NO01G01290, NO01G01290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G01290 vs. NCBI_GenBank
Match: EWM29091.1 (hypothetical protein Naga_100024g11 [Nannochloropsis gaditana]) HSP 1 Score: 193.0 bits (489), Expect = 5.100e-46 Identity = 82/111 (73.87%), Postives = 99/111 (89.19%), Query Frame = 0 Query: 1 MVEKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTKQILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 +VE+D W+YHT+RE +EG +EEV+GRAMVCCVFVC +WKAAG+ GE EINCGELTNADDVMLA+FRGD +QILG+W+MFLP+FN K+PF HMDEKCP+LGPAY+QP DC Sbjct: 557 IVEEDVWLYHTSRERREGGREEVLGRAMVCCVFVCGIWKAAGLFGEASEEINCGELTNADDVMLALFRGDMRQILGKWKMFLPSFNFKKPFPHMDEKCPSLGPAYQQPLDC 667
BLAST of NO01G01290 vs. NCBI_GenBank
Match: CEP00268.1 (hypothetical protein PBRA_008002 [Plasmodiophora brassicae]) HSP 1 Score: 111.7 bits (278), Expect = 1.500e-21 Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 1 MVEKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIF------------------RGDTKQILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 +VE+D ++Y+TTR K GR+MVCCVFVCA+WKAAG+ G+ GEINC E TN D LA+F D Q+LG ++ L N K PF HM E CP++GPAY +P C Sbjct: 453 LVERDSFVYNTTRFGKPAR-----GRSMVCCVFVCAVWKAAGLFGQHAGEINCAEFTNLDVYALAVFDESRMKDGRPQACKDADPDNDHCQLLGTSQLRLEHVNSKDPFPHMSENCPSVGPAYLRPASC 576
BLAST of NO01G01290 vs. NCBI_GenBank
Match: CEM33381.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 95.1 bits (235), Expect = 1.400e-16 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTKQILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+D W YHT R G +E V+ A VC FVC+M+KA G+ G INC E+ N D L ++ +Q++G M L FN + P HM E+CP+ P Y++P DC Sbjct: 521 EQDHWTYHTKR---NGVEEAVVAPARVCSTFVCSMYKAGGLFGRLADSINCAEVHNFDLYSLTLYADGPRQVMGGHVMQLNEFNSRPPHPHMAERCPSRPPLYQRPLDC 626
BLAST of NO01G01290 vs. NCBI_GenBank
Match: CUG91493.1 (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 87.8 bits (216), Expect = 2.300e-14 Identity = 51/131 (38.93%), Postives = 69/131 (52.67%), Query Frame = 0 Query: 1 MVEKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK-------------------QILGEWEMFL-PAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 +VE+DDW+Y+TT+ +G++MVCCVFVC +WKAAGV G EI C E T D + IF D K Q+ G + + L P N + +AHM E+C +LGPAY + P C Sbjct: 500 IVERDDWLYNTTK-----VGVPAVGKSMVCCVFVCNIWKAAGVFGNLTNEIQCAEQTLWDIFSMQIF-DDAKMGNGRPDICKQYDPTNQLCQLTGNFTLNLKPDVNTRPLYAHMGERCSSLGPAYIREPGC 624
BLAST of NO01G01290 vs. NCBI_GenBank
Match: KZV50677.1 (hypothetical protein F511_29281 [Dorcoceras hygrometricum]) HSP 1 Score: 80.9 bits (198), Expect = 2.800e-12 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK----------------QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+D+W+Y G++ C F+ AM+KAAGV G I E T D ML IF + QILGE++M LP++N +P+A+M+E CP+L P YE+P C Sbjct: 412 EQDEWVYSD-------------GKSTTCVAFILAMYKAAGVFGPVSNSIQVTEFTIRDAYMLKIFENNRTNLPHWCNNDEDQLPFCQILGEYKMELPSYNTLEPYANMNENCPSLPPTYERPARC 523
BLAST of NO01G01290 vs. NCBI_GenBank
Match: PSS13564.1 (Leucine--tRNA ligase [Actinidia chinensis var. chinensis]) HSP 1 Score: 80.1 bits (196), Expect = 4.800e-12 Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK----------------QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+DDW+Y G++ C F+ AM+K AGV G I E T D ML IF + QILGE++M LP +N QP+A+M+E CP+L P YE+P C Sbjct: 409 EQDDWVYSD-------------GKSTTCVAFILAMYKEAGVFGPISESIQVTEFTIRDAYMLKIFENNQTRLPSWCNNEVDQLPFCQILGEYQMELPEYNTLQPYANMNENCPSLPPTYERPARC 520
