NO01G02060, NO01G02060 (gene) Nannochloropsis oceanica

Overview
NameNO01G02060
Unique NameNO01G02060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5893
Alignment locationchr1:522406..528298 -

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidyl-prolyl cis-trans isomerase-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:522406..528298 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO:0003824catalytic activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR029000Cyclophilin-like_dom
IPR035542CRIP
IPR024936Cyclophilin-type_PPIase
IPR000504RRM_dom
IPR002130Cyclophilin-type_PPIase_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: EWM29161.1 (peptidyl-prolyl cis-trans isomerase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 641.0 bits (1652), Expect = 3.300e-180
Identity = 313/377 (83.02%), Postives = 344/377 (91.25%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLIDLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRPRGSTKIKSRGKGFKECSESIAALPASTKSRWEGNYSDGRSSR 466
            MSV+LETTLGE VVDL C++CPLAAKNFLKLCK KYYN+VL+YNVQQNFMIQTGDP+GTGRGGTSIYG+LYGEQAK+FEDEIRLPQLKH+RPGLVCMAS GEN+NTSQFYITMRGED+EFLDGKHTIFGEVAEGLDTVLK++NELYCDT+GRPYRDVRILHTYVL+DPF DP G+ DL+P ASP R RP AE+V PRLIDL DEEDGLTAEAL+ERIRE EA KRAVVLEMIGDLPDAEIKPPENVLFVCKLN ITTDEDLEIIFSRFG GVKAEICRD +TGDSLNYAFVEFDDVESCEEAYKKM+NAL+DDRRIKVDFSQSVAKQWN+YTMRPRGSTKIKSRG GF+E S   + L +++ +   GN   GR+ +
Sbjct:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAGFQERSPDASTLLSASSAARAGN-GGGRNGK 376
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: CBJ28541.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 456.1 bits (1172), Expect = 1.500e-124
Identity = 235/377 (62.33%), Postives = 290/377 (76.92%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMAS-GGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRL--IDLVD-EEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRPRGSTKIKSRGKGFKECSESIAALPASTKSRWEGNYSDG 462
            MSV++ET+LGE VVDL CE+ PLAAKNFLKLCK KYYN  L YNVQQNFMIQ GDPT TG+GGTS+YGL+YGEQA+FFEDEI     KH+  GL+ MA+ G  N N SQF+ +MRG+D++ LDGKHT+F +V EG++T L+++N  +CD NGRPYRD+RILHTYVL+DPF DPP +  +VP  SPLR+RP  E V  RL  +D V  E D  T    ++++RE  A+  AVVLEMIGDLPDA++KPPENVLFVCKLN +TTD+DLEIIF+RFG   +AEICRD ITGDSLNYAFVEF+ +ESCEEA+KKM+N LIDDRRI+VDFSQSVAK+W+KY  R +G  K+ S GKG K   +     P    ++ +G+ S G
Sbjct:   12 MSVMIETSLGEVVVDLFCEDAPLAAKNFLKLCKIKYYNGCLFYNVQQNFMIQAGDPTATGKGGTSVYGLMYGEQARFFEDEISATSRKHDEAGLLSMANMGVPNSNGSQFFFSMRGDDMQHLDGKHTVFAKVMEGMET-LEEINGQFCDDNGRPYRDIRILHTYVLDDPFDDPPQL--VVPDESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQLREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGT-CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLAS-GKGGKPAQQ-----PQQNNTQRDGHASGG 378
