NO10G00860, NO10G00860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00860 vs. NCBI_GenBank
Match: EWM25308.1 (translation initiation factor eif-2b subunit alpha [Nannochloropsis gaditana]) HSP 1 Score: 456.8 bits (1174), Expect = 5.500e-125 Identity = 247/325 (76.00%), Postives = 266/325 (81.85%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 MS+SRAVTIMGIQNDL+ AT +LI+YER++S GRASISFRA VELFFRYATR NDDVPDF LN+LFI RG+ FVANALKSR IAELGH+FVQDGM+IL HGRSEVVTGVL RAAQ+NKNFTVM+TEGRPEGSGFKAAERLTE GIPVTVILDSAA YFMERVDIVLLGAEGVVESGGIVNKIGTCQ+AMVAKLYNKPLYVAAESYKFARLYPLTQADLE+N+DND+ +PL P G N F+SG GVAAM TT+NPSCDYTPA YISLLFTDLGILTPAAVSDELIKLYQ Sbjct: 89 MSSSRAVTIMGIQNDLKAATSELIEYERRISGGRASISFRACVELFFRYATRKNDDVPDFETLNKLFIARGHHFVANALKSRLGIAELGHSFVQDGMMILTHGRSEVVTGVLIRAAQSNKNFTVMVTEGRPEGSGFKAAERLTEAGIPVTVILDSAAAYFMERVDIVLLGAEGVVESGGIVNKIGTCQLAMVAKLYNKPLYVAAESYKFARLYPLTQADLEDNVDNDVEKPLFPPLLTGIEGGTATGKVEEGEGRHRQERGSSGNL-LGKNTIFDSG--PGVAAM-TTKNPSCDYTPAQYISLLFTDLGILTPAAVSDELIKLYQ 409
BLAST of NO10G00860 vs. NCBI_GenBank
Match: OQR89827.1 (translation initiation factor eIF-2B subunit alpha [Thraustotheca clavata]) HSP 1 Score: 261.9 bits (668), Expect = 2.600e-66 Identity = 155/323 (47.99%), Postives = 197/323 (60.99%), Query Frame = 0 Query: 6 AVTIMGIQNDLQEATKKL---IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 A T+M I+N LQEA +L D S +SIS A +LF RY TR + DF+ I RG FVA +L SR+ IA+LGHNFV+DGM +L HG S VVTG+L +AA+ K+F+V++TEGRP +G+K AE L++ GIP TVI+D+A GY+ME+VD+V++GAEGVVE+GGIVNKIGT AM+A KP YVAAES+KFARLYPL Q+D N ++ NV E+ +T +P+CDYTP YISLLFTDLG+LTP+AVSDELIKLYQ Sbjct: 37 ASTMMEIENALQEAAAQLKAAADTPVDKSITLSSISVTAVCQLFLRYVTRCFLEFADFDQCKAQLIDRGKMFVATSLTSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAK-TKHFSVVVTEGRPNNAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESFKFARLYPLNQSDFPHNCTDE-------------------------------------------NVPSET------HPNMTVGSPTCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 309
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_008604149.1 (hypothetical protein SDRG_00450 [Saprolegnia diclina VS20] >EQC42726.1 hypothetical protein SDRG_00450 [Saprolegnia diclina VS20]) HSP 1 Score: 258.8 bits (660), Expect = 2.200e-65 Identity = 152/327 (46.48%), Postives = 198/327 (60.55%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL--IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 + S A T+M I++ L EA +L ++ +SIS A +LF RY TR + DF+ I RG F +L SR+ IA+LGHNFV+DGM +L HG S VVTG+L +AA+ K+F+V++TEGRP G+G+K AE L++ GIP TVI+D+A GY+ME+VD+V++GAEGVVE+GGIVNKIGT AM+A KP YVAAESYKFARLYPL Q+D + +D++ +P A +T +PSCDYTP YISLLFTDLG+LTP+AVSDELIKLYQ Sbjct: 32 VQRSSASTMMEIESALTEAAAQLKAAADGPAPTQALSSISVTAVCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMQVLTHGASRVVTGLLLQAAK-TKHFSVLVTEGRPNGAGYKTAEVLSKAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHSRKDDMSN--LPACACRPK--------------------------------------TTAQANLTVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 317
BLAST of NO10G00860 vs. NCBI_GenBank
Match: OQR91934.1 (translation initiation factor eIF-2B subunit alpha [Achlya hypogyna]) HSP 1 Score: 255.0 bits (650), Expect = 3.200e-64 Identity = 150/328 (45.73%), Postives = 191/328 (58.23%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEAT---KKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 + S A T+M I++ L +A K D +SIS A +LF RY TR + DF+ I RG F +L SR+ IA+LGHNFV+DGM +L HG S VVTG+L +AA+ K+F+V++TEGRP G+G+K AE L+ GIP TVI+D+A GY+ME+VD+V++GAEGVVE+GGIVNKIGT AM+A KP YVAAES+KFARLYPL Q+D N +D + +T +PSCDYTP YISLLFTDLG+LTP+AVSDELIKLYQ Sbjct: 32 VQRSSASTMMEIESALTDAAAALKAAADGPAASKVQLSSISVTAVCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSLLSRKRIADLGHNFVRDGMKVLTHGASRVVTGLLLQAAK-TKHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMEKVDMVIVGAEGVVENGGIVNKIGTFSAAMIAHAMKKPFYVAAESFKFARLYPLNQSDFPHNRHDDTT----------------------------------------------LDAAVAKHPNLTVGSPSCDYTPPHYISLLFTDLGVLTPSAVSDELIKLYQ 312
