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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr1 | genome | chr1:553283..554953 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G02180.1 ID=NO01G02180.1|Name=NO01G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=1242bp
CGCACGTCCCACCATCTGATATCCACATCATACACTACACAACTAAGTTT
AGTTCCAGGAGGACGATTAGTGCAGCTTGTCCTGAGAACCATCCGTTCAC
GCCGCCTCCCCAACCCCCAGTTTCCCAAGACCTACAACATGATCCGCGGC
AGTTGGGGACGCGAATGGCGAGGCAGGTCCCTCGTGCTGCTCGTTAGCGT
GCTAGCCTTGTCGTTGTGCGTCTGCCCAGCTCGGGCAAGGCGTGAGTTGG
AAGAAGGTGCATCTCCCTCTACCATCAGCACAAATGACCCCACCGTGGCC
CCCACCCCGTTAGACACAGGCCGCAATAGAGGCAACGAAACCGCCCAGGC
ACCGATCTCACCCACCACGTTAGGCGGAGGTCACAGTGAAGAGAACGAGA
CCACCAAAGCATCGGCATCACCCACCCCTTCCCCAGAAGTGGCGCTGACT
CCAGACGGACCAACCCCGGCCCCTACATTGAAACCAACTTTTGCCCCCAC
ACCCGCGCCGACACCTGCACCAACCCCTCAACCCCCGGTACAATTCTCAA
TCGGCTTCAGTCTTACGATCAGTTTTACTCAGCAGCCACCATCGGACCTG
TATCCAGCCAACTTTGCGGACCATGCCCAGGCGCAAAACGTGATCAAGGA
TGCCCTTTCCCTCGGAGTCACGGTTATTAAACGTGGCGACATTGACAGCG
TCCAAGCTGTGCGTCTCCGTAAACTCGATCTCACACTGCGCATTCAGATT
ACTACCCTCCTCGCCAGCAGCGGCTATTCCGACCCCCTCCAGTTCTATAA
TGGTTTTGTCCGCCAGCTTTACGCAGCCAAACAAGACGGCACTCTCAATA
GATACCTGCAAGCCGCCGCTGTCACCAATGGTGTGTATGCCTTCTCCCAA
GCCTATGTGAAGGCATACACGGTCCCCAATCGGTACATGATCAATGGGGA
AAGTACTTCTGTGGTCATCCCGGTGGGCGATACGGACGAGAAACAGAAGC
AGGGCTTACCTCTAGGCGTGCTAATTCCCTCGGTGCTGGTTACCGTGATG
TTATTTATTGCCATGGCCATGTTTGCTAGACAACGAGCGAGAGTGTTTGA
GCAGCAATTACAGCAACAGCAGCAGTTGGCGGTGATGGGGTTGGTGTCGA
TGGATGACAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGGGGCGGGGGAGAGGAAGGGGAGTTGAGGCGGTCATGA back to topprotein sequence of NO01G02180.1 >NO01G02180.1-protein ID=NO01G02180.1-protein|Name=NO01G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MIRGSWGREWRGRSLVLLVSVLALSLCVCPARARRELEEGASPSTISTND
PTVAPTPLDTGRNRGNETAQAPISPTTLGGGHSEENETTKASASPTPSPE
VALTPDGPTPAPTLKPTFAPTPAPTPAPTPQPPVQFSIGFSLTISFTQQP
PSDLYPANFADHAQAQNVIKDALSLGVTVIKRGDIDSVQAVRLRKLDLTL
RIQITTLLASSGYSDPLQFYNGFVRQLYAAKQDGTLNRYLQAAAVTNGVY
AFSQAYVKAYTVPNRYMINGESTSVVIPVGDTDEKQKQGLPLGVLIPSVL
VTVMLFIAMAMFARQRARVFEQQLQQQQQLAVMGLVSMDDREEEEEEEEE
EEEEEGGGGEEGELRRS* back to topmRNA from alignment at chr1:553283..554953+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G02180.1 ID=NO01G02180.1|Name=NO01G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=1671bp|location=Sequence derived from alignment at chr1:553283..554953+ (Nannochloropsis oceanica)
CGCACGTCCCACCATCTGATATCCACATCATACACTACACAACTAAGTTT
AGTTCCAGGAGGACGATTAGTGCAGCTTGTCCTGAGAACCATCCGTTCAC
GCCGCCTCCCCAACCCCCAGTTTCCCAAGACCTACAACATGATCCGCGGC
AGTTGGGGACGCGAATGGCGAGGCAGGTCCCTCGTGCTGCTCGTTAGCGT
GCTAGCCTTGTCGTTGTGCGTCTGCCCAGCTCGGGCAAGGCGTGAGGTGC
GTACCACCTATGTGTGTGGACTAGGGGAAGCATGGGGGTTTGAGCTTGGC
CCATGCTTGAAAATTGCTACCATACAAATAACCACACTTATCGAGCGGTG
CTCGGGGCCCTTATAACTCAGCCAACGCATCTTTTTGCCTGTTTATAATG
