NO10G01460, NO10G01460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO10G01460 vs. NCBI_GenBank
Match: EWM25467.1 (hypothetical protein Naga_100005g106 [Nannochloropsis gaditana]) HSP 1 Score: 248.1 bits (632), Expect = 2.400e-62 Identity = 136/196 (69.39%), Postives = 152/196 (77.55%), Query Frame = 0 Query: 7 LFAALSFQASAFLLPPSLPSSR-DAVVLSAARTNDAVSSRQQHIGISLRSLSLAGLGTAVVLARDMAPANAKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVLPEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAPL 202 LFA L F A AF P++ SR + VL A S+RQQH+ + +SL LAGLGT +A APANA K EYLKEPTPEFE MQKRAM FE+ ALEKK+VWKDKYAVLP+AKTE ELV ALDGLT FVL ERGLPVGIK Q LVSDIRKVKRAGK+AKIWNK AEISYE+LIY+INY+QSPNT+RDLT PL Sbjct: 59 LFAILPFPACAFFTAPAVTQSRVGSTVLRAIHEVHDFSTRQQHLSSTFQSLVLAGLGTTAGIALSTAPANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 254
BLAST of NO10G01460 vs. NCBI_GenBank
Match: XP_005852586.1 (hypothetical protein NGA_0714200 [Nannochloropsis gaditana CCMP526] >EKU23249.1 hypothetical protein NGA_0714200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 212.2 bits (539), Expect = 1.500e-51 Identity = 108/130 (83.08%), Postives = 116/130 (89.23%), Query Frame = 0 Query: 72 APANAKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVLPEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAPL 202 APANA K EYLKEPTPEFE MQKRAM FE+ ALEKK+VWKDKYAVLP+AKTE ELV ALDGLT FVL ERGLPVGIK Q LVSDIRKVKRAGK+AKIWNK AEISYE+LIY+INY+QSPNT+RDLT PL Sbjct: 4 APANAATKVEYLKEPTPEFEEMQKRAMAFERAALEKKKVWKDKYAVLPQAKTEQELVAALDGLTKFVLEERGLPVGIKMQTLVSDIRKVKRAGKDAKIWNKEAEISYEKLIYAINYQQSPNTSRDLTNPL 133
BLAST of NO10G01460 vs. NCBI_GenBank
Match: XP_002294117.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88472.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.5 bits (197), Expect = 6.600e-12 Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 82 YLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVL-PEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAPL 202 YL EPT EF+ +++ MEF K L K + A L E+ TE+ELV+ L L V+ GLP+GIKK+ D+ KV R K W N EI+Y++L I Y+QSPNT +DL PL Sbjct: 87 YLTEPTEEFKESERQRMEFRKKQLLLKGGFVKVLARLTSESNTEEELVRDLSELKELVIQTGGLPLGIKKE----DMYKVIRGKKAKGNWPTNVEIAYQKLKSEIAYQQSPNTEKDLENPL 203
BLAST of NO10G01460 vs. NCBI_GenBank
Match: EJK74246.1 (hypothetical protein THAOC_04086 [Thalassiosira oceanica]) HSP 1 Score: 77.8 bits (190), Expect = 4.300e-11 Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 0 Query: 72 APANAKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVL-PEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAPL 202 +PA A E YL EPT EF+ +++ +EF + L K + A L E+ TE++L+ L+ L V+ GLP+GIKK+ + IR K G W N EI+Y+ L I Y+QSPNT +DL PL Sbjct: 58 SPALALE--TYLTEPTEEFKESERQRLEFRRKQLALKGEFVKVIARLTTESTTEEQLIGDLEELRGLVVKTGGLPIGIKKEEMYKVIRSKKAKG----FWPTNVEIAYQGLKSEIRYQQSPNTEKDLENPL 182
BLAST of NO10G01460 vs. NCBI_GenBank