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_009831638.1 (hypothetical protein H257_07709 [Aphanomyces astaci] >ETV78919.1 hypothetical protein H257_07709 [Aphanomyces astaci]) HSP 1 Score: 253.4 bits (646), Expect = 9.200e-64 Identity = 151/341 (44.28%), Postives = 197/341 (57.77%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL--------------IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADL--EENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 + +S A T+M +++ LQ+A +L I ++ +SIS AG +LF RY TR + DF+ I RG F + SR+ I + GHNFV+DGMV+L HG S VVT VL +AA+ +K+F+V++TEGRP G+G+K AE L+ GIP TVI+D+A GY+MERV +V++GAEGVVE+GGIVNKIGT AM+A KP YVAAESYKFARLYPL Q D D + L P + + V ++T +P+CDYTP YISLLFTDLG+LTP+AVSDELIKLYQ Sbjct: 35 IQHSEASTMMEMESALQDAASQLKAAAAANSPADNKNIATHSTSAQSLSSISVTAGCQLFLRYVTRCFLEFDDFDQCKSQLIDRGKLFAETSSTSRKRIVDFGHNFVRDGMVVLTHGASRVVTKVLLQAAK-SKHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMERVSMVIVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQHDFPHSRRTDESVVSMLAP------------------------------------SCTCDPELVLPSHPLLTAGSPACDYTPPQYISLLFTDLGVLTPSAVSDELIKLYQ 338
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_013898655.1 (Translation initiation factor eIF-2B subunit alpha [Monoraphidium neglectum] >KIY99635.1 Translation initiation factor eIF-2B subunit alpha [Monoraphidium neglectum]) HSP 1 Score: 252.7 bits (644), Expect = 1.600e-63 Identity = 148/326 (45.40%), Postives = 191/326 (58.59%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQMSRGRASISFRAGVELFFRYATRNND-DVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLE-ENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLY 325 + NS A T+MG++ +L++A L SIS +AG ELF RY TR + ++ DF A I RGNRF ++++R+ IAELG F+++G +L HGRS VV +L RA NF+V++TEGRP+G+G A L E+G+PVT++LDS Y +ERVD+VL+G EGVVE+GG++NK+GT QIA+ AK NKP YVAAESYKFARLYPL Q DL E+ D+ PL+P V NPS DYTP YISLL TDLG+LTPAAVSDELI+LY Sbjct: 54 IKNSGAQTMMGLEKELKDAAAAL------QRCNPTSISLKAGCELFLRYTTRTSALEMEDFAAAKARLIERGNRFADISIRARQAIAELGARFIRNGSTLLTHGRSRVVLALLQRAVSQGINFSVVVTEGRPDGTGQSMARALDELGVPVTMVLDSGVAYALERVDMVLVGGEGVVENGGVINKLGTYQIALCAKALNKPFYVAAESYKFARLYPLNQQDLPVEHKPVDVG-PLLP-------------------------------------------------RSVAVDNPSRDYTPPQYISLLVTDLGVLTPAAVSDELIQLY 323
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_008880135.1 (hypothetical protein H310_14120 [Aphanomyces invadans] >ETV91298.1 hypothetical protein H310_14120 [Aphanomyces invadans]) HSP 1 Score: 250.0 bits (637), Expect = 1.000e-62 Identity = 150/344 (43.60%), Postives = 199/344 (57.85%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEA-------------------TKKLIDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 + +S+A T+M I++ LQ+A KK ++ +SIS AG +LF RY TR + DF+ I RG F + SR+ I + GHNFV+DGMV+L HG S VVT +L +AA+ +K+F+V++TEGRP G+G+K AE L+ GIP TVI+D+A GY+MERV +V++GAEGVVE+GGIVNKIGT AM+A KP YVAAESYKFARLYPL Q+D + + L+P + + V ++T +P+CDYTP YISLLFTDLG+LTP+AVSDELIKLYQ Sbjct: 35 IQHSKASTMMEIESALQDAAAQLKAAAAANTPASATTDNKKNYVAHSTSAQSLSSISVTAGCQLFLRYVTRCFLEFDDFDLCKSQLIDRGKLFAETSSTSRKRIVDFGHNFVRDGMVVLTHGASRVVTKLLLQAAK-SKHFSVVVTEGRPNGAGYKTAELLSNAGIPTTVIVDAAMGYYMERVSMVVVGAEGVVENGGIVNKIGTFSCAMIAHAMKKPFYVAAESYKFARLYPLNQSDFPHSRTEE--SMLLP------------------------------------SCTCDPELVLPSHPLLTVGSPTCDYTPPQYISLLFTDLGVLTPSAVSDELIKLYQ 339
BLAST of NO10G00860 vs. NCBI_GenBank
