NO10G00030, NO10G00030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00030 vs. NCBI_GenBank
Match: GAX17143.1 (carbohydrate 4-sulfotransferase 9 [Fistulifera solaris]) HSP 1 Score: 175.3 bits (443), Expect = 5.500e-40 Identity = 98/263 (37.26%), Postives = 146/263 (55.51%), Query Frame = 0 Query: 311 ILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK------------IRRHHRNAEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFR---GEKNKLHSGGADEKVNIFYSNATTKNRVMALMAPD 559 ++E GDF E D PI+I R++L FF +PKV C +K+LFRRM GY +WAT ++ ++ LP +P+ NGL YL PL++AN I+ P WT+AIF+RDP R VSAYLDK + S E F+ +V N HW+PQ++ + DK+ ++FVG E+LA+D + LLR++GAW+ +GA GWG+ G ++IF+ G + H+ A +K+ S+A + + A D Sbjct: 94 LVEYGDF----IYENDDWDAAPIIIERYKLAFFTIPKVGCTTWKQLFRRMMGYSNWAT-----------EEYVNMLPWNPQTNGLKYLYDFPLEKANEIMTSPEWTRAIFVRDPKERLVSAYLDKGVGNPNYMREKCCGKSEDCVRDASRSLESFL-RVAMKCDNAHWSPQAKRID-DKYWSYINFVGRMENLADDAKRLLRQIGAWQRYGASGWGKGGKNSIFQTKAGGVGRYHATNAHDKLKETISSAELEEAIEMYYAED 339
BLAST of NO10G00030 vs. NCBI_GenBank
Match: GAX09225.1 (carbohydrate 4-sulfotransferase 9 [Fistulifera solaris]) HSP 1 Score: 169.9 bits (429), Expect = 2.300e-38 Identity = 97/266 (36.47%), Postives = 147/266 (55.26%), Query Frame = 0 Query: 308 LNVILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK------------IRRHHRNAEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFR---GEKNKLHSGGADEKVNIFYSNATTKNRVMALMAPD 559 L ++E GD+ E D PI+I R++L FF +PKV C +K+LFRR+ GY +WAT ++ ++ LP +P+ NGL YL PL++AN I+ P WT+AIF+RDP R VSAYLDK + S E F+ +V N HW+PQ++ + DK+ ++FVG E+LA+D + LLR++GAW+ +GA GWG+ G ++IF+ G + H+ A +K+ S+A + + A D Sbjct: 91 LKSLVEYGDW----IYENDDWDAAPIIIERYKLAFFTIPKVGCTTWKQLFRRIMGYSNWAT-----------EEYVNMLPWNPQTNGLKYLYDFPLEKANEIMTSPEWTRAIFVRDPKERLVSAYLDKGVGNPNYMREKCCGKSEDCIRDASRSLESFL-RVAMKCDNSHWSPQAKRID-DKYWSHINFVGRMENLADDAKRLLRQIGAWQRYGASGWGKGGNNSIFQTKAGGVGRHHATNAHDKLKEKISSAELEEAIEMYYAED 339
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_002182357.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46258.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.4 bits (407), Expect = 8.200e-36 Identity = 87/227 (38.33%), Postives = 128/227 (56.39%), Query Frame = 0 Query: 311 ILEPGDFAL--DSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK-IRRHHRNAEMRKLSFEEFITKVE---------QGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFRGE 526 +L+ GD+ D A+ + D PIV+ +L+FF PKV C +K+LFRRM G +DW + S LPH+P++NGL YL PL+EA+ ++ P WT+A+ +RDP RF+SA+LDK + H++ + R + I + + + HW Q+ + W P MDFVG E+ A D + LL ++GAW+EFGA GWG DG SAIF+ + Sbjct: 118 LLQAGDYIYYQDPAIPRWD--AAPIVVESHKLLFFTTPKVGCTVWKQLFRRMMGAKDWKS-----------QDAQSLLPHNPEVNGLKYLYDYPLEEADRMMTSPKWTRAVMVRDPKQRFLSAFLDKAVSNRHQHIQHRCCPDQACIADAQTLAGFLRLCERCDDEHWRAQNARLDSKFW-PYMDFVGHVENSAADAQALLTRVGAWDEFGASGWGTDGTSAIFQSK 330