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: GAX95590.1 (peptidyl-prolyl cis-trans isomerase-like protein [Pythium insidiosum])

HSP 1 Score: 440.3 bits (1131), Expect = 8.600e-120
Identity = 222/337 (65.88%), Postives = 263/337 (78.04%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVLLETTLGE V+DL  ++CP+A  NFLKLCK KY+NNVL +NVQ+NFM+Q+GDPTGTGRGG S+YG LYGEQA+ FEDEIR P LKH + GLV MA+ G N N SQFYIT R  DLE+LDGKHTIFGEVAEG D VL  +N LY D + RPY+DVRI HTY+LEDPF DPP +   VP +SP RERP  ETV+ R+   + +DE++G T E ++  +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFGP  K+E+ RD  TGDSL YAF+EF D   CEEAY KM+N L+DDRRIKVDFSQSV+K WNK+  RP
Sbjct:    1 MSVLLETTLGEIVIDLXVDDCPIATTNFLKLCKIKYFNNVLFFNVQENFMVQSGDPTGTGRGGMSLYGHLYGEQARCFEDEIR-PHLKHCKKGLVGMANSGPNTNVSQFYITTRDNDLEYLDGKHTIFGEVAEGFD-VLDKINALYVDKDYRPYQDVRIKHTYILEDPFPDPPLLE--VPPSSPTRERPEEETVEVRVAADERLDEDEGRTEEEIEASLREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESSDLDMAFCRFGP-CKSEVIRDYKTGDSLCYAFIEFQDKRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKFKRRP 332
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: CCA17594.1 (peptidylprolyl cistrans isomeraselike protein putati [Albugo laibachii Nc14])

HSP 1 Score: 426.0 bits (1094), Expect = 1.700e-115
Identity = 212/350 (60.57%), Postives = 265/350 (75.71%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLIDLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRPRGSTKIKSRGKGFKE 439
            MSVLL TTLG+ V+DL  +ECP+A  NFLKLCK KYYNNVL +NVQ+NFMIQTGDPTGTG+GG S+YG LYG QA FF+DE R PQLKHNR G V MA+ G N NTSQFYIT   ++LE+LDGKHTIFG VAEG+D ++  +N+L+ D + RPY+DVRILHT++L+DPF DP       PA+SP R+RP  E+V  R+    + ED  TAE +++ +RE EAK RAVVLEMIGD+PDA+IKPPE VLFVCKLN +T   DL++ F RFG   K+E+ RD  TGDSL YAFVEF + + CEEAY KM+N L+DDRRIKVDFSQSV+K WN+++ + + S    ++  G  +
Sbjct:    1 MSVLLATTLGDIVIDLFTQECPIACTNFLKLCKMKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSLYGQLYGAQAHFFQDEFR-PQLKHNRKGTVAMANTGPNTNTSQFYITTHNDNLEYLDGKHTIFGHVAEGID-IIDKINQLFVDKDFRPYQDVRILHTFILDDPFPDPKNFQ--TPASSPTRDRPEEESVPVRMAADEEPEDERTAEEIEKSVREKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFG-ACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQFSRKNKKSRVDDNQASGHSQ 345
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: CCI39515.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 420.2 bits (1079), Expect = 9.200e-114
Identity = 209/334 (62.57%), Postives = 256/334 (76.65%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLIDLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMR 423
