NO10G01060, NO10G01060 (gene) Nannochloropsis oceanica

Overview
NameNO10G01060
Unique NameNO10G01060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3671
Alignment locationchr10:322916..326586 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:322916..326586 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000975NSK000975Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01060.1NO10G01060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01060.1NO10G01060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01060 ID=NO10G01060|Name=NO10G01060|organism=Nannochloropsis oceanica|type=gene|length=3671bp
AAACACAGGGCATAAAAACACTCTCGACAGGCCAGGAAATGTTGCCACCG
TTGTCGTTGTCGCGGTCTTCCAACGAGGACCAGTACTTCCCCGCGGCCGA
AGCCAGGCATGCGGCCCGCCTCCTCCATCGTCTCGGGCCTTCACTGCCCC
CAATGACCTCGGCTGCCATCCTCGGGGAATTGCAGCTCTTCGTTCCTCTC
ATACATTTCCAAGAGGCCAATAACAAGGTCAGTGTGAGTGCGACCATGTC
GCTGGCGCCTCAGCCACCACCTCCACCGCAGGTCCGCGTGCGGATCAAAT
GGTGGGGGGAAAGTGGGAAAGGGACGTGCTTCGAGCCTAAGCGCACCGAC
AAGAGCAGCAGCAGCCTAAAGCCGTCCCACACTCGCCAAAATACTTGCCT
ATATCCCGTCCGCGTTGAGGAAGAAGGCGCCGTCTGGCAGTACCTTCACG
ACACAAACCGCCTCACTCTCCACATCGAAGACCTCGCCACTGGCCGACCC
TACGCCCTCGCTTACCTACCCTTAAACGAACATGGCCTCCACCAACGCGC
TGCCATGAAATTGCGGAGAATACCCATGTATTTACGTATGGCAGCAACAG
CAGGAGGAGGAGAAACGAGAGAAGGACCGCATGTAGGGGAGGTGTACGTC
CAAATGCTTATCAGAATGGGCCCTCACAGTCATTTGCGGCGGGTTTTGGC
GGTCATGCGACGCAGAGTGTCGCATGTGCCTCATCTATTGAAAGGGATGC
ATTCAGACGATGTACAAGCACTTGGGGCTATGGCATTTCCTGTTATGATC
GCTGCGGAACCAGCGTCTGCGTCGATGATATCTTCTGCTTCTTCCTTCCC
GGTGCAGCGGCAGCAGCAGCCACAGTGGCAGCTGCAGTCGCAGCACACGA
CGCCCGCGCGAAGAGCGGCCTTGTTCAGCGACGGGTGGCAGCTTCGCATG
GACAAAAGAGGGGAGGAGGAAGAGGAAGAAGGAGAGGAGGAAGAGGAAGA
AGGAGAGGAGGAAGAAGGGAGAAGGTATGCTGGTCTATATCAGGGCGTAC
CACTCAACAGGGCGGAGGCGGCGGAGGGCGGGGGCGAGGAAGGAGAGGAG
GAGGAACATATCCTCCAAACCACGCTAGCCTTCGAACACGATGAAGCCCG
TGTATACTCGGACACCCAAGATGCTTTGCCAGGTTGGCTTTCCCCCTCCT
CCTCTACTTCCTCCTTCTCCTCTTCCTCCAACCCGCCCACTGCACGGCAA
CCTCCCATGCCCAGCTTCTTCCCTTCAGTCATGCTTCCGCTCCAGCAGCA
