NO01G00960, NO01G00960 (gene) Nannochloropsis oceanica

Overview
NameNO01G00960
Unique NameNO01G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1711
Alignment locationchr1:242706..244416 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosome biogenesis regulatory protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:242706..244416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0042254ribosome biogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007023Ribosom_reg
Homology
BLAST of NO01G00960 vs. NCBI_GenBank
Match: EWM29024.1 (ribosome biogenesis regulatory protein [Nannochloropsis gaditana])

HSP 1 Score: 464.2 bits (1193), Expect = 3.900e-127
Identity = 248/364 (68.13%), Postives = 283/364 (77.75%), Query Frame = 0
Query:    7 VVKATELIPKAFNGTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGL-VGVGTLAPGAK--------AGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRGAVK 362
            VVKA ++ P A+NG  +  ++K DDLLYDLHHLAAVDSHPVDLE FQ++PEKYL ESATFG+QGI++RLFELPYE SNTGPVV LP ATTYLPRA+ LPEA++ TRWEKFA+EKGIT KKR+R +WDE+AQEWRPRWGY RAK GV D AIVEV PG+DP VDPWT+A+ +K ARV KNL QQAKN+G+  G   LAPG K                       P YGLPVDL  TKKH +AP G    AAS EG KAVPKK+GK AGLKALEVAQ STASLGKFDAKL GEPEKKVK     A VADSK+L+ ESK+MNS+L++VLRPKG   G+GK +HVNIDALEPERAGY+RKKGRGAVK
Sbjct:    8 VVKAVDVAPGAYNGANSAHKDKPDDLLYDLHHLAAVDSHPVDLEGFQSDPEKYLWESATFGVQGIVNRLFELPYEQSNTGPVVTLPGATTYLPRAKPLPEARQATRWEKFAKEKGITKKKRSRTVWDEDAQEWRPRWGYKRAKNGVEDAAIVEVKPGEDPNVDPWTQAQEAKSARVAKNLQQQAKNKGMGRGTSILAPGTKXXXXXXXXXXXXXXXXTAAGPPAPVYGLPVDLPATKKHVQAPGG--PGAASEEGGKAVPKKRGKVAGLKALEVAQQSTASLGKFDAKLAGEPEKKVKKVRKVAPVADSKSLVEESKRMNSVLSTVLRPKGTGPGTGK-SHVNIDALEPERAGYSRKKGRGAVK 368          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: CBJ25930.1 (Ribosome biogenesis regulatory protein homolog [Ectocarpus siliculosus])

HSP 1 Score: 227.3 bits (578), Expect = 8.000e-56
Identity = 152/372 (40.86%), Postives = 203/372 (54.57%), Query Frame = 0
Query:    8 VKATELIPKAFNGTV---AVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPA-ATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKK----VKXXXXXASVADSKALLHESKKMNSIL--TSVLRPKGGSGGSGKTAHVNIDALE-PERAGYARKKGRGAVKGGGKKKK 369
            V A ++ PKAF   V      ++  DDL +DL +L  V+ H VD +    + E+YL   A   +Q +I+RLF LP   S  GPV  LPA   + LPRA+ +P  K ETRW++FA+EKGIT  KR+RM+WD++ +EWRPR GY RA  GV++ AIVEV PG DP+ +PW+EAR  K+ RVEKNL  +AKN             +AGG           G   G+PVDL+P+ K                G    P K+GKA    ALE+ QHSTAS+GKFD +   EPE++    V+      +V   +      K +NS++   S    K G+  S K +    DA+E P  AG  RKKG+GA    GK KK
Sbjct:    3 VAAADIAPKAFEQLVKEGGEHQDVEDDLQFDLRNLLVVNPHQVDEQALADDSEEYLKGQAQAAVQSLINRLFVLPTVPSEVGPVATLPAKEESILPRAKPVPAPKAETRWDRFAKEKGITGSKRSRMVWDDDLKEWRPRHGYKRANDGVLNHAIVEVKPGKDPMANPWSEAREEKKGRVEKNLSNRAKN-----------VERAGG-----------GAKPGIPVDLLPSAK-------------DGSGGGGAPAKRGKANTKGALELVQHSTASMGKFDERRHAEPERRKGKGVRRAFKPVTVGSGEETQGHLKILNSVMIGKSKSADKDGTARSAKESLAAYDAIEGPRDAGAKRKKGKGA---SGKAKK 336          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: OQR95722.1 (ribosome biogenesis regulatory protein [Thraustotheca clavata])

