NO10G01320, NO10G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01320 vs. NCBI_GenBank
Match: EWM25349.1 (transcription factor iiic-gamma subunit [Nannochloropsis gaditana]) HSP 1 Score: 994.6 bits (2570), Expect = 3.300e-286 Identity = 594/1085 (54.75%), Postives = 689/1085 (63.50%), Query Frame = 0 Query: 401 MRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLREGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQELALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGG-----------QGEVVELLGEVAMAYMDTGKYFRALEILRRLDGSKSXXXXXXXXXXXXXXXXGLSEKARIRVKLQMARSYLALNQFKGAATTLAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMYGDVQREVVVLQATTARGLKHRPTMLSCLSRLTKELENLLAHHRQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSEHHLLIGASSKPAPAKKRGRP-PFRPPLMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLRRVDPEVTELEMFLEYGLLCREVGRHEDSTSVILALVELAVFQSKSDFRRSRKNKGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTKKRAAAPAANATATAPVVSIPGQGG------------LSTTAASATSLPTRNSHQMDIPLLLPRPWDQTTFQSALQKHLHSHFARTEIVSRLGEHKLFLAARSLIRACIDTHGMIKEAGSISRTLVQRKHLLTEDHARELHEYTLLHAVNEDDYSSAIKSSIVSLSSHPTCLERGNALNRLVRKASRADANRAVIRRMAHKTPHSLPLALLSGNAFAISRNYQMALDKFLGAHRLAPTEPLVTLAAGALLMRVLSHRKLVDRHGCLVKCLGFLDKYVQLRREQGVEEEVLKEEGREGGVPPAVT--------------VAAAGKAMEQEVVFNMGRAFHQAGLLHMAVPFYQDALKMFDAHGELWKRGLGDKGHVTREAAWNLVVIYTGSKNREMARGLVERYLRV 1448 MRAEYREALRLLNEV+RQAPTVPDPYQ MGQIYEDQGE+QKAAEINLVG QFGPKDA LWKKTGQMFLELG FYLKAQYCFGRAIKL+R+DVEAIADRAHVQSLWG+VDKA+ GYEA+LRL+P QPEQFLLRLAEDCLRE RFWEKG+ ALSEVLCRVMGALFV KQI FLP++ A R+VP+RKME YEA+S L RHLMGLKRY DAA+VVQALHLFIAKLRER TRF ESE+QQ+LALP+DLV+R+GICQL+LDKL SALQ F+ALRQ +++ GG QGEV LL EVA A+MDTGK+FRALEILRRLD S L R+RVKLQMAR +ALNQ GAA+ L QI + V+REVVVLQA TARGLK +M +CL+R +EL + + EH G A +++ G P P RP XXXX E+ VD TE E+FLEYGLLCR +GR +D SV+L LVE+AVFQSKSDFRRSR+N+GAV A + GQG S + +S + Q +I LLPR W +T FQ AL++HL H +R E+++ LGE K++ AAR+LI+AC+++ ++EAGS++R LVQRKHLLTE+H RELHEY L HAVNEDDYSSAIKS IVSLS+ PT +ERGNALNRLVRKA+RADANRAVIRRMAHKTP SLPLALLSGNAFA+SRNYQMALDKFLGA+R+AP+EPLVTLAA ALLMRVLSHRKLV RHGCLVKCL FL++Y +LR QGVEE+VLK E +GG V A +A+EQEVV+NMGRAFHQAGLLHMAVPFYQDAL +FD + E R + KGHVTREAAWNLV IY + RE+AR +V RYLR+ Sbjct: 1 MRAEYREALRLLNEVVRQAPTVPDPYQTMGQIYEDQGEIQKAAEINLVGCQFGPKDARLWKKTGQMFLELGRPFYLKAQYCFGRAIKLDRQDVEAIADRAHVQSLWGRVDKAVLGYEAVLRLNPSQPEQFLLRLAEDCLREARFWEKGLEALSEVLCRVMGALFVAKQIKFLPVKAAAARHVPSRKMEAAYEAASTLCRHLMGLKRYADAAAVVQALHLFIAKLRERPTRFAEESEEQQQLALPVDLVVRFGICQLYLDKLTSALQCFSALRQADSASENSSGGGNLAXXXXXXXQGEVAGLLEEVAQAFMDTGKFFRALEILRRLDRGGSAGAGIGQRRAETT----LPRPGRLRVKLQMARCLVALNQLTGAASVLDQIEGVHGEGTSGKGLGGAKGTTRGGREGTKG------------------LRAPVRREVVVLQAATARGLKEPASMAACLARTARELAEICEEGQGKEAGAEEGAEGDV------------------EHGGGTGDVPGTASSREGGPPGPSRP--------CARLVEGGGADTGGTTSVEGIDVTGQRELEGERXXXXEGEVTCSVDARTTEFELFLEYGLLCRALGRDQDFFSVVLTLVEMAVFQSKSDFRRSRRNRGAVEEEEADWEGERQPVEGGEVNEGRQGGKISERDQVEGERRRGPIETAGXXXXXXXXXDKADAGQGAHEGGSLLAHAQDSSALSGPVSSKSPPHQSQSEIAELLPRTWPRTPFQVALERHLKVHASRVEVLTWLGEPKVYEAARALIQACVES-ARVREAGSLARVLVQRKHLLTEEHGRELHEYALSHAVNEDDYSSAIKSCIVSLSALPTSIERGNALNRLVRKATRADANRAVIRRMAHKTPESLPLALLSGNAFALSRNYQMALDKFLGAYRMAPSEPLVTLAAAALLMRVLSHRKLVARHGCLVKCLAFLEQYARLRLVQGVEEDVLKREAGDGGGMEDSNGAHGRDMEERGERLVKGATRALEQEVVYNMGRAFHQAGLLHMAVPFYQDALTIFDRYQE-ELRTVDGKGHVTREAAWNLVCIYKEGECRELARLVVGRYLRM 1035
