NO10G01740, NO10G01740 (gene) Nannochloropsis oceanica

Overview
NameNO10G01740
Unique NameNO10G01740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1484
Alignment locationchr10:484902..486385 -

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Properties
Property NameValue
DescriptionSubfamily member 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:484902..486385 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR001623DnaJ_domain
Homology
BLAST of NO10G01740 vs. NCBI_GenBank
Match: EWM25343.1 (subfamily member 9 [Nannochloropsis gaditana])

HSP 1 Score: 260.4 bits (664), Expect = 7.100e-66
Identity = 130/173 (75.14%), Postives = 147/173 (84.97%), Query Frame = 0
Query:    1 MSSPQAQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            M++PQAQ+ +AFG KKTLYEIL V  DA  AVIRKAYFKMALTCHPDKCP+DP A ARFQALSI+HATLSD DKRR+YDETGE+ SED EL QSEQEWY+YWR LFPTVTV+KI +F+ EY+ SEEE  DVLKAY+E QGKMS VID+VMLATD+DE RFR+MIE AI  K V
Sbjct:    7 MTTPQAQVAKAFGKKKTLYEILDVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDADKRRNYDETGEIGSEDAELNQSEQEWYDYWRALFPTVTVEKIDRFKEEYRESEEEARDVLKAYEEAQGKMSLVIDSVMLATDEDEGRFRKMIEEAIVNKRV 179          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: OQS05185.1 (hypothetical protein THRCLA_02636 [Thraustotheca clavata])

HSP 1 Score: 157.1 bits (396), Expect = 8.500e-35
Identity = 86/173 (49.71%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    1 MSSPQAQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            M++   +I Q FG ++ LY ILGV    T + ++ AY K AL  HPDK PDDP A  +FQ L  IH++LS+ D R  YDETGE+E E  E   S ++W EYWR LFP VTV  I+ F+  Y+ SEEE  DVLKAY++ +GKM  ++D +ML+T+ D ERF ++I+ AI A+EV
Sbjct:    1 MTTTMEKIEQHFG-ERDLYAILGVKKTCTASELKTAYRKTALKFHPDKNPDDPEATTKFQLLCTIHSSLSNPDLRAVYDETGELEVEATE-TASFKDWLEYWRALFPKVTVKDIENFETSYRDSEEEAQDVLKAYEKYKGKMQSILDVIMLSTENDIERFSDIIQRAIDAEEV 171          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: XP_008606265.1 (hypothetical protein SDRG_02454 [Saprolegnia diclina VS20] >EQC40566.1 hypothetical protein SDRG_02454 [Saprolegnia diclina VS20])

HSP 1 Score: 152.9 bits (385), Expect = 1.600e-33
Identity = 84/172 (48.84%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    2 SSPQAQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            SS    +  +FG ++ LY ILGV A AT A ++ AY K AL  HPDK PDD  A  +FQ L  IHA LS  + R  YDETGE+E+E  E   S ++W +YWR LFP VT   I+ F+ EY+GS+EE  DVL AY++ +GK + ++D VML++D D +RF ++I+ AI A EV
Sbjct:    3 SSTMDAVEASFG-QRDLYAILGVEASATTAQLKTAYRKKALKYHPDKNPDDDEATTKFQLLCTIHAALSSPELRAVYDETGELETEATE-TSSFRDWVDYWRNLFPKVTTKDIQSFEQEYRGSDEEARDVLNAYEKYKGKWTSIMDVVMLSSDDDMDRFSKIIQEAIDANEV 172          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: XP_012199045.1 (hypothetical protein SPRG_19792 [Saprolegnia parasitica CBS 223.65] >KDO30237.1 hypothetical protein SPRG_19792 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 150.2 bits (378), Expect = 1.000e-32
Identity = 83/172 (48.26%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    2 SSPQAQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            SS    +  +FG ++ LY ILGV A AT A ++ AY K AL  HPDK PDD  A  +FQ L  IHA LS+ + R  Y+ETGE+E+E  E   S ++W +YWR LFP VT   I+ F+  Y+ S+EE  DVL+AY++ +GKM  ++D VML+TD D +RF ++I+ AI A EV
Sbjct:    3 SSTMDAVEASFG-QRDLYAILGVKASATPAQLKTAYRKKALKYHPDKNPDDDDATTKFQLLCTIHAALSNPELRAVYEETGELETEATE-TSSFRDWVDYWRNLFPKVTTKDIQSFEKTYRESDEEAQDVLQAYEKYKGKMQSILDVVMLSTDDDIDRFTKIIQDAIDANEV 172          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: ACO09955.1 (DnaJ homolog subfamily C member 9 [Osmerus mordax])