HSP 1 Score: 192.2 bits (487), Expect = 2.900e-45
Identity = 131/327 (40.06%), Postives = 174/327 (53.21%), Query Frame = 0
Query:    8 VKATELIPKAFN-GTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKN-RGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVK-XXXXXASVADSKALLHESKKMNSILTSVLRPKGGSG 332
            +KA E+ P A++ G  +    K DDL YDL +LAA D+HP  ++N     E  +  SA   +Q +I+ +F+LP E ++ GP+  LP  TT +PR + LP+ K ETRWEKFAREKGI NKK+ RM+WDEE Q W PRWGY RA   + D AI  V   DDP  DPWTE + +K  RV+KN+  QA N +   G+    P  KA                 G+PV+L+ T+  +    G        EGTKA            AL+  Q STAS+GKFD    GE E+K K       SV  S+    E ++  S+L  VL  +   G
Sbjct:    3 IKAAEIAPAAYSEGKNSSIVSKQDDLTYDLGNLAAFDTHPFIVKNL--TNENEIKASARDNVQLLINAIFDLPREMTDVGPMSKLPVGTTLIPREKPLPKPKVETRWEKFAREKGIENKKKERMVWDEEKQAWAPRWGYKRANDDIHDWAI-PVKKNDDPYADPWTERKQAKAERVQKNMRNQANNLKNGRGITPSVPVPKA---------------PVGIPVELLDTQDKKTKQRG-------KEGTKA------------ALQKVQFSTASMGKFDKMRQGEAERKQKGKRNKFLSVTGSEQT--EKERSMSVLNHVLGREENKG 290          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: XP_012196977.1 (hypothetical protein SPRG_03005 [Saprolegnia parasitica CBS 223.65] >KDO32528.1 hypothetical protein SPRG_03005 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 190.3 bits (482), Expect = 1.100e-44
Identity = 136/362 (37.57%), Postives = 189/362 (52.21%), Query Frame = 0
Query:    8 VKATELIPKAFN-GTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRGAVKGGGKKKK 369
            +KA E+ P A++ G  +    K+DDL YDL +LAA D+HP  ++N  A+ EK L  SA   +Q +I+++FELP + ++ GP+  LP  TT +PR + LP+ K ETRWEK+AREKG+ NKK+ RM+WDE  Q W PRWGY RA   + D A V V   DDP  DPWTE + +K  RV+KNL  QA N             +AGG +        K    G+PV+++ T   +    G        EGTKA            AL+  Q STAS+GKFD    GE E+K +       ++ + A   E ++   +L  VL   G     GK         E + A   ++K +   KG  K+ K
Sbjct:    3 IKAAEIAPAAYSEGARSSVVAKADDLSYDLGNLAAFDTHPFSVKN--ASDEKELKASARDNVQLLINQIFELPRQMTDMGPMAQLPTGTTVIPREKPLPKPKPETRWEKYAREKGVDNKKKDRMVWDEAKQAWAPRWGYKRANDDMQDWA-VPVKKNDDPFADPWTERKQAKNERVQKNLRNQAAN-----------VKRAGGMQPSVP--VPKATPVGIPVEMLNTSDKKMKQRG-------KEGTKA------------ALQKVQFSTASMGKFDKMRTGEAERK-QTGKRNKFLSVTGAEKTEKERSMHVLNHVL---GREENKGK---AKASTGEDDPAKTKKRKLKNVTKGHAKRAK 322          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: XP_008621047.1 (hypothetical protein SDRG_16609 [Saprolegnia diclina VS20] >EQC25526.1 hypothetical protein SDRG_16609 [Saprolegnia diclina VS20])