Match: XP_002184653.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43712.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10 Identity = 45/126 (35.71%), Postives = 74/126 (58.73%), Query Frame = 0 Query: 79 KPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWK---DKYAVLPEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAPL 202 +P++L+EPT +F+ +++A EF++ AL++K+ ++ D++ E E L LD L V GLP GI K+ V IR +R ++ + W EI+Y+ L+ I Y+QSPNT RD+ P+ Sbjct: 90 RPKWLEEPTEDFKRNEQKATEFKRAALQRKQEFQAILDRFQ--EEPNDETILASDLDDLRRRVKQNGGLPQGISKEDTVKQIR--RRKARKPRYWPTQVEIAYQDLVSEILYQQSPNTDRDMDNPM 211
BLAST of NO10G01460 vs. NCBI_GenBank
Match: OEU13391.1 (hypothetical protein FRACYDRAFT_269797 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-9 Identity = 63/196 (32.14%), Postives = 93/196 (47.45%), Query Frame = 0 Query: 11 LSFQASAFLLPPSLPSSRDAVVLSAARTNDAVSSRQ-QHIGISLRS--------LSLAGLGTAVVLARDMAPANAKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKY-AVLPEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARD 197 + + S +L +PSS + + TN S+R H+ +S S AG+ + VLA A A+ +P YL EPT EF+ + + M F++ L K+ + L EA D LVK L L ++ GLP+GIKK L IR K G W AE++Y+ LI I ++QSPN ++ Sbjct: 1 MKYSTSLAVLLAVMPSSVYSFT-APTNTNSCQSTRSCSHVSLSANRREILETAVASAAGIASFFVLAPPQ-EAMAEARPMYLSEPTDEFKENEAKGMAFKREQLAVKKEFNAALDTFLNEANDSDALVKDLKDLQNLIVKAAGLPLGIKKDDLFKQIRSKKGKG----FWPVPAEVAYQSLIGEIRFQQSPNLDKE 190
BLAST of NO10G01460 vs. NCBI_GenBank
Match: GAX19582.1 (hypothetical protein FisN_19Hh160 [Fistulifera solaris]) HSP 1 Score: 67.4 bits (163), Expect = 5.800e-8 Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 76 AKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVL-PEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNT 194 A ++P YL EPT EF +K+A +F++ L+ K + L + E L LD L V GLP+GI K+ +V +R+ K K W N EI+Y+ L+ I Y+QSPNT Sbjct: 84 APKRPTYLAEPTEEFRQNEKKASDFKREQLKVKGQFMALLQKLQDDPNDETTLANDLDELRRLVRKGGGLPLGITKEEVVKQVRR----RKARKFWPVNVEIAYQDLLAEIAYQQSPNT 198
BLAST of NO10G01460 vs. NCBI_GenBank
Match: GAX09693.1 (hypothetical protein FisN_19Lh160 [Fistulifera solaris]) HSP 1 Score: 66.6 bits (161), Expect = 9.900e-8 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 76 AKEKPEYLKEPTPEFEAMQKRAMEFEKLALEKKRVWKDKYAVL-PEAKTEDELVKALDGLTAFVLAERGLPVGIKKQALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNT 194 A ++P YL EPT EF +K+A +F++ L+ K + L + E L LD L V GLP+GI K +V +R+ K K W N EI+Y+ L+ I Y+QSPNT Sbjct: 85 APKRPTYLAEPTEEFRQNEKKASDFKREQLKVKGQFTALLQKLQDDPNDETTLANDLDELRRLVRKGGGLPLGITKDEVVKQVRR----RKARKFWPVNVEIAYQDLLAEIAYQQSPNT 199 The following BLAST results are available for this feature:
BLAST of NO10G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01460 ID=NO10G01460|Name=NO10G01460|organism=Nannochloropsis oceanica|type=gene|length=912bpback to top protein sequence of NO10G01460.1 >NO10G01460.1-protein ID=NO10G01460.1-protein|Name=NO10G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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