GTCACACCAGCGATGGAGTGCGAGAGGAGGTGGCGGTGCCTCGCAATTTA
CAGTCTCAAAGCCACAGCAGTTCGACACCGACGAAGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGAGGAGGAGTGTATGCTAGTGCTGGTCTCTTGAC
CGGTAATTTGGAGGTTAAGGATGAGCAGAGGGAGGAGGAGGAGGCCAAGG
AGGAAATCCTCTTGGCAAGGAGGGAGACAGAGCTAAGGGGGGAGTCAGAG
GGGAAAATGCGACGACTACGACTGCGCGAGCGGGGGGAAATGACGGGTCT
GACTAGCCCTTCCTCCCTCGGTTCCTCCTCTTCTTCGTACTCTACCTTTT
CCAATTGTCATCGAAATCGTAATGTAGATGCGGCTCTGGAGGCAGAAGAA
AGTCTAGGTCGTTCACCAGTCTTTGAAGGAGGGGGAGTGCGAGGAGAAGG
AGAAGGAGGAGGAAGAGGGAGAGGAAGACGAGGAGGAAGAGAAGCGGGCG
GGCGGAAGGTAGGGAGGGAGGGAGGGATGCCACCTGTGGATGTCAATCGA
ATCTCAAGCCCGGCTCTAAGGGCGATTCTGGAAGGATTGGAAGAAATGTC
TGAAGACGAGGACGAGGAAGATGACGAGGAGGACGAGAACGAGGAGGAAG
GGGTGAGCGATGAGGAGGACAACTTAATCCGTTCTCTGTTGCAACGGCCC
AGGAAATGCAAGACGCGCCCTACTGCTCCTCCAACTGCTACCACTTTCAC
TACTGATGCTGCTGATTCTTCTTCTGCTTCTATGGGCATTCAGGCCTTGT
ACCCATGTCTGACAGCGGCAGACCAACGCCGACTCCTCCTCCTCTCCCGA
GCACGTTATCTCACCATTGCTTTCCCTACCCTCACCCTTCTTCACGGCGA
GCAACCGCCCAGAAAGCTGCTCCTCCGCTACTCCCTCCCTGCCTACGTCC
TGCCCCCTCCCTCGATCGCGACTGCGGTCGGGCGGAAAGGAGGGAAGGCG
GGGGGGAGGGAGCAGGTGGAGTGCGTTTTGGCGCGTGGGCCTGGGGGAGA
TTCAAGGTTCAGTAAGCTGCACCCGGGGTCGTATATGCCTGAGAAACCGA
CGCCTCTGAAAACGAATCCGTTGGTGGGATTGGTGGAGGTAAACGACAGG
GTGGTGAATGCCTGGCTTAGGGGGGGAGGGAGGGAGGGAGGGAGGGTGGT
GGTGGAGGTGTGGGTAAACGTGGCGGGACTCGGAAAGAGAGTGCGGGATC
GGTTGCTCGGGGAAGGCGGAGGTAGAGGAGGAGGTGGAGGAGGAGGTGGA
GGAGGAAGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGTGGTGGTGGTGGTAGACATGAAGGAGGAGGTCGTGGAGGAG
GGGGTGAAGGAGAAAGGGTTGGAGGAAAGGTACAACCGACCACCACCTTC
TCCACGGCCACCGGCGGCAACCAAAGTTTTTTGTTGGTGGGCAAAGCCGA
GTTCTCCCTGTCTTCCCTCCTCCTCACCCCCACCCTGCACCTGGCCTCGA
CCCTTGAGATTCGACCGACGGAGCACATGGCGAGCGTCTGGAAAACAGGC
AAGGGACGAGGAGGGAAGGCTATGGCGGGAACTTTAGCTGTAGAGCTGGC
CTTGACCCCCCCAGACGAAGGAGACGGAGGAGGGGGAGGAGGAGGAGGAA
GAGGAGTAAGAGGAAGAGGAGGAGGACTGGAGGGGGGAAGGCCGGCATCA
CCGAGGTTTGCAAGTGCGGAGGTAGAAAACGAGGATGGGGTGGTGAGGGA
GGAGGGAGGGAGGGAGCAGAGGGAAGGGAAGGCGAGGGTCCCTGATGTGT
GCCCCTTCCCGCCGACTGACGGAGGTGGAGCGTCTGTTGCCCCCCCTTCT
CGACAACCTGCACATTCCACTCTGGGCTCTCTTCCTTACATTCCTCCTCT