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_002178190.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49855.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 150.2 bits (378), Expect = 1.900e-32 Identity = 104/355 (29.30%), Postives = 169/355 (47.61%), Query Frame = 0 Query: 264 DTVECNGLRQRISVLSPSQLKIMATETHTVPQPQESSQLEKKVGLNVILEPGDFAL-------DSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK--------IRRH-------------------------------HRN------AEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWG----EDGA-SAIFRGEKNKLHSGGADEKVNIFYSNATTKNRVMALMAPDLNY 562 D V+ +G R+ ++ +P ++ A ++ ++ + ++ L+K+ + +P DFA D E + PIVI + +L+FF +PKV C FK+LFRR+ +DW +ND LPH P INGL YL +A+ +L DP+WT+A+F+RDP+ R +SAYLDK ++ H RN + +SF++F+ KV + HW Q Q W ++FVG E++A DTE LL +LG WE++GA GWG DG +++F G H+ G+ +++ + K ++ L D ++ Sbjct: 77 DDVKLSGPRENDTLRTP---QLSAVDSESIRRTLQAPSLKKR-----LYQPSDFANLTLLTFGDPIFEYGGYDEAPIVIPQHKLLFFTLPKVGCTVFKQLFRRVMNLKDWKV-HNDV------------LPHVPGINGLYYLYHYTPADADYMLTDPSWTRAVFVRDPIERILSAYLDKATDQNGVYLQNHCCPVAVKLALQKKTEGHTAYHLLSCQKHLAQQRNPVKTNFGKQALVSFDDFVQKVMPICSDPHWRSQKQRMGPLYW-DHINFVGHMENIANDTERLLTQLGMWEQYGASGWGSNPRNDGENTSVFAGLSTVKHATGSGSRLDQYLKTIDLKATLLQLTREDYDF 409
BLAST of NO10G00030 vs. NCBI_GenBank
Match: GAX25292.1 (hypothetical protein FisN_5Lu384 [Fistulifera solaris]) HSP 1 Score: 149.4 bits (376), Expect = 3.200e-32 Identity = 97/284 (34.15%), Postives = 149/284 (52.46%), Query Frame = 0 Query: 275 ISVLSPSQLKIMATETHTVPQPQESSQLEKKVGLNVILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRH---HRN---------AEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFRGEK---NKLHSGGADEKVNIFYS 544 +S L L+ T + +E+ +++++ GD+ ++ P+VI F+L+FF KV C +K+LFRRM G DW +PD LP + ++NGL YL + A+M++ +P WT+AIF+RDP RF+SAYLDK RN AE RK S + F+ ++ +N HW PQS +K+ P ++FVG E L+ED E LLR++GAWE +GA GWG G ++F+ ++ + H+ GA K+ + S Sbjct: 29 LSRLGNHHLQTPCGSTRNIVARKEAPSQTNDARDHLLVDYGDY----IYKKGSWDGAPVVIEDFKLVFFTSAKVGCTVWKQLFRRMMGIPDWKAE-------QTPD----LLPWNSELNGLKYLYDYDRETASMMMTNPEWTRAIFVRDPKERFLSAYLDKAFHKSFVDRNCCPFKMTCAAEARK-SAKHFLELIKT-CENPHWMPQSSRME-EKYWPFINFVGYMEHLSEDGERLLRQIGAWETYGAWGWGPTGKDSVFQSQEGGGGRAHATGARNKLKQYIS 294
BLAST of NO10G00030 vs. NCBI_GenBank
Match: GAX13362.1 (carbohydrate 4-sulfotransferase 8 [Fistulifera solaris]) HSP 1 Score: 148.7 bits (374), Expect = 5.500e-32 Identity = 84/227 (37.00%), Postives = 119/227 (52.42%), Query Frame = 0 Query: 311 ILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK-IRRHHRNAEMRKLSFEE--------------FITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIF 523 +++PGDF + D PIVI +L+FF +PKV C +K+LFRRMEGY DW + LPH+P NGL YL P+D+AN I+ P WTKA+ +R+P RF+SA+LDK + H + + F E F+ ++ ++ HW Q+ + W P +D V E ED + LL+K+GAW+EFG GW +D S IF Sbjct: 85 LVQPGDFIYYKDDRRWD--SAPIVIESHKLVFFTIPKVGCTVWKQLFRRMEGYSDWQDQDGE-----------RLLPHNPNENGLKYLYDYPIDKANEIMTSPKWTKAMMVREPKQRFLSAFLDKAVSNDHAHIMGKCCQFMEDPQQCVDSAQTASGFLNLIKT-CEDDHWRAQNDRVDYKYW-PYIDMVLHVEKAEEDAKRLLQKIGAWDEFGQTGWSKDHQSPIF 296
BLAST of NO10G00030 vs. NCBI_GenBank
Match: GAX09230.1 (carbohydrate 4-sulfotransferase 8 [Fistulifera solaris]) HSP 1 Score: 144.1 bits (362), Expect = 1.400e-30 Identity = 82/227 (36.12%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 311 ILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK-IRRHHRNAEMRKLSFEE-------------FITKVEQGLKNRHWNPQSQFYNLD-KWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIF 523 +++PGDF ++ D PIVI +L+FF +PKV C +K+LFRRMEGY DW + LPH+P NGL YL +++AN I+ P WTKA+ +R+P RF+SA+LDK + H + + F E ++ + ++ HW ++Q+ +D K+ P +D V E+ ED + LL+K+GAW+EFG GW D S IF Sbjct: 9 LVQPGDFIYYRDDKRWD--SAPIVIESHKLVFFTIPKVGCTVWKQLFRRMEGYSDWQDQDGE-----------RLLPHNPNENGLKYLYDYSIEKANEIMTSPKWTKAMMVREPKQRFLSAFLDKAVSNDHAHIRNKCCQFMEDAQQCVDSAQTASGFLELIKACEDDHW--RAQYDRVDYKYWPYIDMVLHVETAEEDAKRLLQKIGAWDEFGQTGWSSDHQSPIF 220
