NO01G01340, NO01G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01340 vs. NCBI_GenBank
Match: EWM29086.1 (3-oxoacyl-(acyl-carrier-protein) reductase [Nannochloropsis gaditana]) HSP 1 Score: 406.4 bits (1043), Expect = 6.700e-110 Identity = 207/258 (80.23%), Postives = 228/258 (88.37%), Query Frame = 0 Query: 1 MASHP-STEEAATKKIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 MASH +T+E A +K+A+VTGAAGTLGESIT MLL EGY+VAALD R EGL+ + LD K+D+ H F VDISSA AVEEVC TILTR GAVSVL+NNAGLLS +KCV+T+L EW RV+HVN+DGAF LSQQLLPCMR MH+GRIVNITSMAAKTGGVTAGTAYAVSKGAL+SLTFSLARETA DGITVNG+APAYVKTPMVM QL EEQR QVL +IPVGRFCE EEVAHTVRFLISPLAGFITGE+IDQNGGYHMD Sbjct: 1 MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_093375357.1 (SDR family NAD(P)-dependent oxidoreductase [Variovorax sp. OV329] >SFM02014.1 3-oxoacyl-[acyl-carrier protein] reductase [Variovorax sp. OV329]) HSP 1 Score: 282.7 bits (722), Expect = 1.100e-72 Identity = 147/244 (60.25%), Postives = 183/244 (75.00%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGAAGT+G + TR LL++G VA +D + + LA L L + A FT DI+ AV E ++ FG + +LVNNAG+LS NKC T+ AEWRRV+ VNLDGAF L+QQ+LP M+ GRI+N S+AAKTGG+TAGTAY+VSKGAL+SLTFSLARE A G+T NGI+PAYVKTPM+ +QL+E QR+ +L +IPVGRFCE EE AH VRFL SPLAGFITGE+ID NGG MD Sbjct: 17 RVALVTGAAGTMGLAATRALLEDGCRVALVDVQRDRLAALADSLGEHA---AAFTFDIADPQAVREGHAQVVRAFGPIDILVNNAGILSNNKCEATDAAEWRRVLSVNLDGAFHLAQQVLPGMKARRAGRIINTCSLAAKTGGLTAGTAYSVSKGALTSLTFSLARELAPFGVTANGISPAYVKTPMITEQLSEAQRQALLKDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDLNGGLLMD 257
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_074578427.1 (SDR family NAD(P)-dependent oxidoreductase [Polaromonas sp. JS666] >SDN66102.1 3-oxoacyl-[acyl-carrier protein] reductase [Polaromonas sp. JS666]) HSP 1 Score: 281.2 bits (718), Expect = 3.300e-72 Identity = 143/244 (58.61%), Postives = 181/244 (74.18%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K+A+VTGAAGT+G ++ + LL++G VA +D E G R D+ R F+ DIS A AV + I+ FG V +LVNNAG+LS NK T EWRRV+ NLDGAF+L+QQ++P M+ +GRI+N +S+AAKTGG+TAGTAY+VSKGA+SSLTFSLARE A G+T N +APAYVKTPM+ +QL EEQR+++L +IPVGRFCE EE AH VRFL SPL+GFITGE+ID NGG MD Sbjct: 7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVNHE---GNRALADELGSRASAFSFDISDAAAVSDGHALIVKAFGPVDILVNNAGILSNNKVEATEAGEWRRVLGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSSLTFSLARELAPFGVTANAVAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247
BLAST of NO01G01340 vs. NCBI_GenBank
Match: PIE36552.1 (3-oxoacyl-ACP reductase [candidate division KSB3 bacterium]) HSP 1 Score: 279.3 bits (713), Expect = 1.200e-71 Identity = 142/247 (57.49%), Postives = 179/247 (72.47%), Query Frame = 0 Query: 11 ATKKIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 +T KIA+VTGAAG LG++I + L +EG + D E L + L +P DIS V+ ++ G + VLVN+AG+LS NK T EW+RV+ VNL+GAF+LS+ +LP M+ +GRIVNITS+A+KTGG+TAGTAY+ SKGA++SLTFSLA ETA GIT NGIAPAY+KTPMV +QLTEEQR+++L IPVGRFCEAEE AHTV+FL+SPLAGFITGE+IDQNGG D Sbjct: 2 STPKIALVTGAAGVLGKAIAKSLAEEGMRIVVADIAQEPLNAVSQELPGDT---YPIAFDISDPKQVDAAMEKVMKEVGEIDVLVNSAGILSNNKAETTTPEEWQRVMQVNLNGAFYLSRAVLPAMKKKRWGRIVNITSLASKTGGITAGTAYSTSKGAMNSLTFSLAAETAPYGITANGIAPAYIKTPMVTEQLTEEQRQELLKKIPVGRFCEAEECAHTVKFLVSPLAGFITGEIIDQNGGLMFD 245
