NO10G02730, NO10G02730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02730 vs. NCBI_GenBank
Match: EWM25487.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana]) HSP 1 Score: 469.5 bits (1207), Expect = 1.300e-128 Identity = 286/469 (60.98%), Postives = 320/469 (68.23%), Query Frame = 0 Query: 1 MTTETTGTAVAELSVEEPVKEVEAPAAPTTTAAVPATPTAEGPADEAKVNEVAP----VENPPVKXXXXXXXXXXXXXXXXXXXK-EEVPAALAAPAPAA------PLTAAQTSELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAVEWKTHPVASLGGKTNVILRVRQYERDYKSKLSS--GGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVCDFDLPENFEKELAALVPRHVKFTGIKPGTLYYELREFFNKYGQVKYVSYVADSNVALIKFLLPETAAKFLGEGEKREVSEVVFKEEKLVAEAPTEEEVREQLLAKNARKRSNLENRGQ 457 MT ET AVA L + KE A T + P TPT +GPAD A+ +E A VEN + E ALA A LT A +++K+LM+FYFGAANWRRDKFLQGEAAKDPEGYVPLTV L NKLKKLT+D A+VV+ALE+ P S+LL+L DK AVKRTV AT E G DDSD+RTLFVDGIPK+P DGA EVTVDDIV+IFKALGPVDFVRLSRDKTSKKLTGAAFVEFP VADAQ+ LAVEWK+ P+ +LGGKTNVILRVRQYERDYK+K+++ GGA V DF+LPENFEKELA LVPRHVKFTGIK GT YYELREFFNKYG VKYV+Y DS+VAL+KFL ETAAKFL G+ EVS+VVFKEEKL APTE EVREQL AKNARKRSNLE RGQ Sbjct: 62 MTAET--EAVAALETPQSTKE----EANVTAVSAPETPTTQGPADNAREDESASVNVNVENEAAGDASKREDAAASCPSATTTGEAESAETALADSVVTATTTTPGTLTDALANDIKSLMEFYFGAANWRRDKFLQGEAAKDPEGYVPLTVFLKCNKLKKLTSDPAVVVQALEREPVSSLLSLRGDKAAVKRTVVLALATEGEEG---KDDSDRRTLFVDGIPKIPVDGAKEVTVDDIVAIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPNVADAQRVLAVEWKSRPIPTLGGKTNVILRVRQYERDYKNKVAAAQGGA---------TVGSKRKTPEGDGGEEKKGGVYDFELPENFEKELATLVPRHVKFTGIKSGTQYYELREFFNKYGAVKYVTYQPDSDVALVKFLTAETAAKFL--GDTPEVSDVVFKEEKLGVVAPTEAEVREQLTAKNARKRSNLEARGQ 510
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_002613707.1 (hypothetical protein BRAFLDRAFT_271338 [Branchiostoma floridae] >EEN69716.1 hypothetical protein BRAFLDRAFT_271338, partial [Branchiostoma floridae]) HSP 1 Score: 99.8 bits (247), Expect = 2.600e-17 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 0 Query: 109 MDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAVEWKTHPVASLGGKTNVILRVRQ 294 M+FYF AN RD+FL+ E K+ EG++ L+V+L+FNK+K+LT+D +VVK L +S LL N +KT V+RT A D+RT++V+ +P+ VT + I + F G V ++ L R KTS G AF+EF +A+K A + +P + GK V + R+ Sbjct: 40 MEFYFSDANLHRDRFLKKEMEKEKEGWIDLSVILSFNKMKQLTSDPKMVVKCLR---NSELLQANTEKTKVRRTKPL----------AEPVQMDERTVYVECLPRT-------VTHEWIKTTFSVCGKVAYISLPRFKTSGDTKGFAFIEFEKQEEAEK--ACKMLNNPPDHMVGKMGVFPKTRK 202
BLAST of NO10G02730 vs. NCBI_GenBank
Match: AFK10709.1 (La protein-like protein [Callorhinchus milii]) HSP 1 Score: 99.0 bits (245), Expect = 4.500e-17 Identity = 64/169 (37.87%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 103 SELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAV 272 SE+K ++F+FG N +D+FLQ + K +GY+ L+VL +FNK+KKLTTD ++ +AL+ +S ++ LN + T ++R A GD D ++RT++V+ +PK + G I +F G V +V + R KTS G AFVEF T+ AQKA+ V Sbjct: 28 SEIKKQVEFWFGDVNLHKDRFLQEQLQKSRDGYIDLSVLTSFNKMKKLTTDVKLMARALK---NSEVIELNVEGTKIRRRQAL--------GD-RPQDVEERTVYVELLPKNVSHGW-------IDRVFSKCGNVVYVSIPRYKTSGDPKGFAFVEFETITQAQKAIEV 177