HSP 1 Score: 189.5 bits (480), Expect = 1.900e-44
Identity = 136/362 (37.57%), Postives = 191/362 (52.76%), Query Frame = 0
Query:    8 VKATELIPKAFN-GTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRGAVKGGGKKKK 369
            +KA E+ P A++ G  +    K+DDL YDL +LAA D+HP  ++N  A+ EK L  SA   +Q +I+++FELP + ++ GP+  LP  TT +PR + LP+ K ETRWEK+AREKG+ NKK+ RM+WDE  Q W PRWGY RA   + D A V V   DDP  DPWTE + +K  RV+KNL  QA N             +AGG +        K    G+PV+++ T   +    G        EGTKA            AL+  Q STAS+GKFD    GE E+K +       ++ + A   E ++   +L  VL   G     GK A  +    +P +    ++K +   KG  K+ K
Sbjct:    3 IKAAEIAPAAYSEGARSSVVAKADDLSYDLGNLAAFDTHPFSVKN--ASDEKELKASARDNVQLLINQIFELPRQMTDMGPMAQLPTGTTVIPREKPLPKPKPETRWEKYAREKGVDNKKKDRMVWDEAKQAWAPRWGYKRANDDMQDWA-VPVKKNDDPFADPWTERKQAKNERVQKNLRNQAAN-----------VKRAGGMQPSVP--VPKATPVGIPVEMLNTSDKKMKQRG-------KEGTKA------------ALQKVQFSTASMGKFDKMRTGEAERK-QTGKRNKFLSVTGAEKTEKERSMHVLNHVL---GREENKGK-AKASTGEEDPTKT--KKRKLKNVTKGHAKRAK 322          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: OQR98206.1 (ribosome biogenesis regulatory protein [Achlya hypogyna])

HSP 1 Score: 184.9 bits (468), Expect = 4.600e-43
Identity = 137/362 (37.85%), Postives = 188/362 (51.93%), Query Frame = 0
Query:    8 VKATELIPKAFN-GTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRGAVKGGGKKKK 369
            +KA E+ P A++ G       K+DDL YDL +LAA D+HP  ++N     EK +  +A   +Q +I+++F+LP + ++ GP+  LPA +T +PR + LP+ K ETRWEKFAREKGI NKK+ RM+WDE  Q W PRWGY RA   + D A V V   DDP  DPWTE + +K  RV+KNL  QA N  L     + P              A K P  G+PV+++ T       A   A     EGTKA            AL+  Q STAS+GKFD    GE E+K +       ++ + A   E ++  S+L  VL   G     GK      +  EP +     +K +   KG  K+ K
Sbjct:    3 IKAAEIAPAAYSEGAHTSVVAKADDLSYDLGNLAAFDTHPFGVKN--TTDEKEIKAAARENVQLLINQIFDLPRQMTDMGPMAQLPAGSTVIPREKPLPKPKVETRWEKFAREKGIDNKKKDRMVWDEAKQAWAPRWGYKRANDDMNDWA-VPVKKNDDPFADPWTERKQAKAERVQKNLRNQANN--LKNGRGIQPSVPVPS--------APKTP-LGIPVEMLDT-------ADKKAKQRGKEGTKA------------ALQKVQFSTASMGKFDKMRTGEAERK-QTGKRNKFLSVTGAEKTEKERSMSVLNHVL---GREENKGKAKAPTAED-EPAKGKKRGRKLKNVTKGHAKRAK 326          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: XP_008874632.1 (hypothetical protein H310_10139 [Aphanomyces invadans] >ETV96855.1 hypothetical protein H310_10139 [Aphanomyces invadans])