GCAAGCTGAGGAAGACGGTATGGCAGTAAGGGAGGAGAAGGAGGATCAGG
AGGAGGAGCAAGAGGAGGAGCAAGAGGAGGAGCAAGAGGAGGAGGAGGGT
GATGAGGAGGAGGGACCTCCTCTACCACTCCACGTGCTGCTGCACGTCGG
TCGAGTGTGGGGGCCGGGCTTGAGAAGCTTGCGACAGGAAAAGAAATTGC
TAAGACTTCAATTTGGAGATATTTGGTCTGCATTAGGGGGAGGGAAGGAG
GGAGGAAAAGAGGAGAAGGGGAAGGAGGATGAAGAGGTACACGTGGTGGA
AGCGACGGCACGGGAGTTGCGGACGACGAACCTGTCGGCCTCTGGGAGTG
TTCAAGAATTCGATTATGAGTGGAGGGGCAAGTGTGGAGGGGGGTGGGGA
AGGTGGGGTTACTGTCATTGA
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protein sequence of NO10G01060.1

>NO10G01060.1-protein ID=NO10G01060.1-protein|Name=NO10G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1211bp
MLPPLSLSRSSNEDQYFPAAEARHAARLLHRLGPSLPPMTSAAILGELQL
FVPLIHFQEANNKVSVSATMSLAPQPPPPPQVRVRIKWWGESGKGTCFEP
KRTDKSSSSLKPSHTRQNTCLYPVRVEEEGAVWQYLHDTNRLTLHIEDLA
TGRPYALAYLPLNEHGLHQRAAMKLRRIPMYLRMAATAGGGETREGPHVG
EVYVQMLIRMGPHSHLRRVLAVMRRRVSHVPHLLKGMHSDDVQALGAMAF
PVMIAAEPASASMISSASSFPVQRQQQPQWQLQSQHTTPARRAALFSDGW
QLRMDKRGEEEEEEGEEEEEEGEEEEGRRYAGLYQGVPLNRAEAAEGGGE
EGEEEEHILQTTLAFEHDEARVYSDTQDALPGWLSPSSSTSSFSSSSNPP
TARQPPMPSFFPSVMLPLQQQSHQRWSARGGGGASQFTVSKPQQFDTDEE
GGREGGREGGGGVYASAGLLTGNLEVKDEQREEEEAKEEILLARRETELR
GESEGKMRRLRLRERGEMTGLTSPSSLGSSSSSYSTFSNCHRNRNVDAAL
EAEESLGRSPVFEGGGVRGEGEGGGRGRGRRGGREAGGRKVGREGGMPPV
DVNRISSPALRAILEGLEEMSEDEDEEDDEEDENEEEGVSDEEDNLIRSL
LQRPRKCKTRPTAPPTATTFTTDAADSSSASMGIQALYPCLTAADQRRLL
LLSRARYLTIAFPTLTLLHGEQPPRKLLLRYSLPAYVLPPPSIATAVGRK
GGKAGGREQVECVLARGPGGDSRFSKLHPGSYMPEKPTPLKTNPLVGLVE
VNDRVVNAWLRGGGREGGRVVVEVWVNVAGLGKRVRDRLLGEGGGRGGGG
GGGGGGRGGGGGGGGGGGGGGGGGGGGGRHEGGGRGGGGEGERVGGKVQP
TTTFSTATGGNQSFLLVGKAEFSLSSLLLTPTLHLASTLEIRPTEHMASV
WKTGKGRGGKAMAGTLAVELALTPPDEGDGGGGGGGGRGVRGRGGGLEGG
RPASPRFASAEVENEDGVVREEGGREQREGKARVPDVCPFPPTDGGGASV
APPSRQPAHSTLGSLPYIPPLQAEEDGMAVREEKEDQEEEQEEEQEEEQE
EEEGDEEEGPPLPLHVLLHVGRVWGPGLRSLRQEKKLLRLQFGDIWSALG
GGKEGGKEEKGKEDEEVHVVEATARELRTTNLSASGSVQEFDYEWRGKCG
GGWGRWGYCH*
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Synonyms
Publications