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_007873734.1 (SDR family NAD(P)-dependent oxidoreductase [Polaromonas sp. CF318] >EJL78850.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase [Polaromonas sp. CF318]) HSP 1 Score: 278.9 bits (712), Expect = 1.600e-71 Identity = 142/244 (58.20%), Postives = 181/244 (74.18%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K+A+VTGAAGT+G ++ + LL++G VA +D E RT D+ R F+ DIS AV + ++ FG V +LVNNAG+LS NK T AEWRRV+ NLDGAF+L+QQ++P M+ +GRI+N +S+AAKTGG+TAGTAY+VSKGA+SSLTFSLARE A G+T N +APAYVKTPM+ +QL EEQR+++L +IPVGRFCE EE AH VRFL SPL+GFITGE+ID NGG MD Sbjct: 7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVSHE---RNRTLADELGPRAQAFSFDISDPTAVSDGHALVVKAFGPVDILVNNAGILSNNKVEATEAAEWRRVLGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSSLTFSLARELAPFGVTANAVAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_028250322.1 (SDR family NAD(P)-dependent oxidoreductase [Variovorax sp. URHB0020]) HSP 1 Score: 278.9 bits (712), Expect = 1.600e-71 Identity = 149/244 (61.07%), Postives = 180/244 (73.77%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K+A++TGAAGT+G + R LL++G VA +D E L +L AD L PF DIS A AV I+ G V VLVNNAG+LS NK T+ AEWRRV+ VNLDGAF+LSQQ++P M+ GRI+N S+AAKTGG+TAGTAY+VSKGAL+SLTFSLARE A G+T NGI+PAYVKTPM+ +QLTE QR+ +L +IPVGRFCE EE AH VRFL SPL+GFITGE+ID NGG MD Sbjct: 12 KVALITGAAGTMGLAAARFLLEDGCRVALVDANRERTFALAEQLG--ADAL-PFCFDISEAAAVRNGHAQIVEALGPVDVLVNNAGILSNNKSEATDAAEWRRVLAVNLDGAFYLSQQVVPSMKARRAGRIINTCSLAAKTGGLTAGTAYSVSKGALTSLTFSLARELASFGVTANGISPAYVKTPMITEQLTEAQRQALLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 252
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_077592614.1 (SDR family NAD(P)-dependent oxidoreductase [Polaromonas sp. A23] >OOG44915.1 3-oxoacyl-ACP reductase [Polaromonas sp. A23]) HSP 1 Score: 278.1 bits (710), Expect = 2.800e-71 Identity = 145/244 (59.43%), Postives = 182/244 (74.59%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGAAGT+G + TR+LL++G VA +D A R + + PF+ DIS AV+E I+ G+V VLVNNAG+LS NK T AEWRRV+ NLDGAF+LSQQ++P M+ +GRI+N +S+AAKTGG+TAGTAY+VSKGA+S+LTFSLARE A G+T N IAPAYVKTPM+ +QL EEQR+++L +IPVGRFCE EE AH VRFL SPLAGFITGE+ID NGG MD Sbjct: 11 RVALVTGAAGTMGAAATRVLLEDGCKVAMVDFSE---ARNRVLAAEFGENAMPFSFDISDVEAVQEGHAWIVQALGSVDVLVNNAGILSNNKVEATTPAEWRRVLGANLDGAFYLSQQVVPAMKSRGFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELASFGVTANAIAPAYVKTPMITEQLNEEQRQKLLRDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDLNGGLLMD 251
BLAST of NO01G01340 vs. NCBI_GenBank