TATGTAGATTGCGCATTCTGCCCACTCACCGCTTCTATCCTTCGCCCTCC
CTCCCAATCCACAGTTGGAAGAAGGTGCATCTCCCTCTACCATCAGCACA
AATGACCCCACCGTGGCCCCCACCCCGTTAGACACAGGCCGCAATAGAGG
CAACGAAACCGCCCAGGCACCGATCTCACCCACCACGTTAGGCGGAGGTC
ACAGTGAAGAGAACGAGACCACCAAAGCATCGGCATCACCCACCCCTTCC
CCAGAAGTGGCGCTGACTCCAGACGGACCAACCCCGGCCCCTACATTGAA
ACCAACTTTTGCCCCCACACCCGCGCCGACACCTGCACCAACCCCTCAAC
CCCCGGTACAATTCTCAATCGGCTTCAGTCTTACGATCAGTTTTACTCAG
CAGCCACCATCGGACCTGTATCCAGCCAACTTTGCGGACCATGCCCAGGC
GCAAAACGTGATCAAGGTACGTGTGTGGGAATGAATGAGAGAAAAATGGA
TTGATTGATCTGAACTCGGTACACATCAATATTCTTGGTTACTTAATTGA
TCACTGTGTAGTCTCCACCCAATCTCAGCTTTTTTTCTGCATAGCTTGTT
CTTTCTCTCTATTACATACGCTTATCACTATACCCATCTTCTGACCCTCT
TCCTTCCCCACATGCCACCCAAAATAGGATGCCCTTTCCCTCGGAGTCAC
GGTTATTAAACGTGGCGACATTGACAGCGTCCAAGCTGTGCGTCTCCGTA
AACTCGATCTCACACTGCGCATTCAGATTACTACCCTCCTCGCCAGCAGC
GGCTATTCCGACCCCCTCCAGTTCTATAATGGTTTTGTCCGCCAGCTTTA
CGCAGCCAAACAAGACGGCACTCTCAATAGATACCTGCAAGCCGCCGCTG
TCACCAATGGTGTGTATGCCTTCTCCCAAGCCTATGTGAAGGCATACACG
GTCCCCAATCGGTACATGATCAATGGGGAAAGTACTTCTGTGGTCATCCC
GGTGGGCGATACGGACGAGAAACAGAAGCAGGGCTTACCTCTAGGCGTGC
TAATTCCCTCGGTGCTGGTTACCGTGATGTTATTTATTGCCATGGCCATG
TTTGCTAGACAACGAGCGAGAGTGTTTGAGCAGCAATTACAGCAACAGCA
GCAGTTGGCGGTGATGGGGTTGGTGTCGATGGATGACAGGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGCGGGGGAGAGGAA
GGGGAGTTGAGGCGGTCATGA back to topCoding sequence (CDS) from alignment at chr1:553283..554953+ >NO01G02180.1 ID=NO01G02180.1|Name=NO01G02180.1|organism=Nannochloropsis oceanica|type=CDS|length=1104bp|location=Sequence derived from alignment at chr1:553283..554953+ (Nannochloropsis oceanica)
ATGATCCGCGGCAGTTGGGGACGCGAATGGCGAGGCAGGTCCCTCGTGCT
GCTCGTTAGCGTGCTAGCCTTGTCGTTGTGCGTCTGCCCAGCTCGGGCAA
GGCGTGAGTTGGAAGAAGGTGCATCTCCCTCTACCATCAGCACAAATGAC
CCCACCGTGGCCCCCACCCCGTTAGACACAGGCCGCAATAGAGGCAACGA
AACCGCCCAGGCACCGATCTCACCCACCACGTTAGGCGGAGGTCACAGTG
AAGAGAACGAGACCACCAAAGCATCGGCATCACCCACCCCTTCCCCAGAA
GTGGCGCTGACTCCAGACGGACCAACCCCGGCCCCTACATTGAAACCAAC
TTTTGCCCCCACACCCGCGCCGACACCTGCACCAACCCCTCAACCCCCGG
TACAATTCTCAATCGGCTTCAGTCTTACGATCAGTTTTACTCAGCAGCCA
CCATCGGACCTGTATCCAGCCAACTTTGCGGACCATGCCCAGGCGCAAAA
CGTGATCAAGGATGCCCTTTCCCTCGGAGTCACGGTTATTAAACGTGGCG
ACATTGACAGCGTCCAAGCTGTGCGTCTCCGTAAACTCGATCTCACACTG
CGCATTCAGATTACTACCCTCCTCGCCAGCAGCGGCTATTCCGACCCCCT
CCAGTTCTATAATGGTTTTGTCCGCCAGCTTTACGCAGCCAAACAAGACG
GCACTCTCAATAGATACCTGCAAGCCGCCGCTGTCACCAATGGTGTGTAT
GCCTTCTCCCAAGCCTATGTGAAGGCATACACGGTCCCCAATCGGTACAT
GATCAATGGGGAAAGTACTTCTGTGGTCATCCCGGTGGGCGATACGGACG
AGAAACAGAAGCAGGGCTTACCTCTAGGCGTGCTAATTCCCTCGGTGCTG
GTTACCGTGATGTTATTTATTGCCATGGCCATGTTTGCTAGACAACGAGC
GAGAGTGTTTGAGCAGCAATTACAGCAACAGCAGCAGTTGGCGGTGATGG
GGTTGGTGTCGATGGATGACAGGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGGGGGCGGGGGAGAGGAAGGGGAGTTGAGGCGGTC
ATGA back to top
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