HSP 1 Score: 148.7 bits (374), Expect = 3.000e-32
Identity = 72/167 (43.11%), Postives = 113/167 (67.66%), Query Frame = 0
Query:    7 QINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            Q  + F T   LYE++GV  DA+ A +R+ Y+K++LT HPD+ P+D  A  +FQAL  ++A LSD D+R  YDE G V+ E   + Q+ + W EYWR +FP +T+  I  F+  Y+ ++EEK D+ + Y+E QG M+ ++++V+ AT +DE RFR++++GAI A E+
Sbjct:    6 QCQELFKT-SNLYEVIGVTKDASEAEVRRGYYKISLTVHPDRAPEDEQATVKFQALGKVYAVLSDKDQRAIYDEQGIVDEESDSIDQN-RNWEEYWRTMFPKITLQDILDFEKSYKYTDEEKQDLKRVYEESQGDMNKIMESVLCATQEDEGRFRDILQGAIDAGEL 170          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: OQR95221.1 (hypothetical protein ACHHYP_00208 [Achlya hypogyna])

HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 0
Query:   12 FGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            FGT + LY +LGV   AT + ++ AY K AL  HPDK PDD  A  +FQ L  IH+ LS+ + R  YDETGE+E+E  E   S ++W +YWR LFP VT   I+ F+  Y+GS+EE  DVL AY++ +GKM  ++D +ML+TD D +RF E+I+ AI A EV
Sbjct:   15 FGT-RDLYAVLGVKDTATESELKTAYRKKALKFHPDKNPDDAEATTKFQLLCTIHSALSNPELRAVYDETGELETEATE-TASFRDWLDYWRMLFPKVTEKDIQSFETSYRGSDEEAQDVLNAYQKYKGKMQSILDVIMLSTDNDIDRFAEIIQEAIDADEV 174          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: XP_009516741.1 (hypothetical protein PHYSODRAFT_353667 [Phytophthora sojae] >EGZ29466.1 hypothetical protein PHYSODRAFT_353667 [Phytophthora sojae])

HSP 1 Score: 146.0 bits (367), Expect = 1.900e-31
Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    6 AQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPG----ANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQ-SEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            A I+  FG    LY +LGV   AT   I +AY K+AL  HPDK   D      A A+FQA+S IH+ LSD + R  YDE+G + S+D + K  S Q W +Y+  +FP VT + I +F+GEY+ S+EE+ DVL AY + +GKM  V+D +ML+TD DEERF EMI+ A+  KEV
Sbjct:    4 ALIHAEFGDDCDLYAVLGVERSATDKEITRAYRKLALKYHPDKQRGDEAARAKATAKFQAVSAIHSILSDKEARAVYDESGTILSDDHDDKSPSFQMWTQYFARVFPKVTTEDIARFEGEYRHSDEERRDVLDAYTKYEGKMKHVMDTIMLSTDDDEERFAEMIQKAVKEKEV 176          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: POM75796.1 (Chaperone protein dnaJ 6 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 143.3 bits (360), Expect = 1.300e-30
Identity = 82/173 (47.40%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    6 AQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPG----ANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQ-SEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            A I+  FG    LY +LGV   AT   I +AY K+AL  HPDK   D      A A+FQA+S IH+ LSD + R  YDE+G + S+D + K  S Q W +Y+  +FP V+ + I +F+GEY+ S+EEK DVL AY + +G+M  ++D +ML+TD DEERF EMI+ AI  KEV
Sbjct:    4 ALIHGEFGEDCDLYAVLGVERSATGKEITRAYRKLALKFHPDKQRGDEASRAKATAKFQAVSAIHSILSDTEARAVYDESGTILSDDHDEKSPSFQMWTQYFARVFPKVSKEDITRFEGEYRHSDEEKRDVLAAYTKYEGEMQHIMDTIMLSTDDDEERFAEMIQKAIKEKEV 176          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: ETI34735.1 (hypothetical protein F443_18806 [Phytophthora parasitica P1569] >ETK75063.1 hypothetical protein L915_18274 [Phytophthora parasitica] >ETL28484.1 hypothetical protein L916_18183 [Phytophthora parasitica] >ETM34945.1 hypothetical protein L914_18081 [Phytophthora parasitica] >ETP04587.1 hypothetical protein F441_18658 [Phytophthora parasitica CJ01A1] >ETP32753.1 hypothetical protein F442_18617 [Phytophthora parasitica P10297] >KUF82240.1 DnaJ subfamily C member 9 [Phytophthora nicotianae])

HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30
Identity = 82/173 (47.40%), Postives = 110/173 (63.58%), Query Frame = 0
Query:    6 AQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANA----RFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQ-SEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            A I+  FG    LY + GV   AT   I +AY K+AL  HPDK   D  + A    RFQA+S IH+ LSD + R  YDE+G + S+D + K  S Q W +Y+  +FP VT + I +F+GEY+ S+EEK DVL AY + +G+M  ++D +ML+TD DEERF EMI+ AI AK V
Sbjct:    4 ALIHAEFGDDCDLYAVFGVERSATDKEITRAYRKLALKFHPDKQRGDEASRAKATGRFQAVSAIHSILSDKEARAVYDESGTILSDDHDDKSPSFQMWTQYFARVFPKVTKEDITRFEGEYRHSDEEKRDVLAAYTKYEGEMQHIMDTIMLSTDDDEERFVEMIQNAIKAKGV 176          
BLAST of NO10G01740 vs. NCBI_GenBank
Match: ETL81739.1 (hypothetical protein L917_17998 [Phytophthora parasitica])

HSP 1 Score: 142.5 bits (358), Expect = 2.200e-30
Identity = 82/173 (47.40%), Postives = 110/173 (63.58%), Query Frame = 0
Query:    6 AQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCPDDPGANA----RFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQ-SEQEWYEYWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVMLATDQDEERFREMIEGAIAAKEV 174
            A I+  FG    LY + GV   AT   I +AY K+AL  HPDK   D  + A    RFQA+S IH+ LSD + R  YDE+G + S+D + K  S Q W +Y+  +FP VT + I +F+GEY+ S+EEK DVL AY + +G+M  ++D +ML+TD DEERF EMI+ AI AK V
Sbjct:    4 ALIHAEFGDDCDLYAVFGVERSATDKEITRAYRKLALKFHPDKQRGDEASRAKATGRFQAVSAIHSILSDKEARAVYDESGTILSDDHDDKSPSFQMWTQYFARVFPKVTKEDITRFEGEYRHSDEEKRDVLAAYTKYEGEMQHIMDTIMLSTDDDEERFVEMIQNAIKAKGV 176          
The following BLAST results are available for this feature:
BLAST of NO10G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25343.17.100e-6675.14subfamily member 9 [Nannochloropsis gaditana][more]
OQS05185.18.500e-3549.71hypothetical protein THRCLA_02636 [Thraustotheca c... [more]
XP_008606265.11.600e-3348.84hypothetical protein SDRG_02454 [Saprolegnia dicli... [more]
XP_012199045.11.000e-3248.26hypothetical protein SPRG_19792 [Saprolegnia paras... [more]
ACO09955.13.000e-3243.11DnaJ homolog subfamily C member 9 [Osmerus mordax][more]
OQR95221.11.500e-3149.38hypothetical protein ACHHYP_00208 [Achlya hypogyna... [more]
XP_009516741.11.900e-3147.98hypothetical protein PHYSODRAFT_353667 [Phytophtho... [more]
POM75796.11.300e-3047.40Chaperone protein dnaJ 6 [Phytophthora palmivora v... [more]
ETI34735.12.200e-3047.40hypothetical protein F443_18806 [Phytophthora para... [more]