HSP 1 Score: 183.3 bits (464), Expect = 1.300e-42
Identity = 139/369 (37.67%), Postives = 186/369 (50.41%), Query Frame = 0
Query:    7 VVKATELIPKAFNGTVAVPE-EKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKK-VKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRG-----AVKGGGKKKK 369
            VVKA E+ P A++   +     K DDL YDL +LAA D+HP  ++N   + E  L   A   +Q +I+ +FELP + ++ GP+  LP  TT +PR + LP+ K ETRWEKFAREKGI NKK  RM+WDE  Q W P+WGY RA     D A + V  G DP  DPWTE +  K  RV+KNL  QA N             K G  +GK+          G+PV+L+ T   +    G        EGTKA            AL+  Q STAS+GKFD K  GE E+K V       SV  S+    E ++  ++L  +L  +   G +   +H   D  + +  G   KK  G       KG  K++K
Sbjct:    2 VVKAAEIAPAAYSSNKSSSAVTKEDDLTYDLGNLAAYDTHPFQVKNL--SDENELKAYARDSVQLLINHVFELPRQMTDMGPMAQLPVPTTVIPREKPLPKEKVETRWEKFAREKGIKNKKEGRMVWDEAKQIWAPKWGYKRANDDSGDWA-MPVKAGADPYADPWTEKKQEKAERVQKNLRNQANN------------LKQG--RGKQPAFPVSKTPLGVPVELLNTDDKKLKQRG-------KEGTKA------------ALQKVQFSTASMGKFDKKREGEGERKHVGKRNKFLSVTGSEKT--EKERSMNVLQHLLGREENKGKAKAASH--SDGGDDDVGGKKGKKRGGPKLKNITKGAAKRQK 330          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: GAX99459.1 (Hypothetical protein PINS_007320 [Pythium insidiosum])

HSP 1 Score: 183.3 bits (464), Expect = 1.300e-42
Identity = 123/295 (41.69%), Postives = 165/295 (55.93%), Query Frame = 0
Query:    1 MPAKVAVVKATELIPKAFNGTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVK 296
            M A   VVKA E+ P A+        +K DDL YDL +LAA D+HP + +N     EK L   A   +Q +I+ +F+LP E S+ GP+  LPA    +PR + LP+ K ET+WEKFA++KGI  +K+ RM++DE   EW P WGY RA   + D AI EV  G+    DPWT+ + +KRARVEKN+ QQ  N             K G  +GK+   +AK PA G+PV+LM                 S +  KA  K++GK   +K L+  Q STAS+GKFD    GE E+K K
Sbjct:    1 MAATTVVVKAQEIAPAAYAAANTSDVKKEDDLTYDLGNLAAFDTHPFEYKN-----EKELALHARENVQLLINHIFDLPREMSDMGPMAQLPAPELTIPREKPLPKPKVETKWEKFAKDKGIQKRKKGRMVFDEATGEWAPAWGYKRAGDDLKDWAI-EVKEGETE--DPWTKRKQAKRARVEKNVKQQLNN------------LKNG--RGKQTNGSAKAPA-GIPVELM-----------------STDDVKA--KQRGKDGTMKTLQKVQFSTASMGKFDKMREGEMERKQK 253          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: CCA18239.1 (ribosome biogenesis regulatory protein putative [Albugo laibachii Nc14])

HSP 1 Score: 181.4 bits (459), Expect = 5.000e-42
Identity = 113/288 (39.24%), Postives = 155/288 (53.82%), Query Frame = 0
Query:    8 VKATELIPKAFNGTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVK 296
            +KA E+ P A+        +K DDL YDL +LAA D+HP    N     EK L       +Q +++RLF LP   ++ GP+  LP  TT +PR + LP+   ET+WEKFA+EKGI  +K++RM++DE AQ+W+P WGY RA   + D A VE   G++ L DPW + + +K+ARVEKN+ QQA N G  GV                                      +K P+G A   A     KA  K++GK   +K L+ AQ STAS+GKFD+   GE E+K K
Sbjct:    3 LKAAEVAPAAYANKKNSDVKKEDDLEYDLGNLAAFDTHPYKYTN-----EKDLALFTRENVQLLVNRLFTLPRTITDAGPLAKLPPPTTIIPREKPLPKPNAETKWEKFAKEKGIQKRKKSRMVFDEAAQDWKPNWGYKRANDNLQDWA-VEAKTGENALADPWAKRKQAKKARVEKNIKQQAANVGRGGV--------------------------------------DKIPSGIAVELAGTSDVKA--KQRGKEGTMKTLQKAQFSTASMGKFDSMRYGETERKQK 244          
BLAST of NO01G00960 vs. NCBI_GenBank
Match: XP_009536175.1 (hypothetical protein PHYSODRAFT_526169 [Phytophthora sojae] >EGZ08003.1 hypothetical protein PHYSODRAFT_526169 [Phytophthora sojae])