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_005989558.1 (PREDICTED: general transcription factor 3C polypeptide 3 isoform X3 [Latimeria chalumnae]) HSP 1 Score: 119.4 bits (298), Expect = 9.200e-23 Identity = 86/341 (25.22%), Postives = 150/341 (43.99%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQEL-------ALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E +A+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W K +M LE D +A +C+ +AIK + +V + +R+++ G+ A+ GY IL L PP + ++LA D + E +G + E L + G + V+ I AE Y+ N K+Y A ++ + + + EK E+ ++P+D+ ++ +C +HL L L + E+ +L +VA A+++ G+Y AL +L L Sbjct: 147 LPRALRGLMGEANIRFARGEKEDAITMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDIEEWLKLAEMSLE--QDNIKQAIFCYSKAIKYDPTNVHYLWERSNLYEQVGEHKLAMDGYRRILNLLPPSEGEHFMQLARDMAKSYYEVNDLSSAIGVMEEALNKHQGLVAVE------DINMAAELYISN--------------------KQYDKALEIITQFSEIVLERDSAEQETSEAKEKGGEVYKCQIPESVPVDIRVKLMVCLIHLHILRPLDSLLTGLLEQNPE---------EMGDLYLDVAEAFLEIGEYNSALPLLSAL 450
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_005989560.1 (PREDICTED: general transcription factor 3C polypeptide 3 isoform X4 [Latimeria chalumnae]) HSP 1 Score: 119.4 bits (298), Expect = 9.200e-23 Identity = 86/341 (25.22%), Postives = 150/341 (43.99%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQEL-------ALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E +A+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W K +M LE D +A +C+ +AIK + +V + +R+++ G+ A+ GY IL L PP + ++LA D + E +G + E L + G + V+ I AE Y+ N K+Y A ++ + + + EK E+ ++P+D+ ++ +C +HL L L + E+ +L +VA A+++ G+Y AL +L L Sbjct: 147 LPRALRGLMGEANIRFARGEKEDAITMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDIEEWLKLAEMSLE--QDNIKQAIFCYSKAIKYDPTNVHYLWERSNLYEQVGEHKLAMDGYRRILNLLPPSEGEHFMQLARDMAKSYYEVNDLSSAIGVMEEALNKHQGLVAVE------DINMAAELYISN--------------------KQYDKALEIITQFSEIVLERDSAEQETSEAKEKGGEVYKCQIPESVPVDIRVKLMVCLIHLHILRPLDSLLTGLLEQNPE---------EMGDLYLDVAEAFLEIGEYNSALPLLSAL 450
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_014340255.1 (PREDICTED: general transcription factor 3C polypeptide 3 isoform X1 [Latimeria chalumnae]) HSP 1 Score: 119.4 bits (298), Expect = 9.200e-23 Identity = 86/341 (25.22%), Postives = 150/341 (43.99%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQEL-------ALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E +A+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W K +M LE D +A +C+ +AIK + +V + +R+++ G+ A+ GY IL L PP + ++LA D + E +G + E L + G + V+ I AE Y+ N K+Y A ++ + + + EK E+ ++P+D+ ++ +C +HL L L + E+ +L +VA A+++ G+Y AL +L L Sbjct: 147 LPRALRGLMGEANIRFARGEKEDAITMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDIEEWLKLAEMSLE--QDNIKQAIFCYSKAIKYDPTNVHYLWERSNLYEQVGEHKLAMDGYRRILNLLPPSEGEHFMQLARDMAKSYYEVNDLSSAIGVMEEALNKHQGLVAVE------DINMAAELYISN--------------------KQYDKALEIITQFSEIVLERDSAEQETSEAKEKGGEVYKCQIPESVPVDIRVKLMVCLIHLHILRPLDSLLTGLLEQNPE---------EMGDLYLDVAEAFLEIGEYNSALPLLSAL 450
