NO10G03390, NO10G03390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03390 vs. NCBI_GenBank
Match: EWM25557.1 (eukaryotic translation initiation factor 4e [Nannochloropsis gaditana]) HSP 1 Score: 319.7 bits (818), Expect = 8.700e-84 Identity = 154/236 (65.25%), Postives = 180/236 (76.27%), Query Frame = 0 Query: 1 MENGT--------SSSGGPEVEHPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEGLGEGGRDGGKIPEFVWKEHSQIVNTGLEGYGGST 229 M+NGT S+ G +HPLQQPWQLYLHYPT+TQ+LESYGKEAYQALCEFSTVEGFW YF+ LP+PSD+FTE+V GS P QL +RKLDGKNLEAFGLFKKGVKPEWED LN++GGHWECRR+ FDLP+LD+MW +TV+ALIGETLEDG+ ITGARVVDK + KR EYRLE+WT+ KE VN+ IR +P+FVWK+HS+ V T EGY GST Sbjct: 41 MDNGTXXXXXXXXXSTNGQ--DHPLQQPWQLYLHYPTVTQALESYGKEAYQALCEFSTVEGFWTYFYHLPKPSDVFTEMVPGSQPAQLSRRKLDGKNLEAFGLFKKGVKPEWEDALNLKGGHWECRRD--FDLPSLDRMWTSTVLALIGETLEDGSVITGARVVDKCKFKRAEYRLELWTSTKEAGVNDEIRXXXXXXXXXXXXXXXXXXXXVPDFVWKDHSESVVTASEGYSGST 272
BLAST of NO10G03390 vs. NCBI_GenBank
Match: XP_005761801.1 (hypothetical protein EMIHUDRAFT_414699 [Emiliania huxleyi CCMP1516] >EOD09372.1 hypothetical protein EMIHUDRAFT_414699 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.8 bits (351), Expect = 1.200e-29 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 0 Query: 11 PEVEHPLQQPWQLYLH-YPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEG 195 P H L+ W ++ H P +S E + LCE +TVE FW ++ +P+PS+IF + ++K + +EAF +FKK +KPEWEDP N G W CRR AF +P LD+ W V+ +IGETL+ G+ I GARVVDKS N R YRLE+W ++ +++ + K+ EAL +G Sbjct: 4 PAGPHFLESEWVIWEHRAPDKNKSYE----DNMAKLCEVATVEDFWRAWNNIPKPSEIFYD--------GRTRKKFASRTVEAFSVFKKNIKPEWEDPANRSGAEWYCRR--AFTMPQLDEFWLHIVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKNDDALSKELLAKMQEALGKG 174
BLAST of NO10G03390 vs. NCBI_GenBank
Match: OEU14111.1 (translation initiation factor eIF4e [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 139.0 bits (349), Expect = 2.100e-29 Identity = 83/220 (37.73%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 12 EVEHPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDG---KNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETL----------EDGNA----ITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEGLGEGGRDGGKIPEFVWKEHS 215 E HPLQ W ++ H KE + L E STVE FW YF +P+PS++F + RK+ G K +E + LFKKG++PEW DP N+ GG W CR+ +L LD W+ VM+ +GET+ EDG++ + GARVVDKSR+ P Y+LE+W ++ + E I+ KLIE + +G R P+F W++HS Sbjct: 3 EETHPLQNEWVMWEHKANQGSKDPDKWKENMKQLYESSTVEDFWRYFQHVPKPSEVFFDGDC---------RKMVGPEAKTIEEYSLFKKGIEPEWGDPQNLTGGEWFCRQ--FLELEVLDLYWQNLVMSCVGETIDDDVAGDDDAEDGSSLLSYVNGARVVDKSRH-YPLYKLELWINTRDPVIKERIKNKLIEIITDGQPVTKR---LQPKFDWRDHS 207
BLAST of NO10G03390 vs. NCBI_GenBank