BLAST of NO01G01290 vs. NCBI_GenBank
Match: XP_012847627.1 (PREDICTED: uncharacterized protein LOC105967570 [Erythranthe guttata] >EYU28651.1 hypothetical protein MIMGU_mgv1a004456mg [Erythranthe guttata]) HSP 1 Score: 79.7 bits (195), Expect = 6.300e-12 Identity = 46/125 (36.80%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIF------------RGDTK----QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+D+W+Y G++ C F+ AM+KAAGV G I E T D ML IF GD K QILGE++M LP +N +P+ +M+E CP+L P YE+P C Sbjct: 415 EQDEWVYSD-------------GKSTTCVAFILAMYKAAGVFGPVTNSIQVTEFTIKDAYMLKIFENNMTQLPNWCNNGDDKLPFCQILGEYKMELPYYNTLEPYTNMNENCPSLPPTYERPARC 526
BLAST of NO01G01290 vs. NCBI_GenBank
Match: XP_004135222.1 (PREDICTED: uncharacterized protein LOC101209749 [Cucumis sativus] >KGN51842.1 hypothetical protein Csa_5G603390 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 8.200e-12 Identity = 43/125 (34.40%), Postives = 60/125 (48.00%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK----------------QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+DDW+Y G++ C F+ AM+K AG+ G I E T D ML IF + QILGE++M LP FN +P+A+M+E CP+L P Y++P C Sbjct: 413 EQDDWVYSD-------------GKSTTCVAFILAMYKEAGIFGPVSSSIQVTEFTIRDAYMLKIFEDNHTRLPTWCNNESDKLPFCQILGEYKMELPQFNTLEPYANMNENCPSLPPTYDRPTQC 524
BLAST of NO01G01290 vs. NCBI_GenBank
Match: XP_010043827.1 (PREDICTED: uncharacterized protein LOC104432932 [Eucalyptus grandis] >KCW85832.1 hypothetical protein EUGRSUZ_B02569 [Eucalyptus grandis]) HSP 1 Score: 79.0 bits (193), Expect = 1.100e-11 Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK----------------QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+DDWMY G++ C F+ AM+K AGV G I E T D ML IF QILGE+ M LP +N +P+A+M+E CP+L P+YE+P C Sbjct: 423 EQDDWMYSD-------------GKSTTCVAFILAMYKEAGVFGPISSSIQVTEFTIRDAYMLKIFENSQTRLPSWCSNKGGQLPYCQILGEYWMELPEYNTIEPYANMNENCPSLPPSYERPKRC 534
BLAST of NO01G01290 vs. NCBI_GenBank
Match: XP_002270582.1 (PREDICTED: uncharacterized protein LOC100251867 [Vitis vinifera] >CBI32078.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 78.6 bits (192), Expect = 1.400e-11 Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 0 Query: 3 EKDDWMYHTTRETKEGEKEEVMGRAMVCCVFVCAMWKAAGVLGEEGGEINCGELTNADDVMLAIFRGDTK----------------QILGEWEMFLPAFNLKQPFAHMDEKCPTLGPAYEQPPDC 112 E+D+W+Y G++ C F+ M+K AG+ G I E T D ML IF + QILGE+ M LP +N +P+AHM+E CP+L P YE+P C Sbjct: 409 EQDEWVYSD-------------GKSTTCVAFILEMYKEAGIFGPASSSIQVTEFTIRDAYMLKIFENNQSRLPSWCGDEDGRLQFCQILGEYRMELPQYNTIEPYAHMNENCPSLPPTYERPVGC 520 The following BLAST results are available for this feature:
BLAST of NO01G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01290 ID=NO01G01290|Name=NO01G01290|organism=Nannochloropsis oceanica|type=gene|length=336bpback to top protein sequence of NO01G01290.1 >NO01G01290.1-protein ID=NO01G01290.1-protein|Name=NO01G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=112bpback to top Synonyms
Publications
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