            MSVLL TTLG+ V+DL  +ECP+A  NFLKLCK KYYNNVL +NVQ+NFMIQTGDPTGTG+GG S+YG LYG QA FF+DE     LKHNR G V MA+ G N NTSQFYIT   E+LE+LDGKHTIFG VAEG++ ++  +NEL+ D + RPY+DVRILHTY+L+DPF DP       PA+SP R+RP  E+V  R+    + EDG TAE +++ +R  EAK RAVVLEMIGD+PDA+IKPPE VLFVCKLN +T   DL++ F RFG   K+E+ RD  TGDSL YAFVEF + + CEEAY KM+N L+DDRRIKVDFSQSV+K WN+++ +
Sbjct:    1 MSVLLSTTLGDIVIDLFTQECPIACTNFLKLCKLKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSMYGQLYGAQAHFFQDEFH-SNLKHNRKGTVAMANTGPNTNTSQFYITTSHENLEYLDGKHTIFGHVAEGIE-IIDKINELFVDKDYRPYQDVRILHTYILDDPFPDPKNFQ--APASSPARDRPEEESVPVRVAADEEPEDGRTAEEIEKSVRAKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFG-ACKSEVIRDYKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQFSRK 329
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: OWZ04366.1 (Peptidyl-prolyl cis-trans isomerase [Phytophthora megakarya])

HSP 1 Score: 420.2 bits (1079), Expect = 9.200e-114
Identity = 213/341 (62.46%), Postives = 259/341 (75.95%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLK----HNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVL+ETTLG  V+DL  E+ PLA  NFLKLCK KYY+  L +NVQ+NFM+QTGDPT TG GG SIYG LYG QA+FFEDE  LP++K     +R GLV MASG  N+N SQFYIT R ED+ +LD +HTIFGEVAEG+D VL  +N L+ D + RPY+DVRI HTYVL+DPF DP G+ +L+P +SP RERP  E V+PRL   + +DE +G T + +++ +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFG   K+E+ RD  TGDSL +AFVEF D + CEEAY KM+N L+DDRRIKVDFSQSV+K WNK   RP
Sbjct:    1 MSVLVETTLGTIVLDLFVEDAPLACTNFLKLCKTKYYHGCLFFNVQENFMVQTGDPTATGAGGDSIYGKLYGTQARFFEDE--LPKIKGRSHEDRSGLVGMASGSSNQNASQFYITTRAEDMAYLDEQHTIFGEVAEGMD-VLDQINSLFVDKDYRPYQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFG-SCKSEVIRDQKTGDSLCFAFVEFTDRKDCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: ETI42829.1 (hypothetical protein F443_12119 [Phytophthora parasitica P1569])

HSP 1 Score: 418.3 bits (1074), Expect = 3.500e-113
Identity = 212/341 (62.17%), Postives = 258/341 (75.66%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLK----HNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVL+ETTLG  V+DL  E+CPLA  NFLKLCK KYY+  L +NVQ+NFM+Q GDPT TG GG SIYG LYG QA+FFEDE  LP+ K     +R GLV MAS   N+N SQFYIT R ED+ +LD +HTIFGEVAEG+D VL ++N L+ D + RP++DVRI HTYVL+DPF DP G+ +L+P +SP RERP  E V+PRL   + +DE +G T + +++ +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFGP  K+E+ RD  TGDSL +AFVEF D   CEEAY KM+N L+DDRRIKVDFSQSV+K WNK   RP
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: ETK82856.1 (hypothetical protein L915_11837 [Phytophthora parasitica])

HSP 1 Score: 418.3 bits (1074), Expect = 3.500e-113