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_007895201.1 (PREDICTED: la-related protein 7 [Callorhinchus milii]) HSP 1 Score: 99.0 bits (245), Expect = 4.500e-17 Identity = 64/169 (37.87%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 103 SELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAV 272 SE+K ++F+FG N +D+FLQ + K +GY+ L+VL +FNK+KKLTTD ++ +AL+ +S ++ LN + T ++R A GD D ++RT++V+ +PK + G I +F G V +V + R KTS G AFVEF T+ AQKA+ V Sbjct: 36 SEIKKQVEFWFGDVNLHKDRFLQEQLQKSRDGYIDLSVLTSFNKMKKLTTDVKLMARALK---NSEVIELNVEGTKIRRRQAL--------GD-RPQDVEERTVYVELLPKNVSHGW-------IDRVFSKCGNVVYVSIPRYKTSGDPKGFAFVEFETITQAQKAIEV 185
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_019644772.1 (PREDICTED: la-related protein 7-like [Branchiostoma belcheri]) HSP 1 Score: 99.0 bits (245), Expect = 4.500e-17 Identity = 65/185 (35.14%), Postives = 104/185 (56.22%), Query Frame = 0 Query: 109 MDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAVEWKTHPVASLGGKTNVILRVRQ 294 M+FYF AN RD+FL+ E K+ EG++ L+V+L+FNK+K+LT+D +VVK+L +S L+ +NA+KT V+RT A D+RT++V+ +P+ VT + I + F G V ++ L R +T+ G AF+EF +A+K A + +P + GK V + R+ Sbjct: 40 MEFYFSDANLHRDRFLKKEMEKEKEGWIDLSVILSFNKMKQLTSDPKMVVKSLR---NSELVQVNAEKTKVRRTKPL----------AEPVQMDERTVYVECLPRA-------VTHEWIRTTFSVCGKVTYISLPRYQTTGDPKGFAFIEFEKQEEAEK--ACKMLNNPPDHMAGKMGVFPKTRK 202
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_020377209.1 (la-related protein 7 [Rhincodon typus]) HSP 1 Score: 97.4 bits (241), Expect = 1.300e-16 Identity = 60/167 (35.93%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 103 SELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKAL 270 SE+K ++F+FG N +D+FLQ + K +GYV ++VL FNK+KKLTTD ++ +AL+ +S ++ LN + T ++R VA D D RT++V+ +P+ + G I +F +G V ++ + R KT+ G AFVEF T + AQKA+ Sbjct: 36 SEIKKQVEFWFGDVNLHKDRFLQEQIQKSRDGYVDISVLTAFNKMKKLTTDVKLIARALK---NSNIIELNIEGTKLRRRVAL---------GVQPQDVDDRTVYVELLPRNVSHGW-------IDRVFSKIGNVVYISIPRYKTTGDPKGFAFVEFETASGAQKAI 183
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_004335846.1 (RNA binding motif containing protein [Acanthamoeba castellanii str. Neff] >ELR13833.1 RNA binding motif containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 93.2 bits (230), Expect = 2.400e-15 Identity = 63/193 (32.64%), Postives = 104/193 (53.89%), Query Frame = 0 Query: 83 EVPAALAAPAPAAPLTAAQTSE-----LKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALA 271 E P A P+A +T E +K +++YF +N+RRDK+LQ EAAK+PEG++ + + F +L+ +TTD +VV+ + S LT++ D VKR+ +PA D+S +T+FV G+P+ + T+D + ++F G V + + R++ +KK G A VEF T ++ A A Sbjct: 18 EAPKVEATGEPSAKKAKVETEEITPAKIKKQIEYYFSDSNYRRDKWLQEEAAKNPEGFIEIAKIAAFPRLQAMTTDLNVVVELMRS---SDRLTVSEDGLLVKRS-QPLPAV---------DNSHLKTVFVKGLPE-------DATIDSVEAVFSQFGAVARIIIFRERETKKAKGEACVEFETEEGSKAAAA 190