ETL81739.12.200e-3047.40hypothetical protein L917_17998 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001045NSK001045Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01740.1NO10G01740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586269gene_4040Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DNJC9gene5107Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01740.1NO10G01740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01740 ID=NO10G01740|Name=NO10G01740|organism=Nannochloropsis oceanica|type=gene|length=1484bp
ATGTCCAGCCCCCAAGCCCAGATCAACCAAGCCTTTGGCACAAAGAAGAC
ACTCTACGAGATCCTCGGCGTGCCTGCGGATGCTACGGTTGCTGTTATTA
GGAAGGCCTACTTTAAGATGGCCTTGACTTGTgtgagtatgggggaatga
gcttggagcgaaggagggagtgggtgtaaaaatggtgtagcgtgccttgc
ctccgtctcgtaaaattgctctttggcgaaaaggttgttcccactgattg
cgtgcaagtgacagaggagaagatggttgccgctctggtatcaaatgatc
gcctcgctccactgctccccgtgctttctgattttgccgaagcgggacga
acactattattttcgtttaaaaacaaacccataatattttgcctgccttt
ttctcttccgccgatagttcaatgtcatatgtcacacttatcccccccct
cctttgccaaacacacagCATCCGGACAAGTGCCCGGACGACCCCGGGGC
CAATGCTCGCTTTCAAGCCCTCTCAATTATCCACGCCACCCTCAGCGACG
ACGACAAGCGTCGGAGCTACGACGAGACGGGAGAAGTTGAATCGGAAGAC
GTTGAACTGAAACAAAGCGAGCAGGAATGGTATGAGTACTGGCGGGAGCT
TTTCCCCACGGTGACGGTAGACAAGATCAAAAAGTTTCAAGGGGAGTATC
AAGGGAGCGAGGAAGAAAAGGGAGACGTGCTGAAGGCCTACAAGGAGGGC
CAAGGAAAGATGAGTTGGGTGATTGATAATGTGATGCTGGCGACGGATCA
GGACGAGGAACGCTTTCGGGAGATGATTGAGGGTGCCATCGCGGCCAAGG
AAGTGAAGCGACTCAAGGGCTTCAAGGCGGACGTCCTGAAGGACGCCAAG
CGGAAGAAGCGGGCAGAAAAGgtcagaatagacggtgggagaggtgttgg
gatataaagtcgcaagtatatgctttggtcaccacaagtcaagagagctg
cgtcattaggggcgcaatgacgaacctcttgtgacctctgttcttgctgg
atcgcctctcgcggctgaaggctgatgccccgaaagtgttgtcctctcaa
catctctccgtcaccccctctctccttttctttcttccctttgatccgca
gGAGGCCAAAGAAGCCGAAGAGCTGCTGCGTGCCATCCACGCAAAGCGGG
GTGTGAACGCCCTTGCCACAATGGCTACAGACAGGAGGAATCAAATGTCC
AGTTTTTACGATTCTCTGGAGGAAAAGTACGGAAAGAAGGGCGGCAATGG
TGGCGGAGATGGAGAGAATGGTAGGGCGCGGATTGGGAAGAAGAGGAAGG
CGAAGAAGGAAGAAGAGGAGGGGGGGGAAGAGAAGGACATTGACGATGAG
GAGTTTGAACGGATTCGAGCTTCGTTGGGGAGGAATGAGAAAGTGGCCGC
AGCGGGGAGAAGGAGTGATAAGATGAGCGAATGA
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protein sequence of NO10G01740.1

>NO10G01740.1-protein ID=NO10G01740.1-protein|Name=NO10G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MSSPQAQINQAFGTKKTLYEILGVPADATVAVIRKAYFKMALTCHPDKCP
DDPGANARFQALSIIHATLSDDDKRRSYDETGEVESEDVELKQSEQEWYE
YWRELFPTVTVDKIKKFQGEYQGSEEEKGDVLKAYKEGQGKMSWVIDNVM
LATDQDEERFREMIEGAIAAKEVKRLKGFKADVLKDAKRKKRAEKEAKEA
EELLRAIHAKRGVNALATMATDRRNQMSSFYDSLEEKYGKKGGNGGGDGE
NGRARIGKKRKAKKEEEEGGEEKDIDDEEFERIRASLGRNEKVAAAGRRS
DKMSE*
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Synonyms
Publications