Identity = 212/341 (62.17%), Postives = 258/341 (75.66%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLK----HNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVL+ETTLG  V+DL  E+CPLA  NFLKLCK KYY+  L +NVQ+NFM+Q GDPT TG GG SIYG LYG QA+FFEDE  LP+ K     +R GLV MAS   N+N SQFYIT R ED+ +LD +HTIFGEVAEG+D VL ++N L+ D + RP++DVRI HTYVL+DPF DP G+ +L+P +SP RERP  E V+PRL   + +DE +G T + +++ +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFGP  K+E+ RD  TGDSL +AFVEF D   CEEAY KM+N L+DDRRIKVDFSQSV+K WNK   RP
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: ETL36234.1 (hypothetical protein L916_11764 [Phytophthora parasitica] >ETP12575.1 hypothetical protein F441_12080 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 418.3 bits (1074), Expect = 3.500e-113
Identity = 212/341 (62.17%), Postives = 258/341 (75.66%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLK----HNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVL+ETTLG  V+DL  E+CPLA  NFLKLCK KYY+  L +NVQ+NFM+Q GDPT TG GG SIYG LYG QA+FFEDE  LP+ K     +R GLV MAS   N+N SQFYIT R ED+ +LD +HTIFGEVAEG+D VL ++N L+ D + RP++DVRI HTYVL+DPF DP G+ +L+P +SP RERP  E V+PRL   + +DE +G T + +++ +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFGP  K+E+ RD  TGDSL +AFVEF D   CEEAY KM+N L+DDRRIKVDFSQSV+K WNK   RP
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337
[Close]
BLAST of NO01G02060 vs. NCBI_GenBank
Match: ETL89459.1 (hypothetical protein L917_11622 [Phytophthora parasitica])

HSP 1 Score: 418.3 bits (1074), Expect = 3.500e-113
Identity = 212/341 (62.17%), Postives = 258/341 (75.66%), Query Frame = 0 
Query:   89 MSVLLETTLGEFVVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRGGTSIYGLLYGEQAKFFEDEIRLPQLK----HNRPGLVCMASGGENKNTSQFYITMRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHTYVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLI--DLVDEEDGLTAEALDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLEIIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALIDDRRIKVDFSQSVAKQWNKYTMRP 424
            MSVL+ETTLG  V+DL  E+CPLA  NFLKLCK KYY+  L +NVQ+NFM+Q GDPT TG GG SIYG LYG QA+FFEDE  LP+ K     +R GLV MAS   N+N SQFYIT R ED+ +LD +HTIFGEVAEG+D VL ++N L+ D + RP++DVRI HTYVL+DPF DP G+ +L+P +SP RERP  E V+PRL   + +DE +G T + +++ +RE EAK RAVVLEMIGDLPDA++KPPE VLFVCKLN +T   DL++ F RFGP  K+E+ RD  TGDSL +AFVEF D   CEEAY KM+N L+DDRRIKVDFSQSV+K WNK   RP
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337
The following BLAST results are available for this feature:
BLAST of NO01G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29161.13.300e-18083.02peptidyl-prolyl cis-trans isomerase-like protein [... [more]
CBJ28541.11.500e-12462.33conserved unknown protein [Ectocarpus siliculosus][more]