BLAST of NO10G00030 vs. NCBI_GenBank
Match: OEU13482.1 (putative chondroitin 6-sulfotransferase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 143.3 bits (360), Expect = 2.300e-30 Identity = 92/255 (36.08%), Postives = 121/255 (47.45%), Query Frame = 0 Query: 332 PIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK-----------------IRR--------------------HHRNAEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGAS-----AIFRGEKNKL-HSGGADEKVNIFYS 544 PIVI +L+FF VPK AC FKKLFRRM GYE+W L HDP+ NGL YL Q P D+ N + WT+AIF+RDPM R +SAY+DK ++R H N FE F+ + ++ HWN Q W + +FVG FE++ DT LL+K+GA++EFGA GWGE + +IF EKN H G+ + +YS Sbjct: 101 PIVIESHKLLFFTVPKNACTTFKKLFRRMMGYENW----------------LIASAHDPETNGLKYLGQYPPDKRNEFMTSSDWTRAIFVRDPMERTLSAYMDKGLKSGPRHWKPSITGAHVKRHCCRLWGKRNPICNLSPFTPHETNLTEYNFPFESFVVSFMRQCQDPHWNQQILRMKPKNWKRI-NFVGHFENIQNDTRRLLKKIGAYKEFGATGWGESSSDTNKTLSIF--EKNLANHKTGSGNYMKKYYS 336
BLAST of NO10G00030 vs. NCBI_GenBank
Match: OEU12681.1 (hypothetical protein FRACYDRAFT_270430 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 138.7 bits (348), Expect = 5.700e-29 Identity = 82/241 (34.02%), Postives = 125/241 (51.87%), Query Frame = 0 Query: 320 DSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAY--LDKIRRH-------HRNAEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFRGEKNKL---------HSGGADEKVNIFY 543 D+ + D PIV+ +++LIFF +P +A ++K+ FRRME +DW P G LPHDP+ NGL YL PL +A ++ +P WTKAIF+R P RF+S + + + R H HR L ++ Q + +W P S+ ++ +W ++F+G E + D+E LL K+GAWE G +GWG DG IF ++N +S AD+ ++ FY Sbjct: 119 DTIYRRDDWDAAPIVVEKYKLIFFTLPYIAATKWKQSFRRMEQLDDW-KDIGGPKG----------LPHDPERNGLKYLYDFPLKQAEDMMTNPEWTKAIFVRSPKDRFLSIFYHMSRNREHVENRCCPHRPGCSSALDDMPSFIELMQMCFSINWAPFSERFD-KRWWSYINFIGKIEDIHIDSEKLLSKIGAWELIGENGWGSDGKEPIFIKDENAFASVHDSLGRYSPTADKLLDAFY 347
BLAST of NO10G00030 vs. NCBI_GenBank
Match: CBN76839.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.4 bits (324), Expect = 3.500e-26 Identity = 74/209 (35.41%), Postives = 108/209 (51.67%), Query Frame = 0 Query: 339 RLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRHHRNAEM------RKLSFEEFITKVEQGLK------------------NRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFR 524 +++ +PKVAC + LF R++G E+W T + + D L+ + +P + A+ ILNDPTWTK +FLRDP R +S +LDK+ H R+ + LSFE+F+ + K N HW PQ F+ LDK+LP DFVG F+ + E +E L++ G WE+FGA GWG G +A F+ Sbjct: 724 KVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHK----------DMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKV-VHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQ-LFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920 The following BLAST results are available for this feature:
BLAST of NO10G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00030 ID=NO10G00030|Name=NO10G00030|organism=Nannochloropsis oceanica|type=gene|length=5430bpback to top protein sequence of NO10G00030.1 >NO10G00030.1-protein ID=NO10G00030.1-protein|Name=NO10G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bpback to top Synonyms
Publications
|