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_014340256.1 (PREDICTED: general transcription factor 3C polypeptide 3 isoform X2 [Latimeria chalumnae]) HSP 1 Score: 119.4 bits (298), Expect = 9.200e-23 Identity = 86/341 (25.22%), Postives = 150/341 (43.99%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQEL-------ALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E +A+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W K +M LE D +A +C+ +AIK + +V + +R+++ G+ A+ GY IL L PP + ++LA D + E +G + E L + G + V+ I AE Y+ N K+Y A ++ + + + EK E+ ++P+D+ ++ +C +HL L L + E+ +L +VA A+++ G+Y AL +L L Sbjct: 147 LPRALRGLMGEANIRFARGEKEDAITMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDIEEWLKLAEMSLE--QDNIKQAIFCYSKAIKYDPTNVHYLWERSNLYEQVGEHKLAMDGYRRILNLLPPSEGEHFMQLARDMAKSYYEVNDLSSAIGVMEEALNKHQGLVAVE------DINMAAELYISN--------------------KQYDKALEIITQFSEIVLERDSAEQETSEAKEKGGEVYKCQIPESVPVDIRVKLMVCLIHLHILRPLDSLLTGLLEQNPE---------EMGDLYLDVAEAFLEIGEYNSALPLLSAL 450
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_018432472.1 (PREDICTED: general transcription factor 3C polypeptide 3 [Nanorana parkeri]) HSP 1 Score: 116.7 bits (291), Expect = 6.000e-22 Identity = 83/332 (25.00%), Postives = 151/332 (45.48%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLREGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLK-RYGDAASVVQALHLFIAKLRERQTRFDVESEKQQELALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E EA+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W + +M LE D +A +C+ +A+K N +V + +R+ + G+ A+ GY IL L P + ++LA D + ++E A + V+ A Q + + AE Y+ N + Y+ + ++ G+ + S + + + + E LP+D+ ++ +C +HL+ L + +L + EV +L +VA A+++ G+Y AL +L L Sbjct: 97 LPRALRGLMGEANIRFARGEREEAIMMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLE--QDNIKQAIFCYSKALKYNPTNVRYLWERSSLYEQMGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKS--YYETNDVASAIVIIEEAFAKH-QNLVAIEDVNIAAELYISNNQ----YDKALEVITQFSGITLNKKETTSTEEGSEIVMCHVPE---------------GLPIDITVKMMLCLIHLNILETVGPMLTSLMEQNPE---------EVGDLYLDVAEAFLEVGEYNSALPLLGAL 395
BLAST of NO10G01320 vs. NCBI_GenBank
Match: PIO40726.1 (hypothetical protein AB205_0032920 [Rana catesbeiana]) HSP 1 Score: 116.7 bits (291), Expect = 6.000e-22 Identity = 84/332 (25.30%), Postives = 151/332 (45.48%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLREGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLK-RYGDAASVVQALHLFIAKLRERQTRFDVESEKQQELALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E EA+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P D W + +M LE D +A +C+ +A+K N +V + +R+ + G+ A+ GY IL L P + ++LA D + ++E A + V+ + Q + + AE Y+ N + Y+ + ++ G+ + AS + + I ++ E +P+D+ ++ +C +HL+ L +L + EV +L +VA Y+D G+Y AL +L L Sbjct: 10 LPRALRGLMGEANIRFARGEREEAIMMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLE--QDNIKQAIFCYSKALKYNPTNVRYLWERSSLYEQVGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKS--YYETNDVASAIVIIEEAFSKH-QNLVAIEDVNIAAELYISNNQ----YDKALEVITQFSGITLNKKETASPEDSSEIVICRVPE---------------GVPIDITVKMMLCLIHLNILEPVGPMLTSLMEQNPE---------EVGDLYLDVAEGYIDIGEYNSALPLLSAL 308