GAX95590.18.600e-12065.88peptidyl-prolyl cis-trans isomerase-like protein [... [more]
CCA17594.11.700e-11560.57peptidylprolyl cistrans isomeraselike protein puta... [more]
CCI39515.19.200e-11462.57unnamed protein product [Albugo candida][more]
OWZ04366.19.200e-11462.46Peptidyl-prolyl cis-trans isomerase [Phytophthora ... [more]
ETI42829.13.500e-11362.17hypothetical protein F443_12119 [Phytophthora para... [more]
ETK82856.13.500e-11362.17hypothetical protein L915_11837 [Phytophthora para... [more]
ETL36234.13.500e-11362.17hypothetical protein L916_11764 [Phytophthora para... [more]
ETL89459.13.500e-11362.17hypothetical protein L917_11622 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008137NSK008137Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02060.1NO01G02060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576490gene_190Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02060.1NO01G02060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02060 ID=NO01G02060|Name=NO01G02060|organism=Nannochloropsis oceanica|type=gene|length=5893bp
GGGGTATTCAGGGGAGGTTGACTATTTCGGAGGGGATAAGATTGTAGTGT
GATGCTCTGTATCACAGCCTCAGTCCAATGTGGAATCGATATGCGCTCTA
GTTCATCAAGGAATAGGGAGTACTGGGCACCATGGCTTTCCAAAAGTCGT
AGGGTAAAGCTTCCGCGGCGCCCGTCCGTTTGGAGCGAATTAACGGGGAT
CATTGATGCTTTCGGGGCCGTCTTGATTGTCCTCACCAGCACACGCTTCG
CTATTCATAATGGACTGATGCTTACATCACGTCCCATATACACAACACAG
GCACGCTACACCGTCATGTCGGTGCTGCTGGAGACGACGCTCGGGGAGTT
CGTGGTGGACCTGATGTGCGAAGAGTGTCCCTTGGCGGCGAAGAATTTCC
TTAAGCTCTGCAAGGCAAAGTACTACAACAATGTCCTCATCTACAATGTG
CAGCAGAACTTTATGATTCAGACGGGGGATCCCACGGGCACAGGCCGCGG
GGGTACGTCGATTTATGGCTTGTTGTACGGGGAGCAGGCCAAGTTCTTCG
AGGACGAGATCCGCCTGCCCCAGCTCAAGCACAACCGGCCCGGCTTGGTG
TGCATGGCCTCGGGTGGGGAGAATAAAAACACGTCGCAATTCTACATCAC
CATGCGGGGTGAAGATCTTGAATTTTTGGACGGGAAACACACAATATTCG
GAGAAGTGGCTGAGGGCCTAGACACGGTCCTCAAAGACATGAACGAGCTG
TACTGTGATACGAACGGTCGGCCTTACCGGGACGTACGCATCCTTCATAC
CTACGTGCTCGAAGATCCGTTCATTGATCCCCCAGGCATGGCAGACTTGG
TGCCTGCCGCCTCACCTTTGCGGGAACGGCCGATAGCAGAGACAGTGAAG
CCTCGGCTGATCGATTTGGTGGACGAAGAAGATGGGCTGACAGCCGAGGC
CTTGGACGAACGCATCCGAGAAGCGGAGGCAAAGAAGCGGGCAGTGGTCC
TGGAGATGATTGGTGACTTACCCGACGCGGAGATCAAGCCGCCAGAAAAT
GTGCTCTTTGTGTGTAAACTTAATGCCATTACCACGGACGAGGATTTGGA
AATTATTTTCAGCCGGTTTGGGCCGGGGGTCAAGGCAGAAATTTGCCGGG
ATGCCATCACTGGTGACTCGCTCAATTACGCATTTGTCGAATTTGATGAC
GTTGAAAGCTGCGAGGAGGCTTATAAGAAGATGGATAACGCTTTGATTGA
TGATCGGCGCATCAAGGTGGACTTCTCGCAGTCGGTTGCGAAGCAATGGA
ATAAATACACGATGCGGCCGAGAGGGAGCACTAAAATTAAAAGTCGCGGG
AAAGGGTTCAAGGAATGTAGTGAATCTATCGCAGCTTTGCCGGCATCGAC
GAAGAGTCGATGGGAGGGAAATTATAGTGATGGGCGTAGCAGTAGAAAAG
AAGACAGGAAGCGCTCCCGCACATCACCTTCTCCGCCTCCTCCTCGCAAG