BLAST of NO10G02730 vs. NCBI_GenBank
Match: PFX28815.1 (La-related protein 7 [Stylophora pistillata]) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-15 Identity = 56/169 (33.14%), Postives = 97/169 (57.40%), Query Frame = 0 Query: 103 SELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAV 272 ++L+ ++FYFG +N ++D+F++ E +K PEGYVP+ + +FN++K++T D +VVKA++ S++L +N D T V+R +P + DK T++V+ +P D + IF G V++V + R K + + G AFVEF + AQ+A+ V Sbjct: 62 AQLQEQVEFYFGDSNLQKDRFMKQEISKHPEGYVPIPTIASFNRMKQITDDLNLVVKAMKL---SSMLEVNGDDTMVRRN-TPVP---------EPQNVDKETIYVERLPPYADH-------DWVKGIFSKYGKVEYVSIPRFKHTGDIKGFAFVEFESAKVAQEAVEV 210
BLAST of NO10G02730 vs. NCBI_GenBank
Match: XP_022785306.1 (la-related protein 7-like [Stylophora pistillata] >XP_022785308.1 la-related protein 7-like [Stylophora pistillata] >XP_022785309.1 la-related protein 7-like [Stylophora pistillata] >XP_022785310.1 la-related protein 7-like [Stylophora pistillata]) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-15 Identity = 56/169 (33.14%), Postives = 97/169 (57.40%), Query Frame = 0 Query: 103 SELKALMDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAV 272 ++L+ ++FYFG +N ++D+F++ E +K PEGYVP+ + +FN++K++T D +VVKA++ S++L +N D T V+R +P + DK T++V+ +P D + IF G V++V + R K + + G AFVEF + AQ+A+ V Sbjct: 28 AQLQEQVEFYFGDSNLQKDRFMKQEISKHPEGYVPIPTIASFNRMKQITDDLNLVVKAMKL---SSMLEVNGDDTMVRRN-TPVP---------EPQNVDKETIYVERLPPYADH-------DWVKGIFSKYGKVEYVSIPRFKHTGDIKGFAFVEFESAKVAQEAVEV 176
BLAST of NO10G02730 vs. NCBI_GenBank
Match: PVD39030.1 (hypothetical protein C0Q70_01657 [Pomacea canaliculata]) HSP 1 Score: 92.4 bits (228), Expect = 4.200e-15 Identity = 67/186 (36.02%), Postives = 100/186 (53.76%), Query Frame = 0 Query: 109 MDFYFGAANWRRDKFLQGEAAKDPEGYVPLTVLLTFNKLKKLTTDSAIVVKALEQAPHSTLLTLNADKTAVKRTVASIPATGAEGGDAASDDSDKRTLFVDGIPKVPTDGAAEVTVDDIVSIFKALGPVDFVRLSRDKTSKKLTGAAFVEFPTVADAQKALAV-------EWKTHPVASLGGKTNV 288 M+FYFG AN +D+F++ P+GY+PL++ L F K+ KLT+ I+ KAL + S LL ++ DKT V+RT T E D+RT++V+G+P TD D + F + G V +V L R +T+ + G AFVEF T A+A KA+ E + H VA++ N+ Sbjct: 44 MEFYFGDANINKDRFMKQHLDNAPDGYLPLSLFLKFAKILKLTSSVEIMAKALRK---SDLLEVSEDKTKVRRTRPVHYMTEKE--------VDERTVYVEGLPP-STDH------DWVSQCFSSCGKVAYVSLPRYRTTGDIKGFAFVEFETPAEAAKAIEKMNYTPEREEELHKVANIKPSKNL 211 The following BLAST results are available for this feature:
BLAST of NO10G02730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02730 ID=NO10G02730|Name=NO10G02730|organism=Nannochloropsis oceanica|type=gene|length=1497bpback to top protein sequence of NO10G02730.1 >NO10G02730.1-protein ID=NO10G02730.1-protein|Name=NO10G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bpback to top Synonyms
Publications
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