF MEG FA+YQLLPSVRST A+QKGVGPWWILMVL+QLGWS SFATESI LSM FM+GIFLSLLALTLSLR+ L +PSL+Q+ICL+ PFSLNFGWITAA+LANANI+AVYRD + L SH+ATAVSSCVVLGLAA+LGGF L+DP+FCLVLVWAGTA+A+EL+ PV SI+ASFPP VT GLSQAVFVLVG AAL ALHAAG+ L RR GGE + SPAG+R A+QALLKP Sbjct: 3 SSEPDTSPLGSRLLPWANLGAYVLNIVATSVIGTSGKVGKTNSEVSAAYPTLFTPAGYAFSIWGLIFAMEGAFALYQLLPSVRSTPAIQKGVGPWWILMVLVQLGWSLSFATESIPLSMFFMVGIFLSLLALTLSLRQALPRRPSLAQSICLLLPFSLNFGWITAALLANANIVAVYRDSEDLASHLATAVSSCVVLGLAALLGGFRLVDPIFCLVLVWAGTAIAKELSAPVASISASFPPPVTQGLSQAVFVLVGFAALAALHAAGRRVLLRR---GGGEDTQXXXXXXXXXXXXTGSPAGVRAAAQALLKP 312
BLAST of NO10G04110 vs. NCBI_GenBank
Match: OLP98645.1 (hypothetical protein AK812_SmicGene18896 [Symbiodinium microadriaticum]) HSP 1 Score: 117.5 bits (293), Expect = 7.500e-23 Identity = 98/277 (35.38%), Postives = 139/277 (50.18%), Query Frame = 0 Query: 16 LLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLL----LDPVFCLVLVWAGTAVARELAEPVESIAAS-------FPPSVTDGLSQAVFVLVGLAALCALHAAGKGCLARRATAA 282 +L+L N A+++N+ TY TG G TNS +SA Y TL TP+G+AF+IWG IFI EGVFA+ Q+ PS R + V K + PWW+ L Q W+ FA E + +M M GI +SL+ L L + + S S+ L PFSL+ GWI AA N ++A Y P V A++ G+A ++ F DP+ LV WA + EL + + A+ +P V + F+ L+ LC + A C R AA Sbjct: 10 MLNLLNLAAFLVNLGITYG-SLTGAFGPTNSSLSAKYHTLITPSGFAFSIWGPIFIWEGVFAVAQMFPSYRGSMLV-KTITPWWLSACLFQCAWTLFFAQEIMIGAMTCMAGILVSLMVGILRLDFL--EEMSTSEYWLLRAPFSLHCGWIVAATSLNICVVADYYKG---PPEVMLALAMFCFAGIAVIVTVFTFASPKADPIIALVGCWALLGMVSELTDAEKLRDATVRWNYFDWPQYVISAVRITAFL---LSLLCIVAATDGTCGYIRRDAA 276
BLAST of NO10G04110 vs. NCBI_GenBank
Match: XP_002294518.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88352.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 117.1 bits (292), Expect = 9.800e-23 Identity = 95/267 (35.58%), Postives = 132/267 (49.44%), Query Frame = 0 Query: 3 SSPSATAAPGSSRLLSLANFGAYILNIAATYVIGTTGTIG-KTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVS--SCVVLGLAAVLGGFLLLDP--VFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLS-QAVFVLVGLAAL 264 S PS++ P ++ N A+I NI Y IG G IG TN E+S Y T+ TP AF+IW +I++ + +FAI QLLP R+ VQKGVG W L+V +Q+GW+F+FA E I S+ + SL + L FPF+++ GWITAA N N+ V + PS V AV S VL +V F + P VL WA + EL +P++ I +F G++ AV V G+ L Sbjct: 8 SRPSSSEPPARLNHKNILNLIAFIANIVLVYGIGNAGWIGTPTNGELSDKYQTIVTPNSSAFSIWAVIYVFQALFAIGQLLPKFRAVDMVQKGVGYWHCLVVTMQIGWTFTFAYEVIEASLYY------------------TESDGSLWEFWLLRFPFAIHGGWITAASALNVNVQVVSMEQ---PSDVQLAVGIISLAVLHAISVWVLFNIPRPNWTIACVLSWALGWIYNELQDPLDMIKDTFSADTISGVAYAAVAVAAGIIPL 253
BLAST of NO10G04110 vs. NCBI_GenBank