CCCCGCTCTCGATCACGCTCTCGTGAGAGGTGGGATAAATATAGCGAGCG
ACATGGTGGTTATGGTGGTGGTGACCGGAGAGAAAGAGGTAGGAGCAAAA
GCGGCAGGAGCCGCCGTCGGTCCTCTTCAAGGTAGGAAGACGAGGGCAAG
CAAATGCTAATTCCTTGTATAGAGAGTGGCACTGTGCAATCCATGTGTAT
GTACTGTCCAGGCACGGTGTTACCTGTGGGGATGCGAGAGAGGCAATGCT
GGGCCAGGAATGTGAAGGAAAAGATGGGTCAGTCACACTGCAGATGCGAA
TAGTGGAAAGGTCCCGTTGGCGTGCTTGCGCATCACCGGCGTTGTGTGGC
ATATGATGCCACATCTTGGCACCCGTATTCCTCTATAGCTCTTCTTGGCT
GGTACGAGATATTATTGCAGgtacgtgtccgtgggggctggcgggggagg
ggggttatcctgctcgattgtatgaaacttttgggactgccgcatgatcc
cccttctgaaagtagaggagtatgcttcttaaaggcagagaagtatgctt
cttgaaggcgaggatctgtatgcccttgacatagcacaagcctccggtcc
cataatcgaaagatttaccaagggcaacactttcgttttcagtaccaatc
ttccacctttccctacctcactccctacagGATGGACGCAAGATTACAGC
GACAAAAAAAAAGAGCCTTCTTTCTGCGCCTCCATTTCTCTCCCTCCCTT
CCTGCTGACGTCTTTCGGGGAGAAGCTACAGAAGGAGGAGGGAGGTTGCA
GCTTAGCTCCAATGCGTGACTGGGTGACCCTCTGGCTTTCTCTCATGTCT
TCTGGTGTTTCCCTGGAGGATTACCACCTGAAGGAAACGAGAGTCATGTG
GTCCAGCCTTAGGCTCACCGGAAGAATGGAGTAGAGCAGTCTATTTTTTC
TCCTTTCTTTCCCTCCTCCCTCCCGCATTATTTCCCTCTTCTTGGGACAT
AAGATTCAACTGTAAACAAATAAGAAGAGCATTCGACGATGACGCAAGAA
ATTTTTAATAAGCACTTCCTCGGATTCCCTGTCGCTCTGATTTTTCTTTA
CAGATCAAATAGTAAGGCTGTATCAAAAACAAAAGTCACACACAGCGTTA
CCCCTTGGACATCTTCTCTCTCTCCCACTCCTCCTCTCTTCACTCCCCGT
ACACTCTCTCGTTATGACCCCTTATTCCATGCTTTAATCGTTGTACTACC
ATCCGCCCGTCGGCGGAACACAAAATAGGAATCAGACGACTGCCCTTTCA
TCACGCGGGTGTCTTGATCCAAATACAACAGCTCACACCGATTCAAAACC
CTTACACCTTTCCACCCCGTCTCAATTCGTTCATTCATAAAGCCGTACTT
GATCGTCGCTGGCAACACATCCATGATCAAACATAGCTCTCCATCCATGA
TCGAAACGACGTCTTTCAATTCCCACGCACCCTCCACCACCACGTCCAAC
TCCCTCCCCAATGTCTTCAGCTTCTCCGTATACACTGTCTCAAACGCATA
TCCATTTACCGCAATCGACTGCCGAAACGCCACAAATTCTGCCTGCGGCA
ATGACTTGCCCAGCCCGCTCAATCCCCGATTATACCTCATTGTCCTCGAT
GTGCTATATGCCAAATCCCAATCCCCCTCCATCGCCTTCTGCAACTCTGC
AATCTCCAACTCGTCCTGCACAGCCAAGTTAGCGTCTTCTTCTATCATGG
CCTCCACCAACGCCGCCACATATTCATCTGTCGCCTTATCGTCATCCAAC
AACCCGGCAAATTTAATCGACCCCAGCACTTCCAAGAGCTGGGGCTTCGC
CGGGCCCACCACCTGCATCGCCTCCGGCTCCTCCGCCTTGCTCTGCGCCG
CCGCCGCCGCTTCGAACATCGCTGCAGCCGTCTGCCGAGCCGGCGCCGAT
TCTGGGGCCACTCGTGCTGCCTCTGCTGCTGCTACTGTATCCCAATCTTC
TTCCTCCATGAATAAGTCATCCAAGTCAGAAGATAGAGCTTTGAAGCCTT
CGAAATTGATAGCGAGCTCGCCTCGTGCGACATTGTCCCACATTGCTTTC
ACCTCTTCTCGAGAGATGAGCTCTTCCGCCATCAATGCAGGGAGCTCGTT
TGTCTTCAAAAAGGTCATGTAATCCATTTTACTATTCAAAGGCCCGCCCA
TCGCTGCCGTATACTCTGCCCAGAGTTCTGCATCTTCTGCAGACGCCGCG
GGGGGAGGAGGGACGGAGGCACGCTCCGCTGCTGCTTCTTCGATCATTTC
TGGAGAGTCCTTCTCCTCGTCCTCAAAAAGTTCCTCGATCTTTGCATATA
CCCTCAGAGTGGCTTCGCGGGACAAGCGTGGAAGCAAAGGGCCACCACTG
GTGCTGATAATGCTGCTGCTGCTGGTGCTCGATTCCACCCCTGCCTCGGC
CCGCCAGAATCCGATGACCTCCTCTTTGGTGACCAAGTCCTCTTCTAAGT
ATCGAGCCACGTCTGCCGAGGCCATAAATTCGTCCACCAACATCCCTCCC
