NO01G03510, NO01G03510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03510 vs. NCBI_GenBank
Match: EWM29285.1 (vamp-like protein ykt62 [Nannochloropsis gaditana]) HSP 1 Score: 389.4 bits (999), Expect = 6.600e-105 Identity = 190/199 (95.48%), Postives = 198/199 (99.50%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MKIVAI+LHRYQ+DTPEPIIL+S TELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQES+TYPP+QEAIREYQDPAKADKITKIRRDLDETT+ILHKTIDAVLERGVKLDELV+RSNDLSSQSKLFYKQARKTNSCC+IS Sbjct: 1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199
BLAST of NO01G03510 vs. NCBI_GenBank
Match: CBJ28188.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 284.3 bits (726), Expect = 3.000e-73 Identity = 133/199 (66.83%), Postives = 167/199 (83.92%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MK+V+I RY +DT EP++L+ EL S+G+FQR GI+EMC F SKT++KR QPGQRQ++QHE+YNVH ++R DGL GTV ADLEYPPRVAFVLL+ LLE++A + +W S + E+I +PP+ + I +YQDPAKADKITKI+RDLDETTE+LH+TID VLERGV+LDELVDRS+DLS QSK+FYKQARKTNSCC +S Sbjct: 1 MKVVSICTMRYNRDTAEPVMLSQVNELSSYGFFQRQGIKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLEQYAEQV-SWQSEIRHEAIRFPPMDKMIVDYQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 198
BLAST of NO01G03510 vs. NCBI_GenBank
Match: GAX28755.1 (synaptobrevin homolog YKT6 [Fistulifera solaris]) HSP 1 Score: 259.2 bits (661), Expect = 1.000e-65 Identity = 123/200 (61.50%), Postives = 161/200 (80.50%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFA-VDITNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MK+V +++ R D EP+ LT ATEL SFG+FQR ++EM F++KT +KR +PGQRQ+++HE Y VHC++R+DGLGGTV D EYP RVAFV+L LL+ FA +W +VT ES+T+PP E +++YQ+PA+ADKITKI++DLDETT+ILHKTID+VLERGVKLD LV++SNDLS+QSKLFYK A+KTNSCC +S Sbjct: 1 MKVVGLAIVRTGSDLNEPVPLTVATELSSFGFFQRQSVKEMLMFLTKTFMKRTEPGQRQSVEHEGYVVHCYVRSDGLGGTVTTDGEYPARVAFVMLGQLLDEFAQKQGDSWKTVTTPESVTFPPADEYLQKYQNPAEADKITKIQKDLDETTQILHKTIDSVLERGVKLDNLVEKSNDLSAQSKLFYKSAKKTNSCCVVS 200
BLAST of NO01G03510 vs. NCBI_GenBank
Match: GAX18204.1 (synaptobrevin homolog YKT6 [Fistulifera solaris]) HSP 1 Score: 258.1 bits (658), Expect = 2.300e-65 Identity = 123/200 (61.50%), Postives = 161/200 (80.50%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFA-VDITNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MKIV +++ R D EP+ LT ATEL SFG+FQR ++EM F++KT +KR +PGQRQ+++HE Y VHC++R+DGLGGTV D EYP RVAFV+L LL+ FA +W +VT ES+++PP E +++YQ+PA+ADKITKI++DLDETT+ILHKTID+VLERGVKLD LV++SNDLS+QSKLFYK A+KTNSCC +S Sbjct: 1 MKIVGLAIVRTGSDLNEPVPLTVATELSSFGFFQRQSVKEMLMFLTKTFMKRTEPGQRQSVEHEGYVVHCYVRSDGLGGTVTTDGEYPARVAFVMLGQLLDEFAQKQGDSWKTVTTPESVSFPPADEYLQKYQNPAEADKITKIQKDLDETTQILHKTIDSVLERGVKLDNLVEKSNDLSAQSKLFYKSAKKTNSCCVVS 200
BLAST of NO01G03510 vs. NCBI_GenBank
Match: OEU22359.1 (snare-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 255.8 bits (652), Expect = 1.100e-64 Identity = 124/200 (62.00%), Postives = 157/200 (78.50%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDI-TNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MK++A+S R + P+PII EL SFG+FQR I+EM F++KT +KR +PGQRQ+I HE Y VHC++R+DGLGGTVI D EYP RVAFVLLS +L+ F + W + T ES+T+P ++E + +YQDP+ ADKITKI+ DLDETT+ILHKTID+VLERGVKLD LV+RSNDLS+QSK+FYKQA+KTNSCC IS Sbjct: 1 MKLLALSTVRTGNELPDPIIACFEAELSSFGFFQRPTIKEMLSFLTKTFMKRTEPGQRQSITHEGYVVHCYIRSDGLGGTVITDEEYPARVAFVLLSQILDEFTTSVGDTWKTCTVHESMTFPALKEYLTKYQDPSAADKITKIQNDLDETTQILHKTIDSVLERGVKLDNLVERSNDLSAQSKMFYKQAKKTNSCCVIS 200
BLAST of NO01G03510 vs. NCBI_GenBank
Match: XP_002182037.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46577.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 250.4 bits (638), Expect = 4.800e-63 Identity = 120/200 (60.00%), Postives = 157/200 (78.50%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDI-TNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTIS 200 MK+V +++ R D EPI LT + +L SFG+FQR ++EM F++KT KR +PGQRQ+++HE Y VHC++R DGLGGTV D EYP RVAFVLL LLE F + +W +VT ES+ + +E +++YQ+PA+ADK+TKI++DLDETT+ILHKTID+VLERGVKLD LVD+SNDLS+QSK+FYKQA+KTNSCC IS Sbjct: 1 MKVVGLAVVRTGSDLNEPIPLTVSNDLSSFGFFQRQSVKEMLMFLTKTFTKRTEPGQRQSVEHEGYVVHCYVRADGLGGTVTTDQEYPARVAFVLLGQLLEDFTNEHGDSWKTVTTPESVVFTKAEEYLQKYQNPAEADKVTKIQKDLDETTQILHKTIDSVLERGVKLDSLVDKSNDLSAQSKMFYKQAKKTNSCCVIS 200