Match: OEU09141.1 (hypothetical protein FRACYDRAFT_264399 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 111.3 bits (277), Expect = 5.400e-21 Identity = 81/252 (32.14%), Postives = 132/252 (52.38%), Query Frame = 0 Query: 6 SATAAPGSSRLLSLANFGAYILNIAATYVIGTTGTIGK-TNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWI--LMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQAV 255 S+++ S + N AYI+N+ T+ IG G G+ N E+SA Y T+ TP G++F+IWG+IFI + ++ ++Q LPS R++ V K W+ +M + Q GW+ SF+ E + ++++ M GI ++L+ T SL+ K + + PFS+ GWI AA + N+ V + ++ + +++S V+LG A +D LV+VWA V EL EP I F G+ V Sbjct: 20 SSSSTNTSLNKFNWLNLLAYIVNVFVTFGIGIFGLTGQPDNGELSAKYQTIVTPFGFSFSIWGVIFIWQAIWVVWQFLPSQRNSEGVLKA---WYYYPIMTVFQAGWTISFSYEIMWVALLCMYGIVITLVMATRSLQSY---KKTWKGYLLWQGPFSIQTGWIMAAAVVMTNVFTVSYNANVTTQLIVSSLSLVVLLGTAFTYLSSYPVDFAIPLVIVWALGGVYAELQEPSTKITDQFTVEQISGVQYGV 265
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_075072840.1 (tryptophan-rich sensory protein [Longilinea arvoryzae] >GAP13507.1 TspO and MBR related protein [Longilinea arvoryzae]) HSP 1 Score: 107.5 bits (267), Expect = 7.800e-20 Identity = 81/225 (36.00%), Postives = 123/225 (54.67%), Query Frame = 0 Query: 24 AYILNIAATYVIGTTGTI----GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGG---FLLLDPVFCLVLVWAGTAVA-RELAEPVESIAA 241 A I+ + AT ++ I G ++S YPTLFTPAG+ FAIWGLI+++ V+ +YQ L + + + G W++L + + W F + LSM+ ML + SL+ + L P P LS+ + PFS+ GWI+ A +ANA IL D L +A + + +VLG+A +LGG FL D ++ LVL+WA +A R+ A+P+ S AA Sbjct: 9 AVIVFLLATVIVNALANIIPFNGLNTGQISNDYPTLFTPAGYVFAIWGLIYLLLLVYVVYQALAPQKDNPRL-RAAGGWFVLSCIANMAWLFCWHYLQFPLSMLAMLVLLGSLIMAYVRLEIGRSPAP-LSEQLLARAPFSIYLGWISVATIANAAILLTSLKWDGL--GLAPQIWTLIVLGVAVILGGLASFLRHDGLYGLVLMWAFAGIAVRQAADPLVSGAA 229
BLAST of NO10G04110 vs. NCBI_GenBank
Match: GAX20384.1 (hypothetical protein FisN_9Hh097 [Fistulifera solaris]) HSP 1 Score: 107.1 bits (266), Expect = 1.000e-19 Identity = 88/257 (34.24%), Postives = 129/257 (50.19%), Query Frame = 0 Query: 8 TAAPGSSRLLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQ-AVFVLVGLAAL 264 T S+ L N AYI N+A T+ IG + TN+E+S Y TL TP GWAFAIW LIF ++GV+ + +++ +G ++ +V+ Q GW+ SF+ E I SM+FM + S L T++ L P + + PF+L+ GWITAA L NAN++ VY P+ + A+ S + L AV D V L WA + REL+ P +I +F L Q A + + + AL Sbjct: 2 TTTTASNTSLPYWNLAAYIFNVAVTFGIGILRS--PTNAELSEKYQTLVTPVGWAFAIWSLIFTLQGVWVAWPFFSEKKTSI-----IGYRYVWIVIAQAGWTLSFSHERIVASMLFMTAL-ASFLWETVA---TLPPPATWKEYAVTHLPFTLHAGWITAATLVNANVVLVYLGV-AAPTQYSAALMSLLSLFALAVSEVLRDHDWVIPATLAWAAYGIHRELSSPKFAIRITFSERQIGHLQQGAAWATMTIVAL 246