ACAATTGGTGCGGCTGTCGCAGCAGCAGCAGCAGAAGCAGCTGCTGTGGT
AAGAGACTGCACCACCGCCCCAACAGGCGGAGCCGACTTGACTTGGTCAA
CCACCTGCTGCTCTTCCTCTTCTTCTACCTCTTCTTCCTCCTCACCATCC
TCAAACAATGCATCAATCCTATCGTAGACTGCAAGAAACCCCTCAAGGTC
CGCCATCTCGTCCGTATCCCCCACCTCTCCCATCCAAAACGAATCCACCT
CCGTCTTTGCCAGCAGCTTCTCCTTCAACAATTCCGCGACCTCTCCACTT
GTATAAAAGGCAGATAAGGACACAAAATATAAGCCTTGGGTCTTCAGTGC
CAGTCGTCGGAATTCAGCCTCCAGTGCACTTCTTCTCCGAGGACTCATTG
TGGCCTTGTTGGCTTCCTTGGCAGCGGTAGCATGCAGGAGCAGAAGAGAG
GGAGGGTGAGGGGCGGTGATTGCCGTCGTGGTGGGACAGGCTACAAATAT
AGATGAAGAACTATCACGACATTTTATTCCGCCTGCTGGTGATAGCGGTG
AGGAAAATGATGCTGCCGTCGTCATGGGCCTTGAGATTGCGGGTTTGGAG
GAGAGGAAGAAGGCTAGAGTAGTCGAAGGGGCGAAGAGGAATAGCGCGGC
TGCCGTAGTGACGGCTGTGCGGATAGCTAGTCCGGCCGCATCCATCGATG
CACGCCGTCTGCTGTTATCCATGTTGTCCCTATGTGCGTGTGCGGTGGCG
TGAACGGGGTGAAACACTAAGGGTTTGGATGAGTTAAAGATAGGGTATAA
AATGACAAAATGGAGAGAAGGCCAAAATCCAGCGGCAGCACCCAGAGGAT
GCATATCCATGGACAGTAGAAAATCTGGCTCTTTCAACGATTTATTTAGG
CAGCAGTAGAGGCTTCTTCCCCCGCTGCGTTCATGCAAATGGACGCAGTC
ACTGCTGTGGATACACGGATGGCGGCGTGTCCCGCAAACTTTCAAGGAAA
GCGCCTTGCCAAGCCAAATGCATCATTCTGTCAACATGATGATGAGAAGA
CGGTCAATCTCAAGGGGGAAAGAGTATGCGACGCCGCAGTGGAGGGGGGC
TCGGCAAGCAGGAATGCTCGACGAGGCACGCAAAAAAGACTCAATGCCGG
CCAGTGCCACCGATTGCGGTGATGCCTATCACGCTATTGGACTTCCGGTC
GCTATGGCATGACATCCGCCTATTCGCTGCCCTTTCTCATCTCATAAGCC
GTTGTGTGTAGACCAGTTTTGAGGGGGCCGTGGCTTGAAGAACATTTTGG
GCAGCATCATCATTTGCCTATGTTGCTGCTGAAGAGCGTCCGCATGCGAT
GCTGGAAACAAACGCGTCGAGACGCGAGGAGGAAAGAGGGCGCAACTTAT
TTGCACTCCACGTGGTTGACTTGGTACCTGTTATTGTGCGGTGTTGTTAT
GCTCGTGTCGTTGCTTTCGTGTCGCGCTACTGGATGAATATCATTTGTGG
GGTCGTTATTGTATTTCGCTGACTTGTTTTTGTTTTGAGTGCATCCTCCT
GGAGCATTTCTCCCAATACCAGCCAAAGCAGGTCGGCCCTCTCCTGTGCA
GGGCAACACACTGCCATGGGCAGGGCGCTCAGGTCTTGTGCTTTTGAACC
ATTTCGGGGCTCCTGCGGCTCTGACACAATATCGTGACTTTCAATCGACC
TCCCCGCAGCGCACAGCCAGTTGTGTGCATTGCTCTGAGCTAATTTGACT
CCTTTTTTCACATTCAGGCCTCGCCACTCGTCTGGAAAATTCTCATAAAC
TTTATTGTCACTATAAACATGCTTTTTGTGTCTGGAAACCTAA
back to top

protein sequence of NO01G02060.1

>NO01G02060.1-protein ID=NO01G02060.1-protein|Name=NO01G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=528bp
MLCITASVQCGIDMRSSSSRNREYWAPWLSKSRRVKLPRRPSVWSELTGI
IDAFGAVLIVLTSTRFAIHNGLMLTSRPIYTTQARYTVMSVLLETTLGEF
VVDLMCEECPLAAKNFLKLCKAKYYNNVLIYNVQQNFMIQTGDPTGTGRG
GTSIYGLLYGEQAKFFEDEIRLPQLKHNRPGLVCMASGGENKNTSQFYIT
MRGEDLEFLDGKHTIFGEVAEGLDTVLKDMNELYCDTNGRPYRDVRILHT
YVLEDPFIDPPGMADLVPAASPLRERPIAETVKPRLIDLVDEEDGLTAEA
LDERIREAEAKKRAVVLEMIGDLPDAEIKPPENVLFVCKLNAITTDEDLE
IIFSRFGPGVKAEICRDAITGDSLNYAFVEFDDVESCEEAYKKMDNALID
DRRIKVDFSQSVAKQWNKYTMRPRGSTKIKSRGKGFKECSESIAALPAST
KSRWEGNYSDGRSSRKEDRKRSRTSPSPPPPRKPRSRSRSRERWDKYSER
HGGYGGGDRRERGRSKSGRSRRRSSSR*
back to top
Synonyms
Publications