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_002941839.2 (PREDICTED: general transcription factor 3C polypeptide 3 [Xenopus tropicalis] >OCA39693.1 hypothetical protein XENTR_v90007120mg [Xenopus tropicalis]) HSP 1 Score: 116.3 bits (290), Expect = 7.800e-22 Identity = 81/334 (24.25%), Postives = 149/334 (44.61%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQELALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP+ L + GEA + R E EA+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P + W + +M LE D +A +C+G+A++ N +V + +R+ + G+ A+ GY IL L P + ++LA D + E +G + E L + Q + + AE Y+ N++ Y+ + ++ G+ V+ + + + + +P+D+ ++ +C +HL+ L L + EV +L +VA A++D G+Y AL +L L Sbjct: 143 LPKVLRGLMGEANIRFARGESEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLE--QDNIKQAIFCYGKALRYNPTNVRFLWERSSLYEQIGEHKLAMDGYRRILNLLSPTDGERFMQLARDMAKTYYETNDIASAIGTIEEALSK------HQNLVAIEDVNIAAELYLSNKQ----YDKALDVITQFSGITLSKSETDVLNSAESVVCHIPD---------------GVPIDITVKMMLCLIHLNILEPVYPLLTFLMEQNPE---------EVGDLYLDVAEAFLDVGEYNSALPLLSAL 440
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_018110397.1 (PREDICTED: general transcription factor 3C polypeptide 3-like [Xenopus laevis] >OCT86295.1 hypothetical protein XELAEV_18019987mg [Xenopus laevis]) HSP 1 Score: 116.3 bits (290), Expect = 7.800e-22 Identity = 79/334 (23.65%), Postives = 149/334 (44.61%), Query Frame = 0 Query: 385 LPESLSRVYGEAQRHYMRAEYREALRLLNEVIRQAPTVPDPYQMMGQIYEDQGELQKAAEINLVGGQFGPKDAALWKKTGQMFLELGPDFYLKAQYCFGRAIKLNRKDVEAIADRAHVQSLWGKVDKAIAGYEAILRLSPPQPEQFLLRLAEDCLR---EGRFWEKGMGALSEVLCRVMGALFVQKQIGFLPIRPKAERYVPNRKMEVGYEASSVLVRHLMGLKRYGDAASVVQALHLFIAKLRERQTRFDVESEKQQELALPLDLVIRYGICQLHLDKLASALQSFAALRQMETSGGAGQGGQGEVVELLGEVAMAYMDTGKYFRALEILRRL 716 LP +L + GEA + R E +A+ + E+IRQAP +P+ + IYEDQG+++K+ + L+ P + W + +M LE D +A +C+G+A+K N ++ + +R+ + G+ A+ GY IL L P + ++LA D + E +G + E L + Q + + AE Y+ N++ Y+ + ++ G+ ++ + + + + +P+D+ ++ +C +HL+ L L + EV +L +VA A++D G+Y AL +L L Sbjct: 147 LPRALRGLMGEANIRFARGESEDAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLE--QDNIKQAIFCYGKALKYNPTNIRYLWERSSLYEQIGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKSYYETNDIASAIGTIEEALAK------HQNLVAIEDVNIAAELYISNKQ----YDKALDVITQFSGITLSKSDTGLLDSAESVVCNMPD---------------GVPIDISVKMMLCLIHLNILEPVYPLLTFLMEQNPE---------EVGDLYLDVAEAFLDAGEYNSALPLLSAL 444
BLAST of NO10G01320 vs. NCBI_GenBank
Match: XP_005853454.1 (transcription factor iiic-gamma subunit, partial [Nannochloropsis gaditana CCMP526] >XP_005855356.1 transcription factor iiic-gamma subunit, partial [Nannochloropsis gaditana CCMP526] >EKU21002.1 transcription factor iiic-gamma subunit, partial [Nannochloropsis gaditana CCMP526] >EKU22906.1 transcription factor iiic-gamma subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 114.0 bits (284), Expect = 3.900e-21 Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 0 Query: 1360 VAAAGKAMEQEVVFNMGRAFHQAGLLHMAVPFYQDALKMFDAHGELWKRGLGDKGHVTREAAWNLVVIYTGSKNREMARGLVERYLRV 1448 V A +A+EQEVV+NMGRAFHQAGLLHMAVPFYQDAL +FD + E R + KGHVTREAAWNLV IY + RE+AR +V RYLR+ Sbjct: 29 VKGATRALEQEVVYNMGRAFHQAGLLHMAVPFYQDALTIFDRYQE-ELRTVDGKGHVTREAAWNLVCIYREGECRELARLVVGRYLRM 115 The following BLAST results are available for this feature:
BLAST of NO10G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01320 ID=NO10G01320|Name=NO10G01320|organism=Nannochloropsis oceanica|type=gene|length=5514bpback to top protein sequence of NO10G01320.1 >NO10G01320.1-protein ID=NO10G01320.1-protein|Name=NO10G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1448bpback to top Synonyms
Publications
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