HSP 1 Score: 181.0 bits (458), Expect = 6.600e-42
Identity = 132/362 (36.46%), Postives = 183/362 (50.55%), Query Frame = 0
Query:    7 VVKATELIPKAFNGTVAVPEEKSDDLLYDLHHLAAVDSHPVDLENFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPRAQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKGGVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGTLAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASAEGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKXXXXXASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAGYARKKGRGAVKGGGKKKK 369
            VVKA+E+ P A+        +K DDL+YDL +LAA D+HP   +N     EK L   A   +Q +I+ +FELP E S+ GP+  LP  +T +PR + LP+ K ET+WEKFA+EKGI  +K++R ++DE   EW   WGY RA   + D A VEV  GD  + DPWT+ +  KRARV+KNL  QA N                GR  +   +A + P  G+PV+LM T                     A  K++GK    K LE  Q STAS+GKFD    GE E+K+K                + + MN++   + R +      GKT +   +A E        KK +   KG  KK++
Sbjct:    2 VVKASEIAPAAYAVGSTSSVQKEDDLVYDLGNLAAFDTHPFTYQN-----EKELALHARENVQLLINHIFELPREMSDMGPLAQLPEPSTVIPREKPLPKPKVETKWEKFAKEKGIEKRKKSRKVFDENTGEWGHSWGYQRAGDDMKDWA-VEVKEGD--MEDPWTKRKQEKRARVDKNLRAQANN-------------LKQGRGKQLAGIAGRTPT-GIPVELMNT-------------------DDAKAKQRGKEGTNKTLEKVQFSTASMGKFDKMREGESERKIKGKRNHFLPTTGAEATEKERSMNALKRVLGREENAGKNKGKTFNDEEEA-EGXXXXXXXKKLKNITKGAAKKRR 321          
The following BLAST results are available for this feature:
BLAST of NO01G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29024.13.900e-12768.13ribosome biogenesis regulatory protein [Nannochlor... [more]
CBJ25930.18.000e-5640.86Ribosome biogenesis regulatory protein homolog [Ec... [more]
OQR95722.12.900e-4540.06ribosome biogenesis regulatory protein [Thraustoth... [more]
XP_012196977.11.100e-4437.57hypothetical protein SPRG_03005 [Saprolegnia paras... [more]
XP_008621047.11.900e-4437.57hypothetical protein SDRG_16609 [Saprolegnia dicli... [more]
OQR98206.14.600e-4337.85ribosome biogenesis regulatory protein [Achlya hyp... [more]
XP_008874632.11.300e-4237.67hypothetical protein H310_10139 [Aphanomyces invad... [more]
GAX99459.11.300e-4241.69Hypothetical protein PINS_007320 [Pythium insidios... [more]
CCA18239.15.000e-4239.24ribosome biogenesis regulatory protein putative [A... [more]
XP_009536175.16.600e-4236.46hypothetical protein PHYSODRAFT_526169 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008281NSK008281Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00960.1NO01G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576113gene_71Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100071g22gene1589Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00960.1NO01G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00960 ID=NO01G00960|Name=NO01G00960|organism=Nannochloropsis oceanica|type=gene|length=1711bp