BLAST of NO01G03510 vs. NCBI_GenBank
Match: CCI40594.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 240.0 bits (611), Expect = 6.500e-60 Identity = 118/199 (59.30%), Postives = 152/199 (76.38%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDIT-NWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTI 199 MKIVAI L R KD +P+IL +A EL SFGYFQR+G+REM F S+T IKR Q GQRQ+IQHEEY H +++ DGL G V+ D EYPPRVAF LL+ L+E + ++ +W S T +PP+ +A+ +YQDP+KADKI+ I+++LDETT IL KTID VLERG KLD+LV++S DLS+QSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDKDGQDPLILAAAYELSSFGYFQRSGVREMINFFSRTFIKRSQAGQRQSIQHEEYTCHVYVKADGLSGIVVTDQEYPPRVAFALLNKLMESYHTELNGSWKSHTGNPK-DWPPLGKAVTDYQDPSKADKISAIQKELDETTAILSKTIDNVLERGEKLDDLVNKSQDLSNQSKVFYKQAKKTNSCCVV 198
BLAST of NO01G03510 vs. NCBI_GenBank
Match: XP_009537159.1 (hypothetical protein PHYSODRAFT_356041 [Phytophthora sojae] >EGZ07593.1 hypothetical protein PHYSODRAFT_356041 [Phytophthora sojae]) HSP 1 Score: 233.4 bits (594), Expect = 6.100e-58 Identity = 118/199 (59.30%), Postives = 148/199 (74.37%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQES-ITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTI 199 MKIVAI L R +P IL++ E+ SFGYFQR+G+REM F S+T +KR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ F D TN TQ S + P+ A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPTILSAGFEVSSFGYFQRSGVREMINFFSRTFVKRTEPGQRQSIQHEEYNCHVYVRRDGLAGIVVCDQEYPPRVAFALLNKLMDEF--DKTNSGWKTQSGSPQEFAPLTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 197
BLAST of NO01G03510 vs. NCBI_GenBank
Match: OWZ21759.1 (Synaptobrevin [Phytophthora megakarya]) HSP 1 Score: 229.6 bits (584), Expect = 8.800e-57 Identity = 112/198 (56.57%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTI 199 MKIVAI L R +P+IL++ E+ SFGYFQR+G+REM F S+T IKR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ + + P+ A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPMILSAGFEVSSFGYFQRSGVREMINFFSRTFIKRTEPGQRQSIQHEEYNCHVYVRRDGLAGIVVCDQEYPPRVAFALLNKLMDEYDKSTGGSWKTQSGNPQEFAPLTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 198
BLAST of NO01G03510 vs. NCBI_GenBank
Match: XP_002904125.1 (synaptobrevin-like protein [Phytophthora infestans T30-4] >EEY54303.1 synaptobrevin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 229.2 bits (583), Expect = 1.100e-56 Identity = 114/199 (57.29%), Postives = 147/199 (73.87%), Query Frame = 0 Query: 1 MKIVAISLHRYQKDTPEPIILTSATELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDI-TNWSSVTQQESITYPPIQEAIREYQDPAKADKITKIRRDLDETTEILHKTIDAVLERGVKLDELVDRSNDLSSQSKLFYKQARKTNSCCTI 199 MKIVAI L R +PIIL+++ E+ SFGYFQR+G+REM F S+T IKR +PGQRQ+IQHEEYN H ++R DGL G V+ D EYPPRVAF LL+ L++ + NW + + + + A+ EYQDP+KADKI+ I+++LDETT +L KTID VLERG KLD+LV +S DLSSQSK+FYKQA+KTNSCC + Sbjct: 1 MKIVAIELLRQDGQGQDPIILSASFEVSSFGYFQRSGVREMINFFSRTFIKRTEPGQRQSIQHEEYNCHVYVRRDGLSGIVVCDQEYPPRVAFALLNKLMDEYDKSTGGNWKTQSGNPQ-EFAALTTALAEYQDPSKADKISAIQKELDETTAVLSKTIDNVLERGEKLDDLVSKSQDLSSQSKVFYKQAKKTNSCCVV 198 The following BLAST results are available for this feature:
BLAST of NO01G03510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03510 ID=NO01G03510|Name=NO01G03510|organism=Nannochloropsis oceanica|type=gene|length=1106bpback to top protein sequence of NO01G03510.1 >NO01G03510.1-protein ID=NO01G03510.1-protein|Name=NO01G03510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bpback to top Synonyms
Publications
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