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_076267817.1 (tryptophan-rich sensory protein [Paenibacillus sp. FSL A5-0031] >OME83911.1 hypothetical protein BK120_12370 [Paenibacillus sp. FSL A5-0031]) HSP 1 Score: 105.1 bits (261), Expect = 3.900e-19 Identity = 69/207 (33.33%), Postives = 111/207 (53.62%), Query Frame = 0 Query: 42 GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLP-SHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVA-RELAEPVESIAASFPPSV 247 GKT E+SA YP L TPA +AF+IW +I+++ F IYQ P + VQ +GPW+I+ L + W + E +T S+ M + +SL+ + ++RK P + Q + + PFS+ GWI A + NA ++ + + S A + + L AV+ GF DP F LV VW+ A+A ++ +P S++AS ++ Sbjct: 30 GKTTGEISAKYPVLITPAPYAFSIWSIIYLLLIGFVIYQFKPRAGKSKTVQ-NIGPWFIISCLFNVAWILLWHYEKLTSSVFIMFALLISLIVIYTAIRKNNQPPAPMEQWL-VRLPFSIYLGWICVASIVNAAVVLYAAEWNGFGLSDAAWTIILLIAASLLAVVIGFRFGDPAFVLVFVWSFIAIAVKQDQQPEVSLSASIAAAI 234
BLAST of NO10G04110 vs. NCBI_GenBank
Match: XP_002178437.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50102.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 104.4 bits (259), Expect = 6.600e-19 Identity = 81/251 (32.27%), Postives = 121/251 (48.21%), Query Frame = 0 Query: 17 LSLANFGAYILNIAATYVIGTTGTIG-KTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQAVFVLVGLAALCAL 267 L++ N AY LN+ TY IG G TN ++S Y TL TP GWAF+IWGLIF + V+ I+Q + + +G + + + Q W+ +F+ E+I LS+ FM+ I + L+ LSL + + S+ + PF+L+ GWI AA + N N++ V + +AV S L L V + +D V +V+ WA V EL SI SF S D ++ L L Sbjct: 17 LNIINLIAYTLNVLITYGIGVAGLFDLPTNGDLSRKYQTLVTPVGWAFSIWGLIFTFQLVWVIFQTVSKRNRNSEWISAIGMGYFRICVAQAAWTLAFSNEAIWLSLGFMVLILVFLVEAVLSL---IPKQASVGDYVLWKLPFTLHCGWILAATVVNLNVVLV-AEGFSTNIQFLSAVGSLASLFLIGVFTAWRHIDYVIPIVVAWALLGVYVELGSAAASIVISFERSQIDQARYGAIIVSSALILATL 263
BLAST of NO10G04110 vs. NCBI_GenBank
Match: GAX26831.1 (hypothetical protein FisN_9Lh097 [Fistulifera solaris]) HSP 1 Score: 102.4 bits (254), Expect = 2.500e-18 Identity = 82/245 (33.47%), Postives = 122/245 (49.80%), Query Frame = 0 Query: 21 NFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLV-FPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPP----SVTDGLSQAVFVLVGL 261 N AY +N+A T+ +G + TN+E+S Y TL TP GWAFAIW LIF ++ + + S + + +G ++ +V+ Q GW+ SF+ E I SM+FM + L +L P P+ + L PF+L+ GWI+AA L NAN++ VY P+ + A+ S + L AV D V L WA + REL+ P SI +FP + G + A +V L Sbjct: 15 NLAAYFVNVAITFGVGVGRS--PTNAELSEKYQTLVTPVGWAFAIWSLIFTLQAFWTAWPFCSSKKISV-----IGYRYVWIVMAQAGWTLSFSHERIVASMLFMTALASFLWETVATL-----PPPATWKEYALTHLPFTLHTGWISAATLVNANVVLVYLGV-AAPTQYSAALLSLLSLFGLAVSEVVRDHDWVIPATLAWAAYGIHRELSSPKLSIRITFPERQIVQLQQGAAWATMTIVAL 246 The following BLAST results are available for this feature:
BLAST of NO10G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G04110 ID=NO10G04110|Name=NO10G04110|organism=Nannochloropsis oceanica|type=gene|length=1397bpback to top protein sequence of NO10G04110.1 >NO10G04110.1-protein ID=NO10G04110.1-protein|Name=NO10G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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