Match: OWY92697.1 (Translation initiation factor eIF-2B subunit alpha [Phytophthora megakarya]) HSP 1 Score: 248.1 bits (632), Expect = 3.900e-62 Identity = 147/334 (44.01%), Postives = 193/334 (57.78%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQ---MSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L ++ + +R SI+ AG +LF RY TR + DF+ I RG F +L SR I+E+GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L +VGIP TVILDSA Y+ME++DIV++GAEGVVE+GGIVN IGT A++A+ NK YVAAESYKFARLYPLTQ D+ + + SG +AG VT +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 34 ITRSEASTMMQMEGELQEAAQQLRAFQSEDDAATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLTSRNRISEVGHNFIRDGMKVLTHGKSRVVIALLCEAAK-TKNFSVFVTEGRSNSSGVGTAEELAKVGIPTTVILDSAVAYYMEQIDIVIVGAEGVVENGGIVNSIGTYSTAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDIAGGETTDETMKDVTFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 319
BLAST of NO10G00860 vs. NCBI_GenBank
Match: POM67007.1 (Translation initiation factor eIF-2B subunit alpha [Phytophthora palmivora var. palmivora]) HSP 1 Score: 247.7 bits (631), Expect = 5.100e-62 Identity = 146/328 (44.51%), Postives = 194/328 (59.15%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKLIDYERQ---MSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAGVAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L ++ + +R SI+ AG +LF RY TR + DF+ I RG F +L SR I+E+GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L +VGIP TVILDSA Y+ME++DIV++GAEGVVE+GGIVN IGT A++A+ NK YVAAESYKFARLYPLTQ D+ + ++ G + G E + VT +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 35 ITRSEASTMMQMEGELQEAAQQLRAFQAEDDAATRFHNSIATTAGCQLFLRYVTRCFLEFDDFDLCRSQLIDRGKLFAETSLSSRNRISEVGHNFIRDGMKVLTHGKSRVVIALLCEAAK-TKNFSVFVTEGRSNASGVSTAEELAKVGIPTTVILDSAVAYYMEQIDIVIVGAEGVVENGGIVNSIGTYSTAVIAQALNKQFYVAAESYKFARLYPLTQRDVPQKQMAAIS---------------------------------------GESAGGE--TTGETMKDVTFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 320
BLAST of NO10G00860 vs. NCBI_GenBank
Match: XP_009522099.1 (putative initiation factor [Phytophthora sojae] >EGZ19382.1 putative initiation factor [Phytophthora sojae]) HSP 1 Score: 247.3 bits (630), Expect = 6.600e-62 Identity = 148/336 (44.05%), Postives = 192/336 (57.14%), Query Frame = 0 Query: 1 MSNSRAVTIMGIQNDLQEATKKL-----IDYERQMSRGRASISFRAGVELFFRYATRNNDDVPDFNALNQLFITRGNRFVANALKSREVIAELGHNFVQDGMVILMHGRSEVVTGVLTRAAQNNKNFTVMITEGRPEGSGFKAAERLTEVGIPVTVILDSAAGYFMERVDIVLLGAEGVVESGGIVNKIGTCQIAMVAKLYNKPLYVAAESYKFARLYPLTQADLEENIDNDLNRPLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGNVGFESGSVAG------VAAMVTTQNPSCDYTPATYISLLFTDLGILTPAAVSDELIKLYQ 326 ++ S A T+M ++ +LQEA ++L D Q +R SI+ AG +LF RY TR + DF+ I RG F +L SR+ I+++GHNF++DGM +L HG+S VV +L AA+ KNF+V +TEGR SG AE L +VGIP TVILDSA Y+ME+VDIV++GAEGVVE+GGIVN IGT A++A+ K YVAAESYKFARLYPLTQ D+ + + SG +AG VT +P DYTP YI+L+FTDLG+LTP+AVSDELIKLYQ Sbjct: 35 ITRSGASTMMQMEGELQEAAQQLRAFQAADDNSQATRFHNSIATTAGCQLFLRYVTRTFLEFDDFDLCRSQLIDRGKLFAETSLSSRKRISDVGHNFIRDGMKVLTHGKSRVVIALLREAAK-TKNFSVFVTEGRSNASGVGTAEELAKVGIPTTVILDSAVAYYMEQVDIVVVGAEGVVENGGIVNSIGTYSTAVIAQALKKQFYVAAESYKFARLYPLTQRDVPQK-----------------------------------------------QMAAISGDIAGGESSDETMKNVTFASPFFDYTPPGYIALMFTDLGVLTPSAVSDELIKLYQ 322 The following BLAST results are available for this feature:
BLAST of NO10G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00860 ID=NO10G00860|Name=NO10G00860|organism=Nannochloropsis oceanica|type=gene|length=978bpback to top protein sequence of NO10G00860.1 >NO10G00860.1-protein ID=NO10G00860.1-protein|Name=NO10G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bpback to top Synonyms
Publications
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