Match: CBN73980.1 (eukaryotic translation initiation factor 4E-like 1 [Ectocarpus siliculosus]) HSP 1 Score: 137.9 bits (346), Expect = 4.700e-29 Identity = 75/208 (36.06%), Postives = 118/208 (56.73%), Query Frame = 0 Query: 7 SSGGPEVEHPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEG-IRMKLIEALKEGLGEGGRDGGKIPEFVWKEH 214 ++G E HPLQ W ++ H + +S +G ++ Q+L EF+TVE FW ++ +P+PS + + GS +++K+ + ++++ +FKKG+KPEWE P N GG W+ R + LD W V+ L+GET++ G+ I GARVVDKS+N YR E+W R N+G +L+E L+ L + +P F WK H Sbjct: 2 ANGSAEQLHPLQNTWCIWEH--KVAKSSADWG-DSMQSLAEFATVEDFWKVYNNVPKPSQVMFD---GS-----MRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSK--MTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWL-----RSNDGNTAARLLERLRACLADRNLHEKLMPSFDWKAH 191
BLAST of NO10G03390 vs. NCBI_GenBank
Match: GBG26563.1 (Eukaryotic translation initiation factor 4E [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 137.5 bits (345), Expect = 6.100e-29 Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 0 Query: 15 HPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEGLGEGGRDGGKIPEFVWKEHSQIVNT----GLEGYGGST 229 HPLQ W + H T S YG + +Q L EF TVE FW + + LP+PS++F Y PQ +K + ++ F +FK G++PEWED NM GG + CR+ A LD W ++ L+GET+++G+ I G RVVDKS++ RP YRLE+W +++ V E +R ++ + L L + E++ EH+ +NT +G GST Sbjct: 11 HPLQNTWAFWEHRKGGTGS--DYGSKMFQ-LGEFETVEDFWRFKNNLPQPSEVF-------YTPQSGHKKFVDREIDGFSMFKGGIRPEWEDKANMYGGEFFCRQTMA--PAQLDNAWEKLLLGLVGETIDNGDEICGVRVVDKSKSNRPTYRLEMWFRSRDKDVLEHLRTQVQKCLGANL---------LKEYM--EHNVAMNTHGAGAPKGRSGST 205
BLAST of NO10G03390 vs. NCBI_GenBank
Match: XP_002178545.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50210.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 135.2 bits (339), Expect = 3.000e-28 Identity = 77/207 (37.20%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 14 EHPLQQPWQLYLHYPT-ITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDG-----NAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEGLGEGGRDGGKIPEFVWKEHS 215 ++PLQ W L+ H + KE QALC F TVE FW YF+ +P+PS +F + K +GK +E + LFK+G++PEW DP N+ GG + CR F+ LD W+ V AL+GET+ED + + G RVVDKSR P ++LE+W ++ + E ++ L++ + E G+ G+ P+F WK+HS Sbjct: 8 DNPLQNEWVLWEHKAAGAGNKNPNQWKENMQALCSFRTVEDFWQYFNHIPKPSQVFFDGECRK------KVGPEGKTIEEYSLFKEGIEPEWGDPKNVIGGEFFCR--AYFEADILDLYWQNLVFALVGETIEDALGGKQDCVNGVRVVDKSRG-YPMFKLELWVNTRDPILKEKMKDLLLDLMTE--GQPASIKGR-PKFEWKDHS 202
BLAST of NO10G03390 vs. NCBI_GenBank
Match: OQR98512.1 (hypothetical protein ACHHYP_08439 [Achlya hypogyna]) HSP 1 Score: 130.2 bits (326), Expect = 9.800e-27 Identity = 64/201 (31.84%), Postives = 111/201 (55.22%), Query Frame = 0 Query: 15 HPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWE--CRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEGLGEGGRDGGKIPEFVWKEH 214 HPLQ W ++ + +S + + LC FS+VE FW Y++ +P+PS + + +A K+K +++++F +FK+G++PEWED NM GG W+ R +P LD++W V+ +IGET++ N ITGARVV K++ YR E+W ++ + + IR ++ + + +G + + +KEH Sbjct: 6 HPLQSAWSIW----ELRESTKGNYGDNLHRLCTFSSVEEFWGYWNNIPKPSQVLNDGIA--------KKKFSDRSVQSFAVFKEGIRPEWEDSANMNGGEWQLSIRLQPG----PLDELWDKVVLGMIGETIDPTNEITGARVVHKNKKDTHTYRFELWLRSRDRNLADEIRKNMVACMNQ---DGSSQKVVVSDCSYKEH 187