Match: OUR75429.1 (3-oxoacyl-ACP reductase [Alphaproteobacteria bacterium 46_93_T64]) HSP 1 Score: 278.1 bits (710), Expect = 2.800e-71 Identity = 136/244 (55.74%), Postives = 178/244 (72.95%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 KIA+VTGAAG LGE++ R + +G V D L+ L + L D P D+S A + C I +GA +LVNNAG+LS NK ET++ EWRRV+ +NLDGAF++S++LLP M+ +GRI+NI S+AAKTGG+TAGTAY SKG +++LTFSLARE A DG+TVNGI+PAY+ TPMVM+QL+E QR+++L +IPV RFCE +EVAH V FL SP++GFITGE+ID NGG H+D Sbjct: 7 KIAVVTGAAGVLGEAVVRRFVAQGIKVVMSDINGSHLSDLHSEL---GDATMPLVFDVSDDNAASKACEKIRENWGAPDILVNNAGILSNNKVAETSVEEWRRVMSINLDGAFYMSRELLPAMKSKKWGRIINICSLAAKTGGITAGTAYTTSKGGMTALTFSLAREAAADGVTVNGISPAYINTPMVMEQLSEAQRQELLNSIPVKRFCEGDEVAHVVSFLTSPMSGFITGEVIDINGGLHLD 247
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_105262206.1 (SDR family NAD(P)-dependent oxidoreductase [Rhodoferax sp. TS-BS-61-7] >PQA76806.1 3-oxoacyl-ACP reductase [Rhodoferax sp. TS-BS-61-7]) HSP 1 Score: 276.2 bits (705), Expect = 1.100e-70 Identity = 146/254 (57.48%), Postives = 184/254 (72.44%), Query Frame = 0 Query: 7 TEEAATKKIAIVTGAAGTLGESITRMLLDEGYLVAALD---NRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 T + K+A+VTGAAGT+G + R+LL++G VA +D R + LA D+ F+ DIS A AV+E I+ G V +LVNNAG+LS NK T+ EWRRV+ NLDGAF+LSQQ++P M+ +GRI+N +S+AAKTGG+TAGTAY+VSKGA+S+LTFSLARE A G+T N IAPAYVKTPM+ +QL EEQR+++L +IPVGRFCE EE AH VRFL SPLAGFITGE+ID NGG MD Sbjct: 4 TAKVLLGKVALVTGAAGTMGLAAVRVLLEDGCKVALVDFNHARNKALA------DELGPNAAAFSFDISDAEAVQEGHARIVQTLGTVDILVNNAGILSNNKVEATDAQEWRRVMGANLDGAFYLSQQVVPAMKAQRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELASFGVTANAIAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDINGGLLMD 251
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_092129938.1 (SDR family NAD(P)-dependent oxidoreductase [Polaromonas sp. YR568] >SFU73599.1 3-oxoacyl-[acyl-carrier protein] reductase [Polaromonas sp. YR568]) HSP 1 Score: 275.8 bits (704), Expect = 1.400e-70 Identity = 143/244 (58.61%), Postives = 180/244 (73.77%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K+A+VTGAAGT+G ++ + LL++G VA +D E L L A PF+ DIS AV E I+ FG V +LVNNAG+LS NK T EWRRV+ NLDGAF+L+QQ++P M+ +GRI+N +S+AAKTGG+TAGTAY+VSKGA+S+LTFSLARE A G+T N +APAYVKTPM+ +QLTEEQR+++L +IPVGRFCE EE AH VRFL SPL+GFITGE+ID NGG MD Sbjct: 7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVSHERNRALAHELGQHA---LPFSFDISDPVAVGEGHALIVKAFGPVDILVNNAGILSNNKIEATEANEWRRVMGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELASFGVTANAVAPAYVKTPMITEQLTEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247 The following BLAST results are available for this feature:
BLAST of NO01G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01340 ID=NO01G01340|Name=NO01G01340|organism=Nannochloropsis oceanica|type=gene|length=1215bpback to top protein sequence of NO01G01340.1 >NO01G01340.1-protein ID=NO01G01340.1-protein|Name=NO01G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
|