AAACACACAGGGCGTCTCGACCCCCACCATCATCATGCCCGCGAAAGTTG
CTGTGGTCAAGGCCACGGAACTGATACCCAAGGCGTTCAATGGCACGGTT
GCAGTCCCCGAGGAGAAGTCTGATGATCTGTTGTACGACCTGCATCACTT
GGCGGCCGTCGATTCCCATCCAgtaagctcttgtgtgaggtgtgcgtgtg
tgcttgcggtccctgttaccaagatactgcccaacttaccctccaccccc
ttgatagttttttacgcgagaattcacggcatgttcgcaggctttcaaga
aaaaggaggggggctgtactcgaacaatttgtcttgtccctgtgacagtc
ttaaccccgctgaaaacatccaacctcactcctctcgctccctcattcaa
tctccgtcgccatcccagaggataacttgctggaaaacgtccccaccagg
gaggcacgttgttccacttcataacctgacatctctttcactccctgcct
tctttctgcttagGTCGACCTCGAAAATTTTCAAGCCAATCCGGAAAAGT
ACCTGTTGGAAAGTGCCACCTTTGGCCTTCAAGGCATCATCGACCGCCTC
TTTGAATTGCCTTATGAGTCTTCCAACACTGGCCCCGTCGTGGCCTTACC
TGCAGCCACCACCTATCTTCCCCGCGCTCAACGCCTTCCAGAGGCAAAGA
AGGAAACTCGATGGGAGAAATTCGCCAGGGAGAAGGGGATCACGAACAAA
AAGCGGGCACGAATGCTGTGGGATGAAGAGGCGCAGGAGTGGCGACCTCG
ATGGGGATATAATCGAGCAAAGGGTGGAGTGATGGATCAAGCGATTGTAG
AAGTCATGCCTGGGGATGATCCGCTTGTGGATCCCTGGACGGAGGCAAGG
AATAGCAAGAGGGCACGGGTGGAAAAGAACTTGATGCAGCAGGCTAAGAA
CAGGGGACTGGTAGGCGTGGGGACGTTGGCGCCGGGGGCGAAGGCAGGAG
GGAGAAAGGGGAAGAAGGAAAGGTTGGCAGCGAAGGGACCGGCGTATGGG
TTGCCTGTGGATTTGATGCCCACGAAGAAGCACGAGAAGGCACCTGCTGG
TACTGCTGCTGCTGCTGCTTCTGCGGAGGGCACAAAGGCAGTTCCAAAGA
AGAAGGGAAAGGCCGCAGGTTTGAAAGCGTTGGAGGTGGCGCAACACTCG
ACGGCATCACTGGGAAAGTTTGACGCGAAGCTGGTGGGGGAGCCAGAGAA
GAAGGTGAAGAAGGTCAGAAAGGTTGCGTCAGTTGCGGATAGCAAGGCCT
TGCTTCACGAATCGAAAAAGATGAATTCGATTTTGACTTCGGTATTGCGG
CCGAAAGGTGGGAGTGGGGGCAGTGGGAAGACAGCCCATGTGAATATTGA
TGCGTTGGAGCCGGAGAGGGCGGGGTATGCGAGGAAGAAGGGGCGGGGGG
CGGTAAAAGGTGGTGGAAAGAAGAAGAAGTAAGGTGCTGGCATGGAATGT
GCTGCTGGGAGGGGGCTGATATGGGGAAAGAGGAAAAACGGACAATATCT
CAAGGGAACGATGAACAAGAGTGATGCGACGAAGGGGAGAGGGGGAAAGA
TGAAAAGAGAATTTTGTGTTTTCCGCACACACGTTAGAAAGCCAAATTAA
GTAATAGGAGAAATGATATTGTTTGCAAAGTCAAAGAACCAATAGGAAAG
TAAGAGGGAGA
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protein sequence of NO01G00960.1

>NO01G00960.1-protein ID=NO01G00960.1-protein|Name=NO01G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MPAKVAVVKATELIPKAFNGTVAVPEEKSDDLLYDLHHLAAVDSHPVDLE
NFQANPEKYLLESATFGLQGIIDRLFELPYESSNTGPVVALPAATTYLPR
AQRLPEAKKETRWEKFAREKGITNKKRARMLWDEEAQEWRPRWGYNRAKG
GVMDQAIVEVMPGDDPLVDPWTEARNSKRARVEKNLMQQAKNRGLVGVGT
LAPGAKAGGRKGKKERLAAKGPAYGLPVDLMPTKKHEKAPAGTAAAAASA
EGTKAVPKKKGKAAGLKALEVAQHSTASLGKFDAKLVGEPEKKVKKVRKV
ASVADSKALLHESKKMNSILTSVLRPKGGSGGSGKTAHVNIDALEPERAG
YARKKGRGAVKGGGKKKK*
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Synonyms
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