BLAST of NO10G03390 vs. NCBI_GenBank
Match: XP_005768015.1 (hypothetical protein EMIHUDRAFT_470522 [Emiliania huxleyi CCMP1516] >EOD15586.1 hypothetical protein EMIHUDRAFT_470522 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 129.8 bits (325), Expect = 1.300e-26 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 0 Query: 49 STVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKEG 195 +TVE FW ++ +P+PS+IF + ++K + +EAF +FKK +KPEWEDP N G W CRR AF +P LD+ W V+ +IGETL+ G+ I GARVVDKS N R YRLE+W ++ +++ + K+ EAL +G Sbjct: 463 ATVEDFWRAWNNIPKPSEIFYD--------GRTRKKFASRTVEAFSVFKKNIKPEWEDPANRSGAEWYCRR--AFTMPQLDEFWLHIVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKNDDALSKELLAKMQEALGKG 598
BLAST of NO10G03390 vs. NCBI_GenBank
Match: XP_012194421.1 (hypothetical protein SPRG_00815 [Saprolegnia parasitica CBS 223.65] >KDO34754.1 hypothetical protein SPRG_00815 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 125.2 bits (313), Expect = 3.100e-25 Identity = 59/183 (32.24%), Postives = 103/183 (56.28%), Query Frame = 0 Query: 11 PEVEHPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKE 194 P H L+ W ++ S +YG+ ++ LC FSTVE FW Y++ +P+PS + + V +K+K +++++F +FK+G++PEWED NM GG W+ + LD++W V+ +IGET++ N +TGARVV K++ YR E+W ++ + + IR ++ + + Sbjct: 5 PTETHALESAWSIW-ELRDSGSSKSNYGENLHR-LCTFSTVEEFWGYWNNIPKPSQVLNDGV--------VKKKFTDRSVQSFAVFKEGIRPEWEDSANMSGGEWQLSIK--LQAGPLDELWDKLVLGMIGETIDPTNEVTGARVVHKNKKDSHSYRFELWLRSRDRNLADEIRKNMVACMNQ 175
BLAST of NO10G03390 vs. NCBI_GenBank
Match: XP_008605222.1 (hypothetical protein SDRG_01475 [Saprolegnia diclina VS20] >EQC41508.1 hypothetical protein SDRG_01475 [Saprolegnia diclina VS20]) HSP 1 Score: 124.8 bits (312), Expect = 4.100e-25 Identity = 59/183 (32.24%), Postives = 101/183 (55.19%), Query Frame = 0 Query: 11 PEVEHPLQQPWQLYLHYPTITQSLESYGKEAYQALCEFSTVEGFWAYFHFLPRPSDIFTEVVAGSYPPQLLKRKLDGKNLEAFGLFKKGVKPEWEDPLNMQGGHWECRREPAFDLPTLDKMWRTTVMALIGETLEDGNAITGARVVDKSRNKRPEYRLEIWTAVKEERVNEGIRMKLIEALKE 194 P H L+ W ++ + +S +S E LC FS VE FW Y++ +P+PS + + V +K+K +++++F +FK+G++PEWED NM GG W+ + LD++W V+ +IGET++ N +TGARVV K++ YR E+W ++ + + IR ++ L + Sbjct: 5 PTETHALESAWSIW----ELRESSKSNYGENLHRLCTFSNVEEFWGYWNNIPKPSQVLNDGV--------VKKKFTDRSVQSFAVFKEGIRPEWEDSANMSGGEWQLSIK--LQAGPLDELWDKLVLGMIGETIDPTNEVTGARVVHKNKKDSHSYRFELWLRSRDRNLADEIRKNMVACLNQ 173 The following BLAST results are available for this feature:
BLAST of NO10G03390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03390 ID=NO10G03390|Name=NO10G03390|organism=Nannochloropsis oceanica|type=gene|length=1065bpback to top protein sequence of NO10G03390.1 >NO10G03390.1-protein ID=NO10G03390.1-protein|Name=NO10G03390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bpback to top Synonyms
Publications
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